Rroxscaffold_5G00340120

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000439
Physical Location & Seq
Reverse (-)
8456557 .. 8462453
5897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00340120.1

Sequence Viewer

Length: 2370 bp
ATGAAGCCAAGAGATCGCAAAATTATAAATGCCTGTAGTGCAATGAAGAGTTTTGGCATTACACCTGCCAAAACAAAGACAGCACTTAAGACACTTCTGAAATTGTATGAAAATAACTGGGAGCTTATCGAAGATGAGAATTACAGAGTACTTTTTGATGCTTTGATGCCAGAGGAACAGTGTGTGGAACCCAAGGGAAAAGAAACTTTGATCCTTGAATCGGAGGGAATGACAACTTCACACAAAAAAGTTCCATCACGGGTCAAAACTGAAGTTTCTGAACTTCCAATCAAGAGATTATTCACAGGACAAGAGGAAAAACATGCATCGTCACTCACCAAATCTTCCTTGGATTCAAATCCATCAAGAAGAGCACATCAGAATGATGGTGATTCTGGTGCATCTCAGCCATTACTGAGAAGAGCCCGCCTAATTAGATGCGGAGAAGAAGCTTTCATCCGTGAATCAAAGCGGGATATGAAGTCAAAGAACAAAGAAGCTCCACCAGATAATAATACTGAAGTTTTTGAACTTCCAACTAAGAGATTATACACAAGACAACAGAAAAAACAGGCATTGTCCCTATCCAAATCATGCATGGAAATACCTCCATCAAGAAGGGCACATCAGAGTGATGATGATCTGTTTACAGATTCTGAAGAAGCTCAACCACTATTGAAAAGAACCCGCCTAAGAGACCAGGAAGGAGAAGCTGTGATCTGCGACTCAAAGGGAGTGATTTATAATAACATCAAAAGTCCATCAAATGGTAACACTGAAGTTGTTGAAGTTCCAACCAATAGATACACAAGACAACGAAAAAAGAAGGCATCCTCTCTCCCCAAATCTTGCGTGGAAACAAGTCTCTCAACAATGGCACATCAGAATGATGGTGGTCTGTTTTATGATTCTGAAGAATCTGAAGAAACTCCACTAATATCTAGAAGAAATCGAAGGAGACACGAGAAAAAGAACGTTTTGGTTTCTGGGAACAAATTGGTTTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGATAGTTCTTCAGATAGTGATGTTTGTAATGTTGATGAAGAAAGATTAGAGGCACTGGATGAGGAACCATTGACTGTGGACAACATAGCTTGTGTTTCAGATATGTCACACCACCAGCCGAAGGACGTTTTGGTTTCTGGGAATAAATTGGATTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGAGAGTTCTTCAGATAATGATGTTTGTAATGTTGATAAAGAAAGATTGGAGGCACTGGATGTGGAACCATTGACTGTGGACAACATAGCTTGTGTTTCAGATATGTCACAGATGGATGATGATGAAGACAGGTTGAAGTTACTGAAAGTAGAACCATTGATTGTGGACAGCAGAAGTTGTGTTTTAGATTCGTCACAGGTTGATGCTGCATCATCTCTTTCAAGGGGAGAAGTGAATATTTCTCTGACTTGTAACCCTTTTCATTTTCCATGTATGGAAGTGGTGGAAGAGAGAAGCATTAAATCATATTGCAATCAAGAATGCTCTTTGGCTATAGGAACTGATTCAATTACTGATGAAAATGCAAGGTTCAGTGAGGTGCCACAGCTACAAAACTCGAAGTCACAAGATGTTCTTGCCATAAAAGATGATTATCAAGGCAGTAATTGCAGTGCTCTAGGATTTCCTACTGAAGTATTTGTATTTCAGAACCTTATCAAGATTGTACCCCATATACCCAGACACATAGATCCTTGTAGATTTGGATGTCTTCACAGTTTAATCGGTTTTCCAATTAAGGATATTGAGAATTTTTTTGGTAAAAGTGGAAAAAGATTAAGGGTTCTCCCGGGCCTGCAATTCTCTAAGTTACGTAAGGTGGAGGCTGCTGAGAATTCAGAAGTTGTAAAGTTATCTGTTTATGTAGATAACATAACTAGAGGGGAAGAAAATTTGAAAATTCCCTTGGAAGGTGGAAGAAATGCTGAAGATCTGTCGACATTCTTTTACATGCCTCAGAATGTAGTTTATAAAAATGCCCATGTGAATTTTGCACTTCGTTGTACATCTAACCAGGCTTGGTGTTCACATTGTTTCGGGAATTGTCTGGCATCACCGGTACCATGTGCCTGTGCTATGCAAACTGCTGGTGGGTTTGCGTACGCACCAGGTGGATCGGTCAAGGATACTTTTATGGAAGAATGTTTATCAGTGATCCAGGAACGTAAACAACACCACTACTTCTATTGTAAAAAGTGCCCTCTTGAAAGTTTTAGGAAGAAAAAAGAGTTCTGGCCCATGCAAAGGCCATTTATTACAGAAATTTGTAAAGGAATGTTGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

789

Amino Acids

88.44

Weight (kDa)

6.15

Isoelectric Point (pI)

61.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 4 - 59 4.1e-18 Ubiquitin-binding WIYLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 26, 744, 2055
AarI CACCTGC 1 cut(s) 73
Acc36I ACCTGC 1 cut(s) 73
Acc65I GGTACC 1 cut(s) 2143
AccB1I GGYRCC 2 cut(s) 1624, 2143
AccB7I CCANNNNNTGG 1 cut(s) 767
AccI GTMKAC 1 cut(s) 2021
AciI CCGC 4 cut(s) 427, 441, 472, 688
AclI AACGTT 1 cut(s) 975
AclWI GGATC 4 cut(s) 205, 1769, 2206, 2233
AcsI RAATTY 6 cut(s) 1834, 1918, 1975, 1983, 2071, 2346
AdeI CACNNNGTG 1 cut(s) 2195
AfaI GTAC 5 cut(s) 150, 1752, 2089, 2145, 2186
AfiI CCNNNNNNNGG 5 cut(s) 220, 767, 1168, 1994, 2328
AflII CTTAAG 1 cut(s) 86
AgeI ACCGGT 1 cut(s) 2140
AjnI CCWGG 4 cut(s) 699, 2097, 2191, 2241
AjuI GAANNNNNNNTTGG 4 cut(s) 1160, 1192, 1973, 2005
AluBI AGCT 8 cut(s) 124, 452, 500, 665, 713, 1136, 1334, 1633
AluI AGCT 8 cut(s) 124, 452, 500, 665, 713, 1136, 1334, 1633
Alw21I GWGCWC 2 cut(s) 376, 1702
Alw26I GTCTC 3 cut(s) 690, 869, 952
AlwI GGATC 4 cut(s) 205, 1769, 2206, 2233
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 1873
AoxI GGCC 3 cut(s) 1876, 2318, 2330
ApeKI GCWGC 2 cut(s) 1451, 1910
ApoI RAATTY 6 cut(s) 1834, 1918, 1975, 1983, 2071, 2346
AsiGI ACCGGT 1 cut(s) 2140
Asp700I GAANNNNTTC 1 cut(s) 1588
Asp718I GGTACC 1 cut(s) 2143
AspS9I GGNCC 2 cut(s) 1876, 2319
AsuC2I CCSGG 2 cut(s) 1874, 1875
AsuHPI GGTGA 3 cut(s) 328, 401, 2130
AvaI CYCGRG 1 cut(s) 1873
BaeGI GKGCMC 2 cut(s) 625, 2285
BanI GGYRCC 2 cut(s) 1624, 2143
BanII GRGCYC 1 cut(s) 427
BauI CACGAG 1 cut(s) 962
BbsI GAAGAC 2 cut(s) 1377, 1787
Bbv12I GWGCWC 2 cut(s) 376, 1702
BbvI GCAGC 2 cut(s) 1438, 1897
BccI CCATC 7 cut(s) 262, 370, 380, 619, 769, 884, 1351
BciT130I CCWGG 4 cut(s) 701, 2099, 2193, 2243
BciVI GTATCC 1 cut(s) 2203
BcnI CCSGG 2 cut(s) 1874, 1875
BcoDI GTCTC 3 cut(s) 690, 869, 952
BfaI CTAG 5 cut(s) 942, 1046, 1244, 1703, 1962
BfmI CTRYAG 2 cut(s) 34, 1578
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 1 cut(s) 73
BfuI GTATCC 1 cut(s) 2203
BglII AGATCT 1 cut(s) 2014
BisI GCNGC 2 cut(s) 1452, 1911
BlsI GCNGC 2 cut(s) 1453, 1912
BmcAI AGTACT 1 cut(s) 150
Bme1390I CCNGG 6 cut(s) 701, 1874, 1875, 2099, 2193, 2243
BmeT110I CYCGRG 1 cut(s) 1873
BmgT120I GGNCC 2 cut(s) 1876, 2319
BmiI GGNNCC 5 cut(s) 189, 1113, 1311, 1626, 2145
