Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000439

Physical Location & Seq

Genomic Coordinates Reverse (-)

4244850 .. 4249769

Gene Structure 4920 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G002670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGCCCAATTTCTTTACATATTCTGGGGAAGCAAACAGAGAGCTGCTTCGGTATACTAATCAGAAACTCGTGGTGTTCGATGAGCAGAAGGGACTAAAATTTCACCCCCTAAGCTTCAAATCCAACAAAGTAGCACTTCAATGCTCTGGAGCAAAAAGAGCACTGACCTTTGAATTAGTATTAATCAAGTGTTCATCAACTTCTGCACTGACCATGGCTCCCAATAAAACACAGATTGCTAATGCTTTTAAAGCATCAAAGGCCTTGGGAATTAGTACTGAAGAAATCAGACCTGTCCTCAGAGACTTGTACAAATCTTTTCACAAGAATTGGGAGCATATTGAAGCAGACAACTACAGGGTTCTATTTGATAGATACTTCGAAATGCAGGAGAATAAGGGAGAAGCAGAAAAGAGAGATGAAAGACCAGGTAAAGCAGTGCATTTGGCTGAGGGAGACCAGGTTTCTAAAAGAACTGGATCAAGTTTTGAACTGCCCCTCAAACATTCCACTCACAGTGGAAATGTCCAATTTCCCCGTCATGTGGCCTCTGGAAATGGAAGAGTACACCCTGAAAGAGCATCAGCAGTCTCGCTTACGAGTCACACAAACTACTTCATGAAGCCAAAGAATGAGGGATCCACAAATGACGCTATAGTTTCTGCAGAACAGACCTCAATGAGACGTCCAGGACCAATGAACGGAGCTGCTAGAATACAACGACCTAAGACAGACTCAAATGGTGCATCCATTTCTCGTGAGGACAAGAAGTCAATCATTTATAAATCAGACATAACCAAATCAACTGAAAAAGTGCCAATATCCTTAGTAGATGATGTTGGGATTGAGAGCTTGCCAAAGTTCAATTACATCCCACAAAACATCATATACCAAAATGCGAATCTGAATATTTCACTGTCTCGCATTGCGGATGAGGATTGCTGCCCAGATTGTTTTGGAGATTGTCTTTCAGCAGCATTTCCTTGCGCATGTGCTCGTGAAACTGGTGGGGAGTTTGTGTACACACCAGAAGGCCTACTGAAAGAAGATTTTCTAAGTAACCGTATGGCTCTGGTGAGGGAACCGGATAAGCAACCTCATGTTTATTGTCAAGACTGTCCTATTGAGAGGTCTAAGAATGAAGACATGCCTGAAAAATGCAAAGGACACGTGGTCAGGAGGTTTATCAAAGAATGCTGGAGAAAATGTGGATGCGACATGCAGTGTGGAAATCGTGTTGTACAAAGGGGAATTTCGTGCAAGTTGCAGGTGTTCTGGACTCCTCAAGGAAAAGGCTGGGGAGTTAGAACCTTAGAGGTCTTAGAGAAAGGATCATTTGTCTGTGAATATGTCGGGGAGATAATGACTAACACAGAGTTATATGAGCGGAATATGGAAAGCACTGGTAGTGAGAGACATACATACCCCGTGACACTAGATGCAGATTGGGGGTCAGAACAAATTTTGAGGGATGAGGATGCCCTCTGTCTGGATGCGACGCTTCACGGCAATGTTGCAAGGTTCATCAATCATAGATGCTTTGACGCAAACTTGGTTGATATCCCAGTTCAAGTGGAAACTCCTGACCGCCATTATTATCATCTTGCCTTCTTTACTACCAAGAAAGTGAATGCCTTTGAAGAGTTGAATTGGGTGAGTGGGCTTGCTTTAATTTATGGTACCTCCCTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005911 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009506 GO:0009987 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0030054 GO:0031974 GO:0031981 GO:0032259 GO:0034968 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0051276 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

564

Amino Acids

63.77

Weight (kDa)

7.2

Isoelectric Point (pI)

