Rw4G004610

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000439
Physical Location & Seq
Reverse (-)
9126369 .. 9130883
4515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G004610.1

Sequence Viewer

Length: 2634 bp
ATGAAGCCAAGAGATCGCAAAATTATAAATGCCTGTAGTGCAATGAAGAGATTTGGCATTACACCTGCCAAAACAAAGACAGCACTTAAGACACTTCTGAAATTGTATGAAAATAACTGGGAGCTTATCGAAGATGAGCATTACAAAGTACTTTTTGATGTTTTGATGCCAGAGGAACAGAGAGTGGAACCCAAGGGAAAAGAAACTTTGATCCTTGAATCAGAGGGAATGACAACTTCTCACAAAAAAGTTCCATCACATGTCAAAACTGAAGTTTCTGAACTTCCAATCAAGACATTATTCACAGGACAAGAGGAAAAACATGCATCGTCACTCTCCAAATCTTCCTTGGATTCAAATCCATCAAGAAGAGCACATCAGAATGATGGTGATTCTGGTGCATCTCAGCCATTACTGAGAAGAGCCCGCCAATTTAGATGCCGAGAAGAAGCTTTCATCCGTGAATCAAAGTTTTTGAACTTCCAACTAAGAGATTATACACAAGACAACAGAAAAAAGCAGGCATTGTCCCTATCCAAATCATGCATGGAAATACCTCCATCAAGAAGGGCACATCAGAGTGATGGTGATCTGTTTACAGATTCTGAAGAAGCTCAACCACTATTGAAAAGACCCCGCCTAAGAGACCAGGAAGGAGAAGCTATGATCTGCGACTCAAAGGGAGTGATTTATAATAACCTCAAAAGTCCATCAAATGGTAAAACTGAAGTTGTTGAAGTTCCAACCAATAGATACACAAGACAACGAAAAAAGAAGGCATCCTCTCTCCCCAAATCTTGCCTGGAAACAAGTCTCTCAACAATGGCACATCAGAATGATGGTGGTCTGTTTTATGATTCTGAAGAATCTGAAGAAACTCCACTAATATCTAGAAGAAATCAGGGGAGACACCAGAAAAAGAACGTTTTGGTTTCTGGGAACAAATTGATTTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGATAGTTCTTCAGATAGTGATGTTTGTAATGTTGATGAAGAAAGATTAGAGGCACTGGATGAGGAACCATTGACTATGGATGATGATGAAGACAGGTTGGAGTTGCTGAAAGTAGAACCATTGATTGTGGACAGCAGAGGTTGTGTTTTAGATTCGTCACAGGTTGATGTTGCATCATTGCTTTCAAAGGGAGAAGTGAATATTTCTCTGACTTGTAACTCTTTTCCACAGTCTGATATTCATTTTCCATGTATGGAAGTGGTGGAAGAGAGAGGCATTAAATCGTATTGCAATCAAGAATGCTCTTTGGCTATAGGAACTGATTCAATTACTGATGAAAATGCAAGGTTCAGAGAGGTTCCCCAGCTACAAAACTCGAATAATTGCAGTGCTCTAGGATTTCCTACTGAAGTATTTGTATTTCAGAATCTTATCAAGATTGTACCCCATATACCCAGACACATAGATCCTTGTAGATTTGGATGTCTTCACAGTTTAATCGGTTTTCCAGTTAAGGATATTGAGAATTTTTTTGGTAAAAGTGGAGAAAGATTAAGGGTTCTCCCAGGCCTGCAATTCTCTAGGTTACATAAGGTGGAGGCTGCTGAGAATTCAGAAGTTGTAAAGTTATTTGTTTATGTAGATAACATAACTAGAGGTGAAGAAAATTTGAAAATTCCCTTGGAAGGTGGAAGAAATGCTGAAGATCTGTCGACATTCTTTTACATGCCTCAGAATGTAGTTTATAAAAATGCCCATGTGAATTTTGCACTTCATTGTACATCTAACCAGGCTTGGTGTTCACGTTGTTTCGGGAATTGTCTGGCATCACCGGTACCATGTGCCTGTGCTATGCAAACTGCGGGTGGGTTTGCGTACGCACCAGGTGGATCGGTCAAGGATACTTTTATGGAAGAATGTTTGTCAGTGATCCAGGAACGTAAACAACACCAGTACTTCTATTGTAAAAAGTGCCCTCTTGAAAGTTTTAGGAAGAAAAAGAGTTCTAGCCCATGCAAAGGCCATTTATTACAGAAATTTGTAAAGGAATGTTGGTCTAAATGTGGATGCAACAAGAACTGTGGGAACCGGATTATTCAACAAGGCATTTCTGTCAAGCTGCAGGTGTTTTTGACACCCGAAGGGAAAGGGTGGGGTCTTCGAACACTGGAGGACTTGCCGAGAGGGGCTTTTGTTTGTGAGTATGTTGGAGAGATACTAACAATCACAGAACTATATGAGCGAAATATGCAAAGTGCTGGTAAGAGGCATTCATACACAGTGCTACTAGATGCAAACTGGCGTTCAAAGGGTGTCTTGAAAGATGAAGAGGCACTTTGCTTAGACGCTACAGTTTATGGAAATGTTGCAAGGTTTATCAACCACAGATGCTCTGATGCTACCTTGGTTCAGATCCCTGTTGAAGTGGAGACTCCTGACCATCACTATTATCATGTTGCCCTTTTCACAACAAGGAATGTTGCTGCTATGGAAGAGCTTACTTGGGACTATGGCATTGACTTTGATGACCATGATCATCCTGTGACGCCATTTCCTTGTCTTTGTGGAAGCCAATTCTGTCGTGGCAGTGACTTCAAAGTTCAAGATGATGTCTTCTTAAGAACATCTTCTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

877

Amino Acids

98.92

Weight (kDa)

6.35

Isoelectric Point (pI)

53.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 4 - 59 1.5e-16 Ubiquitin-binding WIYLD domain
Pre-SET PF05033 551 - 696 3.5e-06 Pre-SET motif
SET PF00856 716 - 837 7.4e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 26, 693, 1743
AarI CACCTGC 2 cut(s) 73, 2110
Acc36I ACCTGC 2 cut(s) 73, 2110
Acc65I GGTACC 1 cut(s) 1831
AccB1I GGYRCC 1 cut(s) 1831
AccB7I CCANNNNNTGG 1 cut(s) 716
AccI GTMKAC 1 cut(s) 1709
AciI CCGC 3 cut(s) 427, 637, 1859
AclI AACGTT 1 cut(s) 924
AclWI GGATC 5 cut(s) 205, 1457, 1894, 1921, 2404
AcsI RAATTY 6 cut(s) 1522, 1606, 1663, 1671, 1759, 2033
AcuI CTGAAG 8 cut(s) 291, 627, 747, 882, 891, 990, 1425, 1719
AcyI GRCGYC 1 cut(s) 2543
AdeI CACNNNGTG 1 cut(s) 1883
AfaI GTAC 6 cut(s) 150, 1440, 1777, 1833, 1874, 1952
AfiI CCNNNNNNNGG 3 cut(s) 716, 1682, 2015
AflII CTTAAG 2 cut(s) 86, 2614
AflIII ACRYGT 1 cut(s) 259
AgeI ACCGGT 1 cut(s) 1828
AjnI CCWGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
AjuI GAANNNNNNNTTGG 2 cut(s) 1661, 1693
AluBI AGCT 7 cut(s) 124, 452, 614, 662, 1363, 2116, 2494
AluI AGCT 7 cut(s) 124, 452, 614, 662, 1363, 2116, 2494
Alw21I GWGCWC 2 cut(s) 376, 1390
Alw26I GTCTC 4 cut(s) 639, 818, 901, 2420
AlwI GGATC 5 cut(s) 205, 1457, 1894, 1921, 2404
AlwNI CAGNNNCTG 1 cut(s) 605
AoxI GGCC 2 cut(s) 1564, 2017
ApeKI GCWGC 3 cut(s) 1598, 2116, 2480
ApoI RAATTY 6 cut(s) 1522, 1606, 1663, 1671, 1759, 2033
AsiGI ACCGGT 1 cut(s) 1828