BmrFI CCNGG 6 cut(s) 701, 1874, 1875, 2099, 2193, 2243
BmrI ACTGGG 1 cut(s) 127
BmsI GCATC 9 cut(s) 148, 156, 335, 410, 428, 839, 1438, 1463, 2144
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 2 cut(s) 1377, 1787
BpuMI CCSGG 2 cut(s) 1874, 1875
BsaAI YACGTR 1 cut(s) 1898
BsaBI GATNNNNATC 3 cut(s) 357, 639, 1677
BsaI GGTCTC 1 cut(s) 690
BsaJI CCNNGG 4 cut(s) 192, 348, 1873, 1989
BsaWI WCCGGW 1 cut(s) 2140
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 5 cut(s) 220, 767, 1168, 1994, 2328
Bse118I RCCGGY 1 cut(s) 2140
Bse1I ACTGG 3 cut(s) 122, 1107, 1305
Bse3DI GCAATG 1 cut(s) 48
Bse8I GATNNNNATC 3 cut(s) 357, 639, 1677
BseBI CCWGG 4 cut(s) 701, 2099, 2193, 2243
BseDI CCNNGG 4 cut(s) 192, 348, 1873, 1989
BseGI GGATG 6 cut(s) 456, 830, 1111, 1309, 1366, 1796
BseJI GATNNNNATC 3 cut(s) 357, 639, 1677
BseLI CCNNNNNNNGG 5 cut(s) 220, 767, 1168, 1994, 2328
BseMI GCAATG 1 cut(s) 48
BseMII CTCAG 4 cut(s) 407, 419, 1905, 2054
BseNI ACTGG 3 cut(s) 122, 1107, 1305
BseSI GKGCMC 2 cut(s) 625, 2285
BseXI GCAGC 2 cut(s) 1438, 1897
BshFI GGCC 3 cut(s) 1878, 2320, 2332
BshNI GGYRCC 2 cut(s) 1624, 2143
BshTI ACCGGT 1 cut(s) 2140
BsiHKAI GWGCWC 2 cut(s) 376, 1702
BsiHKCI CYCGRG 1 cut(s) 1873
BsiSI CCGG 2 cut(s) 1874, 2141
BsiWI CGTACG 1 cut(s) 2184
BslFI GGGAC 3 cut(s) 565, 1014, 1212
BslI CCNNNNNNNGG 5 cut(s) 220, 767, 1168, 1994, 2328
BsmAI GTCTC 3 cut(s) 690, 869, 952
BsmFI GGGAC 3 cut(s) 565, 1014, 1212
BsmI GAATGC 3 cut(s) 1008, 1206, 1571
BsnI GGCC 3 cut(s) 1878, 2320, 2332
Bso31I GGTCTC 1 cut(s) 690
BsoBI CYCGRG 1 cut(s) 1873
Bsp1286I GDGCHC 5 cut(s) 376, 427, 625, 1702, 2285
Bsp1407I TGTACA 1 cut(s) 2087
Bsp143I GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
BspACI CCGC 4 cut(s) 427, 441, 472, 688
BspANI GGCC 3 cut(s) 1878, 2320, 2332
BspCNI CTCAG 4 cut(s) 408, 418, 1906, 2053
BspLI GGNNCC 5 cut(s) 189, 1113, 1311, 1626, 2145
BspMI ACCTGC 1 cut(s) 73
BspPI GGATC 4 cut(s) 205, 1769, 2206, 2233
BspQI GCTCTTC 2 cut(s) 364, 415
BspT107I GGYRCC 2 cut(s) 1624, 2143
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 690
BsrDI GCAATG 1 cut(s) 48
BsrFI RCCGGY 1 cut(s) 2140
BsrGI TGTACA 1 cut(s) 2087
BsrI ACTGG 3 cut(s) 122, 1107, 1305
BssAI RCCGGY 1 cut(s) 2140
BssECI CCNNGG 4 cut(s) 192, 348, 1873, 1989
BssMI GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
BssSI CACGAG 1 cut(s) 962
BssT1I CCWWGG 3 cut(s) 192, 348, 1989
Bst2BI CACGAG 1 cut(s) 962
Bst2UI CCWGG 4 cut(s) 701, 2099, 2193, 2243
Bst4CI ACNGT 4 cut(s) 180, 1123, 1321, 1802
Bst6I CTCTTC 4 cut(s) 41, 364, 415, 1527