33.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	76 - 132	4.7e-15	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	267 - 412	1.1e-12	Pre-SET motif
SET	PF00856	432 - 549	1.9e-14	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca	FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica	MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica	Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis	pycom02g22720 pycom04g20520
rosa_chinensis	RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata	RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora	Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa	Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha	Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana	Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
AarI	CACCTGC	1 cut(s)	1258
AatII	GACGTC	1 cut(s)	688
Acc16I	TGCGCA	1 cut(s)	988
Acc36I	ACCTGC	1 cut(s)	1258
Acc65I	GGTACC	1 cut(s)	1679
AccB1I	GGYRCC	1 cut(s)	1679
AccBSI	CCGCTC	1 cut(s)	1387
AccI	GTMKAC	1 cut(s)	53
AciI	CCGC	3 cut(s)	929, 1387, 1588
AclWI	GGATC	4 cut(s)	487, 633, 646, 1339
AcsI	RAATTY	3 cut(s)	98, 1251, 1461
AcuI	CTGAAG	1 cut(s)	300
AcvI	CACGTG	1 cut(s)	1171
AcyI	GRCGYC	1 cut(s)	685
AfaI	GTAC	6 cut(s)	277, 311, 567, 1022, 1242, 1681
AfiI	CCNNNNNNNGG	3 cut(s)	544, 701, 1489
AflIII	ACRYGT	1 cut(s)	1168
AgsI	TTSAA	9 cut(s)	118, 140, 173, 344, 491, 865, 1571, 1640, 1648
AhdI	GACNNNNNGTC	2 cut(s)	769, 1172
AjnI	CCWGG	3 cut(s)	427, 459, 688
AluBI	AGCT	4 cut(s)	43, 114, 707, 852
AluI	AGCT	4 cut(s)	43, 114, 707, 852
Alw21I	GWGCWC	2 cut(s)	163, 997
Alw26I	GTCTC	6 cut(s)	297, 450, 595, 676, 924, 1408
AlwI	GGATC	4 cut(s)	487, 633, 646, 1339
AoxI	GGCC	3 cut(s)	261, 546, 1033
ApeKI	GCWGC	4 cut(s)	43, 707, 942, 974
ApoI	RAATTY	3 cut(s)	98, 1251, 1461
AseI	ATTAAT	1 cut(s)	182
Asp700I	GAANNNNTTC	1 cut(s)	1050
Asp718I	GGTACC	1 cut(s)	1679
AspLEI	GCGC	1 cut(s)	989
AspS9I	GGNCC	1 cut(s)	692
AsuHPI	GGTGA	3 cut(s)	95, 1087, 1666
AsuII	TTCGAA	1 cut(s)	381
AvaII	GGWCC	1 cut(s)	692
BamHI	GGATCC	1 cut(s)	638
BanI	GGYRCC	1 cut(s)	1679
BauI	CACGAG	3 cut(s)	68, 756, 996
BbrPI	CACGTG	1 cut(s)	1171
BbsI	GAAGAC	1 cut(s)	1149
Bbv12I	GWGCWC	2 cut(s)	163, 997
BbvCI	CCTCAGC	1 cut(s)	450
BbvI	GCAGC	4 cut(s)	30, 694, 929, 986
BceAI	ACGGC	1 cut(s)	1522
BciT130I	CCWGG	3 cut(s)	429, 461, 690
BcoDI	GTCTC	6 cut(s)	297, 450, 595, 676, 924, 1408
BfaI	CTAG	2 cut(s)	711, 1436
BfmI	CTRYAG	3 cut(s)	355, 654, 663
BfuAI	ACCTGC	1 cut(s)	1258