Asp700I GAANNNNTTC 2 cut(s) 1318, 2623
Asp718I GGTACC 1 cut(s) 1831
AsuHPI GGTGA 4 cut(s) 401, 599, 1667, 1818
AsuII TTCGAA 1 cut(s) 2158
BaeGI GKGCMC 2 cut(s) 574, 1973
BanI GGYRCC 1 cut(s) 1831
BanII GRGCYC 1 cut(s) 427
BbsI GAAGAC 4 cut(s) 1092, 1475, 2147, 2602
Bbv12I GWGCWC 2 cut(s) 376, 1390
BbvI GCAGC 3 cut(s) 1585, 2103, 2467
BccI CCATC 8 cut(s) 262, 370, 380, 568, 578, 718, 833, 2445
BciT130I CCWGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
BciVI GTATCC 1 cut(s) 1891
BclI TGATCA 1 cut(s) 2530
BcoDI GTCTC 4 cut(s) 639, 818, 901, 2420
BfaI CTAG 8 cut(s) 891, 995, 1391, 1578, 1650, 2004, 2285, 2628
BfmI CTRYAG 4 cut(s) 34, 1308, 2117, 2346
BfrI CTTAAG 2 cut(s) 86, 2614
BfuAI ACCTGC 2 cut(s) 73, 2110
BfuI GTATCC 1 cut(s) 1891
BglII AGATCT 1 cut(s) 1702
BisI GCNGC 3 cut(s) 1599, 2117, 2481
BlsI GCNGC 3 cut(s) 1600, 2118, 2482
BmcAI AGTACT 2 cut(s) 150, 1952
Bme1390I CCNGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
BmiI GGNNCC 5 cut(s) 189, 1062, 1356, 1833, 2084
BmrFI CCNGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
BmrI ACTGGG 1 cut(s) 127
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 4 cut(s) 1092, 1475, 2147, 2602
BpmI CTGGAG 1 cut(s) 2186
Bpu14I TTCGAA 1 cut(s) 2158
BsaBI GATNNNNATC 2 cut(s) 357, 588
BsaHI GRCGYC 1 cut(s) 2543
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 5 cut(s) 192, 348, 1561, 1677, 2400
BsaWI WCCGGW 2 cut(s) 1828, 2085
Bsc4I CCNNNNNNNGG 3 cut(s) 716, 1682, 2015
Bse118I RCCGGY 1 cut(s) 1828
Bse1I ACTGG 6 cut(s) 122, 1056, 1505, 1948, 2169, 2300
Bse3DI GCAATG 2 cut(s) 48, 1172
Bse8I GATNNNNATC 2 cut(s) 357, 588
BseBI CCWGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
BseDI CCNNGG 5 cut(s) 192, 348, 1561, 1677, 2400
BseGI GGATG 7 cut(s) 456, 779, 1060, 1081, 1484, 2069, 2533
BseJI GATNNNNATC 2 cut(s) 357, 588
BseLI CCNNNNNNNGG 3 cut(s) 716, 1682, 2015
BseMI GCAATG 2 cut(s) 48, 1172
BseMII CTCAG 4 cut(s) 407, 419, 1593, 1742
BseNI ACTGG 6 cut(s) 122, 1056, 1505, 1948, 2169, 2300
BseSI GKGCMC 2 cut(s) 574, 1973
BseXI GCAGC 3 cut(s) 1585, 2103, 2467
BseYI CCCAGC 1 cut(s) 1359
BshFI GGCC 2 cut(s) 1566, 2019
BshNI GGYRCC 1 cut(s) 1831
BshTI ACCGGT 1 cut(s) 1828
BsiHKAI GWGCWC 2 cut(s) 376, 1390