BstAFI CTTAAG 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 1692
BstAUI TGTACA 1 cut(s) 2087
BstBAI YACGTR 1 cut(s) 1898
BstC8I GCNNGC 2 cut(s) 427, 1880
BstDEI CTNAG 7 cut(s) 405, 416, 540, 692, 1890, 1914, 2040
BstF5I GGATG 6 cut(s) 456, 830, 1111, 1309, 1366, 1796
BstKTI GATC 8 cut(s) 16, 213, 643, 720, 1777, 2017, 2201, 2241
BstMAI GTCTC 3 cut(s) 690, 869, 952
BstMBI GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
BstMWI GCNNNNNNNGC 2 cut(s) 38, 1692
BstNI CCWGG 4 cut(s) 701, 2099, 2193, 2243
BstNSI RCATGY 2 cut(s) 326, 2038
BstSCI CCNGG 6 cut(s) 699, 1872, 1873, 2097, 2191, 2241
BstSFI CTRYAG 2 cut(s) 34, 1578
BstSLI GKGCMC 2 cut(s) 625, 2285
BstSNI TACGTA 1 cut(s) 1898
BstV1I GCAGC 2 cut(s) 1438, 1897
BstV2I GAAGAC 2 cut(s) 1377, 1787
BstX2I RGATCY 2 cut(s) 1774, 2014
BstYI RGATCY 2 cut(s) 1774, 2014
BsuI GTATCC 1 cut(s) 2203
BsuRI GGCC 3 cut(s) 1878, 2320, 2332
BtsCI GGATG 6 cut(s) 456, 830, 1111, 1309, 1366, 1796
BtsI GCAGTG 1 cut(s) 1702
BtsIMutI CAGTG 7 cut(s) 185, 774, 1100, 1298, 1624, 1702, 2241
BveI ACCTGC 1 cut(s) 73
Cac8I GCNNGC 2 cut(s) 427, 1880
CaiI CAGNNNCTG 1 cut(s) 656
Cfr10I RCCGGY 1 cut(s) 2140
Cfr13I GGNCC 2 cut(s) 1876, 2319
Cfr9I CCCGGG 1 cut(s) 1873
CsiI ACCWGGT 1 cut(s) 2191
Csp6I GTAC 5 cut(s) 149, 1751, 2088, 2144, 2185
CspAI ACCGGT 1 cut(s) 2140
CviAII CATG 8 cut(s) 323, 594, 598, 1515, 2035, 2066, 2148, 2323
CviQI GTAC 5 cut(s) 149, 1751, 2088, 2144, 2185
DdeI CTNAG 7 cut(s) 405, 416, 540, 692, 1890, 1914, 2040
DpnI GATC 8 cut(s) 15, 212, 642, 719, 1776, 2016, 2200, 2240
DpnII GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
DraIII CACNNNGTG 1 cut(s) 2195
Eam1104I CTCTTC 4 cut(s) 41, 364, 415, 1527
EarI CTCTTC 4 cut(s) 41, 364, 415, 1527
Eco105I TACGTA 1 cut(s) 1898
Eco130I CCWWGG 3 cut(s) 192, 348, 1989
Eco24I GRGCYC 1 cut(s) 427
Eco31I GGTCTC 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 1873
EcoRI GAATTC 1 cut(s) 1918
EcoRII CCWGG 4 cut(s) 699, 2097, 2191, 2241
EcoT14I CCWWGG 3 cut(s) 192, 348, 1989
EcoT22I ATGCAT 2 cut(s) 328, 599
EcoT38I GRGCYC 1 cut(s) 427
ErhI CCWWGG 3 cut(s) 192, 348, 1989
FaeI CATG 8 cut(s) 326, 597, 601, 1518, 2038, 2069, 2151, 2326
FalI AAGNNNNNCTT 2 cut(s) 1644, 1676
FaqI GGGAC 3 cut(s) 565, 1014, 1212
FatI CATG 8 cut(s) 322, 593, 597, 1514, 2034, 2065, 2147, 2322
FauI CCCGC 3 cut(s) 434, 465, 695
FblI GTMKAC 1 cut(s) 2021
Fnu4HI GCNGC 2 cut(s) 1452, 1911
FokI GGATG 6 cut(s) 443, 817, 1118, 1316, 1373, 1803
FriOI GRGCYC 1 cut(s) 427
Fsp4HI GCNGC 2 cut(s) 1452, 1911