BisI	GCNGC	4 cut(s)	44, 708, 943, 975
BlsI	GCNGC	4 cut(s)	45, 709, 944, 976
BmcAI	AGTACT	1 cut(s)	277
Bme1390I	CCNGG	3 cut(s)	429, 461, 690
Bme18I	GGWCC	1 cut(s)	692
BmeRI	GACNNNNNGTC	2 cut(s)	769, 1172
BmgT120I	GGNCC	1 cut(s)	692
BmiI	GGNNCC	4 cut(s)	219, 640, 1083, 1681
BmrFI	CCNGG	3 cut(s)	429, 461, 690
BmrI	ACTGGG	1 cut(s)	1559
BmsI	GCATC	8 cut(s)	263, 590, 755, 1202, 1429, 1468, 1483, 1526
BmuI	ACTGGG	1 cut(s)	1559
BpiI	GAAGAC	1 cut(s)	1149
BpmI	CTGGAG	2 cut(s)	168, 1219
Bpu10I	CCTNAGC	2 cut(s)	110, 450
Bpu14I	TTCGAA	1 cut(s)	381
BpuEI	CTTGAG	1 cut(s)	1269
BsaAI	YACGTR	1 cut(s)	1171
BsaHI	GRCGYC	1 cut(s)	685
BsaI	GGTCTC	1 cut(s)	450
BsaJI	CCNNGG	2 cut(s)	213, 264
BsaWI	WCCGGW	1 cut(s)	1084
BsaXI	ACNNNNNCTCC	8 cut(s)	202, 232, 447, 477, 1004, 1034, 1192, 1222
Bsc4I	CCNNNNNNNGG	3 cut(s)	544, 701, 1489
Bse1I	ACTGG	4 cut(s)	481, 1009, 1408, 1565
Bse3DI	GCAATG	2 cut(s)	924, 1516
BseBI	CCWGG	3 cut(s)	429, 461, 690
BseDI	CCNNGG	2 cut(s)	213, 264
BseGI	GGATG	7 cut(s)	746, 870, 937, 1217, 1477, 1483, 1498
BseLI	CCNNNNNNNGG	3 cut(s)	544, 701, 1489
BseMI	GCAATG	2 cut(s)	924, 1516
BseMII	CTCAG	2 cut(s)	313, 441
BseNI	ACTGG	4 cut(s)	481, 1009, 1408, 1565
BseRI	GAGGAG	1 cut(s)	1272
BseXI	GCAGC	4 cut(s)	30, 694, 929, 986
BseYI	CCCAGC	1 cut(s)	1296
BsgI	GTGCAG	1 cut(s)	189
BshFI	GGCC	3 cut(s)	263, 548, 1035
BshNI	GGYRCC	1 cut(s)	1679
BsiHKAI	GWGCWC	2 cut(s)	163, 997
BsiSI	CCGG	1 cut(s)	1085
BslFI	GGGAC	1 cut(s)	105
BslI	CCNNNNNNNGG	3 cut(s)	544, 701, 1489
BsmAI	GTCTC	6 cut(s)	297, 450, 595, 676, 924, 1408
BsmBI	CGTCTC	1 cut(s)	676
BsmFI	GGGAC	1 cut(s)	105
BsmI	GAATGC	2 cut(s)	1199, 1636
BsnI	GGCC	3 cut(s)	263, 548, 1035
Bso31I	GGTCTC	1 cut(s)	450
Bsp119I	TTCGAA	1 cut(s)	381
Bsp1286I	GDGCHC	2 cut(s)	163, 997
Bsp1407I	TGTACA	3 cut(s)	309, 1020, 1240
Bsp143I	GATC	3 cut(s)	479, 638, 1331
Bsp19I	CCATGG	1 cut(s)	213
BspACI	CCGC	3 cut(s)	929, 1387, 1588
BspANI	GGCC	3 cut(s)	263, 548, 1035
BspCNI	CTCAG	2 cut(s)	312, 442
BspHI	TCATGA	1 cut(s)	618
BspLI	GGNNCC	4 cut(s)	219, 640, 1083, 1681
BspMAI	CTGCAG	1 cut(s)	667
BspMI	ACCTGC	1 cut(s)	1258
BspPI	GGATC	4 cut(s)	487, 633, 646, 1339
BspT104I	TTCGAA	1 cut(s)	381
BspT107I	GGYRCC	1 cut(s)	1679
BspTNI	GGTCTC	1 cut(s)	450
BsrBI	CCGCTC	1 cut(s)	1387
BsrDI	GCAATG	2 cut(s)	924, 1516
BsrGI	TGTACA	3 cut(s)	309, 1020, 1240
BsrI	ACTGG	4 cut(s)	481, 1009, 1408, 1565
BssECI	CCNNGG	2 cut(s)	213, 264
BssMI	GATC	3 cut(s)	479, 638, 1331
BssNAI	GTATAC	1 cut(s)	54
BssNI	GRCGYC	1 cut(s)	685