BsiSI CCGG 2 cut(s) 1829, 2086
BsiWI CGTACG 1 cut(s) 1872
BslFI GGGAC 3 cut(s) 514, 963, 2516
BslI CCNNNNNNNGG 3 cut(s) 716, 1682, 2015
BsmAI GTCTC 4 cut(s) 639, 818, 901, 2420
BsmFI GGGAC 3 cut(s) 514, 963, 2516
BsmI GAATGC 3 cut(s) 957, 1301, 2266
BsnI GGCC 2 cut(s) 1566, 2019
Bso31I GGTCTC 1 cut(s) 639
Bsp119I TTCGAA 1 cut(s) 2158
Bsp1286I GDGCHC 5 cut(s) 376, 427, 574, 1390, 1973
Bsp1407I TGTACA 1 cut(s) 1775
BspACI CCGC 3 cut(s) 427, 637, 1859
BspANI GGCC 2 cut(s) 1566, 2019
BspCNI CTCAG 4 cut(s) 408, 418, 1594, 1741
BspLI GGNNCC 5 cut(s) 189, 1062, 1356, 1833, 2084
BspMAI CTGCAG 1 cut(s) 2121
BspMI ACCTGC 2 cut(s) 73, 2110
BspPI GGATC 5 cut(s) 205, 1457, 1894, 1921, 2404
BspQI GCTCTTC 3 cut(s) 364, 415, 2484
BspT104I TTCGAA 1 cut(s) 2158
BspT107I GGYRCC 1 cut(s) 1831
BspTI CTTAAG 2 cut(s) 86, 2614
BspTNI GGTCTC 1 cut(s) 639
BsrDI GCAATG 2 cut(s) 48, 1172
BsrFI RCCGGY 1 cut(s) 1828
BsrGI TGTACA 1 cut(s) 1775
BsrI ACTGG 6 cut(s) 122, 1056, 1505, 1948, 2169, 2300
BssAI RCCGGY 1 cut(s) 1828
BssECI CCNNGG 5 cut(s) 192, 348, 1561, 1677, 2400
BssNI GRCGYC 1 cut(s) 2543
BssT1I CCWWGG 4 cut(s) 192, 348, 1677, 2400
Bst2UI CCWGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
Bst4CI ACNGT 5 cut(s) 1227, 1490, 2078, 2278, 2350
Bst6I CTCTTC 6 cut(s) 41, 364, 415, 1257, 2319, 2484
BstACI GRCGYC 1 cut(s) 2543
BstAFI CTTAAG 2 cut(s) 86, 2614
BstAUI TGTACA 1 cut(s) 1775
BstBI TTCGAA 1 cut(s) 2158
BstC8I GCNNGC 3 cut(s) 427, 522, 1568
BstDEI CTNAG 7 cut(s) 405, 416, 488, 641, 1602, 1728, 2338
BstF5I GGATG 7 cut(s) 456, 779, 1060, 1081, 1484, 2069, 2533
BstMAI GTCTC 4 cut(s) 639, 818, 901, 2420
BstMWI GCNNNNNNNGC 2 cut(s) 38, 2245
BstNI CCWGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
BstNSI RCATGY 3 cut(s) 263, 326, 1726
BstSCI CCNGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
BstSFI CTRYAG 4 cut(s) 34, 1308, 2117, 2346
BstSLI GKGCMC 2 cut(s) 574, 1973
BstV1I GCAGC 3 cut(s) 1585, 2103, 2467
BstV2I GAAGAC 4 cut(s) 1092, 1475, 2147, 2602
BstX2I RGATCY 3 cut(s) 1462, 1702, 2409
BstYI RGATCY 3 cut(s) 1462, 1702, 2409
BsuI GTATCC 1 cut(s) 1891
BsuRI GGCC 2 cut(s) 1566, 2019
BtsCI GGATG 7 cut(s) 456, 779, 1060, 1081, 1484, 2069, 2533