FspBI CTAG 5 cut(s) 942, 1046, 1244, 1703, 1962
GluI GCNGC 2 cut(s) 1452, 1911
HaeIII GGCC 3 cut(s) 1878, 2320, 2332
HapII CCGG 2 cut(s) 1874, 2141
Hin1II CATG 8 cut(s) 326, 597, 601, 1518, 2038, 2069, 2151, 2326
HincII GTYRAC 1 cut(s) 2022
HindII GTYRAC 1 cut(s) 2022
HindIII AAGCTT 1 cut(s) 450
HpaII CCGG 2 cut(s) 1874, 2141
HphI GGTGA 3 cut(s) 328, 401, 2130
Hpy166II GTNNAC 7 cut(s) 648, 1126, 1324, 1411, 2022, 2111, 2252
Hpy8I GTNNAC 7 cut(s) 648, 1126, 1324, 1411, 2022, 2111, 2252
HpyAV CCTTC 6 cut(s) 612, 698, 820, 948, 1162, 1988
HpyCH4III ACNGT 4 cut(s) 180, 1123, 1321, 1802
HpyCH4IV ACGT 4 cut(s) 975, 1173, 1897, 2248
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 1692
HpyF3I CTNAG 7 cut(s) 405, 416, 540, 692, 1890, 1914, 2040
HpySE526I ACGT 4 cut(s) 975, 1173, 1897, 2248
Hsp92II CATG 8 cut(s) 326, 597, 601, 1518, 2038, 2069, 2151, 2326
KpnI GGTACC 1 cut(s) 2147
Kzo9I GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
LguI GCTCTTC 2 cut(s) 364, 415
LmnI GCTCC 2 cut(s) 121, 505
Lsp1109I GCAGC 2 cut(s) 1438, 1897
LweI GCATC 9 cut(s) 148, 156, 335, 410, 428, 839, 1438, 1463, 2144
MabI ACCWGGT 1 cut(s) 2191
MaeI CTAG 5 cut(s) 942, 1046, 1244, 1703, 1962
MaeII ACGT 4 cut(s) 975, 1173, 1897, 2248
MaeIII GTNAC 9 cut(s) 330, 770, 1152, 1350, 1383, 1437, 1496, 1647, 1893
MalI GATC 8 cut(s) 15, 212, 642, 719, 1776, 2016, 2200, 2240
MboI GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
MflI RGATCY 2 cut(s) 1774, 2014
MhlI GDGCHC 5 cut(s) 376, 427, 625, 1702, 2285
MlyI GAGTC 1 cut(s) 719
MmeI TCCRAC 2 cut(s) 560, 818
Mph1103I ATGCAT 2 cut(s) 328, 599
MroXI GAANNNNTTC 1 cut(s) 1588
MseI TTAA 5 cut(s) 87, 1545, 1805, 1821, 1862
MslI CAYNNNNRTG 3 cut(s) 381, 630, 885
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 2 cut(s) 1874, 2141
MspR9I CCNGG 6 cut(s) 701, 1874, 1875, 2099, 2193, 2243
Mva1269I GAATGC 3 cut(s) 1008, 1206, 1571
MvaI CCWGG 4 cut(s) 701, 2099, 2193, 2243
MwoI GCNNNNNNNGC 2 cut(s) 38, 1692
NciI CCSGG 2 cut(s) 1874, 1875
NdeII GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
NlaIII CATG 8 cut(s) 326, 597, 601, 1518, 2038, 2069, 2151, 2326
NlaIV GGNNCC 5 cut(s) 189, 1113, 1311, 1626, 2145
NmuCI GTSAC 5 cut(s) 330, 1152, 1350, 1437, 1647
NsiI ATGCAT 2 cut(s) 328, 599
NspI RCATGY 2 cut(s) 326, 2038
PaqCI CACCTGC 1 cut(s) 73
PciSI GCTCTTC 2 cut(s) 364, 415
PctI GAATGC 3 cut(s) 1008, 1206, 1571
PdmI GAANNNNTTC 1 cut(s) 1588
Pfl23II CGTACG 1 cut(s) 2184
PflMI CCANNNNNTGG 1 cut(s) 767
PfoI TCCNGGA 1 cut(s) 2241
PinAI ACCGGT 1 cut(s) 2140
PkrI GCNGC 2 cut(s) 1453, 1912