BssSI	CACGAG	3 cut(s)	68, 756, 996
BssT1I	CCWWGG	2 cut(s)	213, 264
Bst1107I	GTATAC	1 cut(s)	54
Bst2BI	CACGAG	3 cut(s)	68, 756, 996
Bst2UI	CCWGG	3 cut(s)	429, 461, 690
Bst4CI	ACNGT	4 cut(s)	518, 918, 1064, 1118
Bst6I	CTCTTC	2 cut(s)	556, 1635
BstACI	GRCGYC	1 cut(s)	685
BstAUI	TGTACA	3 cut(s)	309, 1020, 1240
BstBAI	YACGTR	1 cut(s)	1171
BstBI	TTCGAA	1 cut(s)	381
BstC8I	GCNNGC	2 cut(s)	854, 1665
BstDEI	CTNAG	9 cut(s)	110, 299, 450, 726, 826, 1055, 1134, 1312, 1321
BstDSI	CCRYGG	1 cut(s)	213
BstF5I	GGATG	7 cut(s)	746, 870, 937, 1217, 1477, 1483, 1498
BstHHI	GCGC	1 cut(s)	989
BstKTI	GATC	3 cut(s)	482, 641, 1334
BstMAI	GTCTC	6 cut(s)	297, 450, 595, 676, 924, 1408
BstMBI	GATC	3 cut(s)	479, 638, 1331
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 251, 260
BstNI	CCWGG	3 cut(s)	429, 461, 690
BstNSI	RCATGY	3 cut(s)	993, 1150, 1222
BstSCI	CCNGG	3 cut(s)	427, 459, 688
BstSFI	CTRYAG	3 cut(s)	355, 654, 663
BstV1I	GCAGC	4 cut(s)	30, 694, 929, 986
BstV2I	GAAGAC	1 cut(s)	1149
BstX2I	RGATCY	1 cut(s)	638
BstYI	RGATCY	1 cut(s)	638
BstZ17I	GTATAC	1 cut(s)	54
BsuRI	GGCC	3 cut(s)	263, 548, 1035
BtgI	CCRYGG	1 cut(s)	213
BtsCI	GGATG	7 cut(s)	746, 870, 937, 1217, 1477, 1483, 1498
BtsI	GCAGTG	2 cut(s)	444, 1229
BtsIMutI	CAGTG	7 cut(s)	161, 206, 444, 523, 914, 1229, 1401
BveI	ACCTGC	1 cut(s)	1258
Cac8I	GCNNGC	2 cut(s)	854, 1665
CciI	TCATGA	1 cut(s)	618
CfoI	GCGC	1 cut(s)	989
Cfr13I	GGNCC	1 cut(s)	692
CseI	GACGC	3 cut(s)	659, 1507, 1553
CsiI	ACCWGGT	2 cut(s)	427, 459
Csp6I	GTAC	6 cut(s)	276, 310, 566, 1021, 1241, 1680
CviAII	CATG	7 cut(s)	214, 542, 619, 990, 1100, 1147, 1219
CviQI	GTAC	6 cut(s)	276, 310, 566, 1021, 1241, 1680
DdeI	CTNAG	9 cut(s)	110, 299, 450, 726, 826, 1055, 1134, 1312, 1321
DpnI	GATC	3 cut(s)	481, 640, 1333
DpnII	GATC	3 cut(s)	479, 638, 1331
DraI	TTTAAA	1 cut(s)	250
DriI	GACNNNNNGTC	2 cut(s)	769, 1172
Eam1104I	CTCTTC	2 cut(s)	556, 1635
Eam1105I	GACNNNNNGTC	2 cut(s)	769, 1172
EarI	CTCTTC	2 cut(s)	556, 1635
Eco130I	CCWWGG	2 cut(s)	213, 264
Eco147I	AGGCCT	2 cut(s)	263, 1035
Eco31I	GGTCTC	1 cut(s)	450
Eco32I	GATATC	1 cut(s)	1561
Eco47I	GGWCC	1 cut(s)	692
Eco57I	CTGAAG	1 cut(s)	300
Eco72I	CACGTG	1 cut(s)	1171
EcoRII	CCWGG	3 cut(s)	427, 459, 688
EcoRV	GATATC	1 cut(s)	1561
EcoT14I	CCWWGG	2 cut(s)	213, 264
ErhI	CCWWGG	2 cut(s)	213, 264
Esp3I	CGTCTC	1 cut(s)	676
FaeI	CATG	7 cut(s)	217, 545, 622, 993, 1103, 1150, 1222
FalI	AAGNNNNNCTT	2 cut(s)	120, 152
FaqI	GGGAC	1 cut(s)	105
FatI	CATG	7 cut(s)	213, 541, 618, 989, 1099, 1146, 1218