BtsI GCAGTG 2 cut(s) 1390, 2590
BtsIMutI CAGTG 6 cut(s) 1049, 1390, 1929, 2162, 2283, 2590
BveI ACCTGC 2 cut(s) 73, 2110
Cac8I GCNNGC 3 cut(s) 427, 522, 1568
CaiI CAGNNNCTG 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 1828
CseI GACGC 2 cut(s) 2351, 2551
CsiI ACCWGGT 1 cut(s) 1879
Csp6I GTAC 6 cut(s) 149, 1439, 1776, 1832, 1873, 1951
CspAI ACCGGT 1 cut(s) 1828
CspCI CAANNNNNGTGG 2 cut(s) 2059, 2094
CviQI GTAC 6 cut(s) 149, 1439, 1776, 1832, 1873, 1951
DdeI CTNAG 7 cut(s) 405, 416, 488, 641, 1602, 1728, 2338
DraIII CACNNNGTG 1 cut(s) 1883
Eam1104I CTCTTC 6 cut(s) 41, 364, 415, 1257, 2319, 2484
EarI CTCTTC 6 cut(s) 41, 364, 415, 1257, 2319, 2484
Eco130I CCWWGG 4 cut(s) 192, 348, 1677, 2400
Eco147I AGGCCT 1 cut(s) 1566
Eco24I GRGCYC 1 cut(s) 427
Eco31I GGTCTC 1 cut(s) 639
Eco57I CTGAAG 8 cut(s) 291, 627, 747, 882, 891, 990, 1425, 1719
EcoRI GAATTC 1 cut(s) 1606
EcoRII CCWGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
EcoT14I CCWWGG 4 cut(s) 192, 348, 1677, 2400
EcoT22I ATGCAT 2 cut(s) 328, 548
EcoT38I GRGCYC 1 cut(s) 427
ErhI CCWWGG 4 cut(s) 192, 348, 1677, 2400
FalI AAGNNNNNCTT 5 cut(s) 2297, 2329, 2316, 2348, 2608
FaqI GGGAC 3 cut(s) 514, 963, 2516
FauI CCCGC 3 cut(s) 434, 644, 1852
FbaI TGATCA 1 cut(s) 2530
FblI GTMKAC 1 cut(s) 1709
Fnu4HI GCNGC 3 cut(s) 1599, 2117, 2481
FokI GGATG 7 cut(s) 443, 766, 1067, 1088, 1491, 2076, 2520
FriOI GRGCYC 1 cut(s) 427
Fsp4HI GCNGC 3 cut(s) 1599, 2117, 2481
FspBI CTAG 8 cut(s) 891, 995, 1391, 1578, 1650, 2004, 2285, 2628
GluI GCNGC 3 cut(s) 1599, 2117, 2481
GsaI CCCAGC 1 cut(s) 1363
GsuI CTGGAG 1 cut(s) 2186
HaeIII GGCC 2 cut(s) 1566, 2019
HapII CCGG 2 cut(s) 1829, 2086
HgaI GACGC 2 cut(s) 2351, 2551
Hin1I GRCGYC 1 cut(s) 2543
HincII GTYRAC 1 cut(s) 1710
HindII GTYRAC 1 cut(s) 1710
HindIII AAGCTT 1 cut(s) 450
HpaII CCGG 2 cut(s) 1829, 2086
HphI GGTGA 4 cut(s) 401, 599, 1667, 1818
Hpy166II GTNNAC 5 cut(s) 597, 1126, 1710, 1799, 1940
Hpy8I GTNNAC 5 cut(s) 597, 1126, 1710, 1799, 1940
HpyAV CCTTC 5 cut(s) 561, 647, 769, 1676, 2132
HpyCH4III ACNGT 5 cut(s) 1227, 1490, 2078, 2278, 2350
HpyCH4IV ACGT 3 cut(s) 924, 1801, 1936
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 2245
HpyF3I CTNAG 7 cut(s) 405, 416, 488, 641, 1602, 1728, 2338