PleI GAGTC 1 cut(s) 719
PpsI GAGTC 1 cut(s) 719
Ppu21I YACGTR 1 cut(s) 1898
PsiI TTATAA 3 cut(s) 26, 744, 2055
Psp1406I AACGTT 1 cut(s) 975
Psp6I CCWGG 4 cut(s) 699, 2097, 2191, 2241
PspGI CCWGG 4 cut(s) 699, 2097, 2191, 2241
PspLI CGTACG 1 cut(s) 2184
PspN4I GGNNCC 5 cut(s) 189, 1113, 1311, 1626, 2145
PspPI GGNCC 2 cut(s) 1876, 2319
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 2 cut(s) 1774, 2014
RsaI GTAC 5 cut(s) 150, 1752, 2089, 2145, 2186
RsaNI GTAC 5 cut(s) 149, 1751, 2088, 2144, 2185
RseI CAYNNNNRTG 3 cut(s) 381, 630, 885
SalI GTCGAC 1 cut(s) 2020
SapI GCTCTTC 2 cut(s) 364, 415
SaqAI TTAA 5 cut(s) 87, 1545, 1805, 1821, 1862
SatI GCNGC 2 cut(s) 1452, 1911
Sau3AI GATC 8 cut(s) 13, 210, 640, 717, 1774, 2014, 2198, 2238
Sau96I GGNCC 2 cut(s) 1876, 2319
ScaI AGTACT 1 cut(s) 150
SchI GAGTC 1 cut(s) 719
ScrFI CCNGG 6 cut(s) 701, 1874, 1875, 2099, 2193, 2243
SduI GDGCHC 5 cut(s) 376, 427, 625, 1702, 2285
SexAI ACCWGGT 1 cut(s) 2191
SfaNI GCATC 9 cut(s) 148, 156, 335, 410, 428, 839, 1438, 1463, 2144
SfcI CTRYAG 2 cut(s) 34, 1578
SmaI CCCGGG 1 cut(s) 1875
SmiMI CAYNNNNRTG 3 cut(s) 381, 630, 885
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SnaBI TACGTA 1 cut(s) 1898
SsiI CCGC 4 cut(s) 427, 441, 472, 688
SspI AATATT 1 cut(s) 1483
SspMI CTAG 5 cut(s) 942, 1046, 1244, 1703, 1962
StyD4I CCNGG 6 cut(s) 699, 1872, 1873, 2097, 2191, 2241
StyI CCWWGG 3 cut(s) 192, 348, 1989
TaaI ACNGT 4 cut(s) 180, 1123, 1321, 1802
TaiI ACGT 4 cut(s) 978, 1176, 1900, 2251
TaqI TCGA 4 cut(s) 129, 952, 1643, 2021
TaqII GACCGA 1 cut(s) 2191
TatI WGTACW 2 cut(s) 148, 2087
Tru1I TTAA 5 cut(s) 87, 1545, 1805, 1821, 1862
Tru9I TTAA 5 cut(s) 87, 1545, 1805, 1821, 1862
TscAI CASTG 7 cut(s) 185, 781, 1107, 1305, 1624, 1702, 2241
TseFI GTSAC 5 cut(s) 330, 1152, 1350, 1437, 1647
TseI GCWGC 2 cut(s) 1451, 1910
Tsp45I GTSAC 5 cut(s) 330, 1152, 1350, 1437, 1647
TspDTI ATGAA 9 cut(s) 17, 59, 123, 445, 494, 1098, 1383, 1496, 1617
TspGWI ACGGA 1 cut(s) 449
TspMI CCCGGG 1 cut(s) 1873
TspRI CASTG 7 cut(s) 185, 781, 1107, 1305, 1624, 1702, 2241
Van91I CCANNNNNTGG 1 cut(s) 767
Vha464I CTTAAG 1 cut(s) 86
XapI RAATTY 6 cut(s) 1834, 1918, 1975, 1983, 2071, 2346
XbaI TCTAGA 3 cut(s) 941, 1045, 1243
XceI RCATGY 2 cut(s) 326, 2038
XcmI CCANNNNNNNNNTGG 3 cut(s) 346, 595, 850
XmaI CCCGGG 1 cut(s) 1873
XmiI GTMKAC 1 cut(s) 2021
XmnI GAANNNNTTC 1 cut(s) 1588
XspI CTAG 5 cut(s) 942, 1046, 1244, 1703, 1962
ZrmI AGTACT 1 cut(s) 150
Zsp2I ATGCAT 2 cut(s) 328, 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.