FblI	GTMKAC	1 cut(s)	53
Fnu4HI	GCNGC	4 cut(s)	44, 708, 943, 975
FokI	GGATG	7 cut(s)	733, 857, 944, 1224, 1484, 1490, 1505
Fsp4HI	GCNGC	4 cut(s)	44, 708, 943, 975
FspBI	CTAG	2 cut(s)	711, 1436
FspI	TGCGCA	1 cut(s)	988
GlaI	GCGC	1 cut(s)	988
GluI	GCNGC	4 cut(s)	44, 708, 943, 975
GsaI	CCCAGC	1 cut(s)	1300
GsuI	CTGGAG	2 cut(s)	168, 1219
HaeIII	GGCC	3 cut(s)	263, 548, 1035
HapII	CCGG	1 cut(s)	1085
HgaI	GACGC	3 cut(s)	659, 1507, 1553
HhaI	GCGC	1 cut(s)	989
Hin1I	GRCGYC	1 cut(s)	685
Hin1II	CATG	7 cut(s)	217, 545, 622, 993, 1103, 1150, 1222
Hin6I	GCGC	1 cut(s)	987
HinP1I	GCGC	1 cut(s)	987
HindIII	AAGCTT	1 cut(s)	112
HinfI	GANTC	4 cut(s)	601, 734, 901, 1279
HpaII	CCGG	1 cut(s)	1085
HphI	GGTGA	3 cut(s)	95, 1087, 1666
Hpy166II	GTNNAC	4 cut(s)	54, 568, 1021, 1023
Hpy188I	TCNGA	6 cut(s)	63, 290, 302, 790, 906, 1456
Hpy8I	GTNNAC	4 cut(s)	54, 568, 1021, 1023
Hpy99I	CGWCG	1 cut(s)	1501
HpyAV	CCTTC	3 cut(s)	82, 1025, 1618
HpyCH4III	ACNGT	4 cut(s)	518, 918, 1064, 1118
HpyCH4IV	ACGT	2 cut(s)	685, 1170
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 251, 260
HpyF3I	CTNAG	9 cut(s)	110, 299, 450, 726, 826, 1055, 1134, 1312, 1321
HpySE526I	ACGT	2 cut(s)	685, 1170
Hsp92I	GRCGYC	1 cut(s)	685
Hsp92II	CATG	7 cut(s)	217, 545, 622, 993, 1103, 1150, 1222
HspAI	GCGC	1 cut(s)	987
KpnI	GGTACC	1 cut(s)	1683
Kzo9I	GATC	3 cut(s)	479, 638, 1331
LmnI	GCTCC	4 cut(s)	149, 223, 334, 704
Lsp1109I	GCAGC	4 cut(s)	30, 694, 929, 986
LweI	GCATC	8 cut(s)	263, 590, 755, 1202, 1429, 1468, 1483, 1526
MabI	ACCWGGT	2 cut(s)	427, 459
MaeI	CTAG	2 cut(s)	711, 1436
MaeII	ACGT	2 cut(s)	685, 1170
MaeIII	GTNAC	3 cut(s)	602, 1058, 1429
MalI	GATC	3 cut(s)	481, 640, 1333
MbiI	CCGCTC	1 cut(s)	1387
MboI	GATC	3 cut(s)	479, 638, 1331
MboII	GAAGA	5 cut(s)	293, 573, 1058, 1154, 1652
MflI	RGATCY	1 cut(s)	638
MhlI	GDGCHC	2 cut(s)	163, 997
MlyI	GAGTC	3 cut(s)	610, 728, 1273
MmeI	TCCRAC	1 cut(s)	147
MroXI	GAANNNNTTC	1 cut(s)	1050
MseI	TTAA	3 cut(s)	182, 249, 1670
MslI	CAYNNNNRTG	2 cut(s)	139, 1509
MspI	CCGG	1 cut(s)	1085
MspR9I	CCNGG	3 cut(s)	429, 461, 690
Mva1269I	GAATGC	2 cut(s)	1199, 1636
MvaI	CCWGG	3 cut(s)	429, 461, 690
MwoI	GCNNNNNNNGC	3 cut(s)	158, 251, 260
NcoI	CCATGG	1 cut(s)	213
NdeII	GATC	3 cut(s)	479, 638, 1331
NlaIII	CATG	7 cut(s)	217, 545, 622, 993, 1103, 1150, 1222
NlaIV	GGNNCC	4 cut(s)	219, 640, 1083, 1681
NmuCI	GTSAC	2 cut(s)	602, 1429
NsbI	TGCGCA	1 cut(s)	988
NspI	RCATGY	3 cut(s)	993, 1150, 1222
NspV	TTCGAA	1 cut(s)	381
PagI	TCATGA	1 cut(s)	618
PaqCI	CACCTGC	1 cut(s)	1258
PceI	AGGCCT	2 cut(s)	263, 1035
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	2 cut(s)	1199, 1636
PdmI	GAANNNNTTC	1 cut(s)	1050
PfeI	GAWTC	1 cut(s)	901
PfoI	TCCNGGA	1 cut(s)	688
PkrI	GCNGC	4 cut(s)	45, 709, 944, 976
PleI	GAGTC	3 cut(s)	609, 728, 1273
PmaCI	CACGTG	1 cut(s)	1171
PmlI	CACGTG	1 cut(s)	1171
PpsI	GAGTC	3 cut(s)	609, 728, 1273
Ppu21I	YACGTR	1 cut(s)	1171
PshBI	ATTAAT	1 cut(s)	182
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	3 cut(s)	427, 459, 688
PspCI	CACGTG	1 cut(s)	1171
PspFI	CCCAGC	1 cut(s)	1296
PspGI	CCWGG	3 cut(s)	427, 459, 688
PspN4I	GGNNCC	4 cut(s)	219, 640, 1083, 1681
PspPI	GGNCC	1 cut(s)	692
PstI	CTGCAG	1 cut(s)	667
PsuI	RGATCY	1 cut(s)	638
RsaI	GTAC	6 cut(s)	277, 311, 567, 1022, 1242, 1681
RsaNI	GTAC	6 cut(s)	276, 310, 566, 1021, 1241, 1680
RseI	CAYNNNNRTG	2 cut(s)	139, 1509
SaqAI	TTAA	3 cut(s)	182, 249, 1670
SatI	GCNGC	4 cut(s)	44, 708, 943, 975
Sau3AI	GATC	3 cut(s)	479, 638, 1331
Sau96I	GGNCC	1 cut(s)	692
ScaI	AGTACT	1 cut(s)	277
SchI	GAGTC	3 cut(s)	610, 728, 1273
ScrFI	CCNGG	3 cut(s)	429, 461, 690
SduI	GDGCHC	2 cut(s)	163, 997
SexAI	ACCWGGT	2 cut(s)	427, 459
SfaNI	GCATC	8 cut(s)	263, 590, 755, 1202, 1429, 1468, 1483, 1526
SfcI	CTRYAG	3 cut(s)	355, 654, 663
SfuI	TTCGAA	1 cut(s)	381
SinI	GGWCC	1 cut(s)	692
SmiMI	CAYNNNNRTG	2 cut(s)	139, 1509
SmlI	CTYRAG	1 cut(s)	1284
SmoI	CTYRAG	1 cut(s)	1284
SseBI	AGGCCT	2 cut(s)	263, 1035
SsiI	CCGC	3 cut(s)	929, 1387, 1588
SspI	AATATT	1 cut(s)	910
SspMI	CTAG	2 cut(s)	711, 1436
StuI	AGGCCT	2 cut(s)	263, 1035
StyD4I	CCNGG	3 cut(s)	427, 459, 688
StyI	CCWWGG	2 cut(s)	213, 264
TaaI	ACNGT	4 cut(s)	518, 918, 1064, 1118
TaiI	ACGT	2 cut(s)	688, 1173
TaqI	TCGA	2 cut(s)	78, 381
TatI	WGTACW	5 cut(s)	275, 309, 565, 1020, 1240
TfiI	GAWTC	1 cut(s)	901
Tru1I	TTAA	3 cut(s)	182, 249, 1670
Tru9I	TTAA	3 cut(s)	182, 249, 1670
TscAI	CASTG	7 cut(s)	168, 213, 444, 523, 921, 1229, 1408
TseFI	GTSAC	2 cut(s)	602, 1429
TseI	GCWGC	4 cut(s)	43, 707, 942, 974
Tsp45I	GTSAC	2 cut(s)	602, 1429
TspDTI	ATGAA	7 cut(s)	183, 435, 607, 635, 713, 1155, 1513
TspGWI	ACGGA	1 cut(s)	717
TspRI	CASTG	7 cut(s)	168, 213, 444, 523, 921, 1229, 1408
VpaK11BI	GGWCC	1 cut(s)	692
VspI	ATTAAT	1 cut(s)	182
XapI	RAATTY	3 cut(s)	98, 1251, 1461
XceI	RCATGY	3 cut(s)	993, 1150, 1222
XmiI	GTMKAC	1 cut(s)	53
XmnI	GAANNNNTTC	1 cut(s)	1050
XspI	CTAG	2 cut(s)	711, 1436
ZraI	GACGTC	1 cut(s)	686
ZrmI	AGTACT	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.