HpySE526I ACGT 3 cut(s) 924, 1801, 1936
Hsp92I GRCGYC 1 cut(s) 2543
KpnI GGTACC 1 cut(s) 1835
Ksp22I TGATCA 1 cut(s) 2530
LguI GCTCTTC 3 cut(s) 364, 415, 2484
LmnI GCTCC 1 cut(s) 121
Lsp1109I GCAGC 3 cut(s) 1585, 2103, 2467
MabI ACCWGGT 1 cut(s) 1879
MaeI CTAG 8 cut(s) 891, 995, 1391, 1578, 1650, 2004, 2285, 2628
MaeII ACGT 3 cut(s) 924, 1801, 1936
MaeIII GTNAC 6 cut(s) 330, 1152, 1211, 1581, 2539, 2585
MflI RGATCY 3 cut(s) 1462, 1702, 2409
MhlI GDGCHC 5 cut(s) 376, 427, 574, 1390, 1973
MlyI GAGTC 2 cut(s) 668, 2422
MmeI TCCRAC 4 cut(s) 508, 767, 1074, 2185
Mph1103I ATGCAT 2 cut(s) 328, 548
MroXI GAANNNNTTC 2 cut(s) 1318, 2623
MseI TTAA 6 cut(s) 87, 1275, 1493, 1509, 1550, 2615
MslI CAYNNNNRTG 3 cut(s) 381, 579, 834
MspCI CTTAAG 2 cut(s) 86, 2614
MspI CCGG 2 cut(s) 1829, 2086
MspR9I CCNGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
Mva1269I GAATGC 3 cut(s) 957, 1301, 2266
MvaI CCWGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
MwoI GCNNNNNNNGC 2 cut(s) 38, 2245
NlaIV GGNNCC 5 cut(s) 189, 1062, 1356, 1833, 2084
NmeAIII GCCGAG 2 cut(s) 467, 2202
NmuCI GTSAC 4 cut(s) 330, 1152, 2539, 2585
NsiI ATGCAT 2 cut(s) 328, 548
NspI RCATGY 3 cut(s) 263, 326, 1726
NspV TTCGAA 1 cut(s) 2158
PaqCI CACCTGC 2 cut(s) 73, 2110
PceI AGGCCT 1 cut(s) 1566
PciI ACATGT 1 cut(s) 259
PciSI GCTCTTC 3 cut(s) 364, 415, 2484
PctI GAATGC 3 cut(s) 957, 1301, 2266
PdmI GAANNNNTTC 2 cut(s) 1318, 2623
Pfl23II CGTACG 1 cut(s) 1872
PflMI CCANNNNNTGG 1 cut(s) 716
PfoI TCCNGGA 1 cut(s) 1929
PinAI ACCGGT 1 cut(s) 1828
PkrI GCNGC 3 cut(s) 1600, 2118, 2482
PleI GAGTC 2 cut(s) 668, 2422
PpsI GAGTC 2 cut(s) 668, 2422
PscI ACATGT 1 cut(s) 259
PsiI TTATAA 3 cut(s) 26, 693, 1743
Psp1406I AACGTT 1 cut(s) 924
Psp6I CCWGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
PspFI CCCAGC 1 cut(s) 1359
PspGI CCWGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
PspLI CGTACG 1 cut(s) 1872
PspN4I GGNNCC 5 cut(s) 189, 1062, 1356, 1833, 2084
PstI CTGCAG 1 cut(s) 2121
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 3 cut(s) 1462, 1702, 2409
RsaI GTAC 6 cut(s) 150, 1440, 1777, 1833, 1874, 1952
RsaNI GTAC 6 cut(s) 149, 1439, 1776, 1832, 1873, 1951
RseI CAYNNNNRTG 3 cut(s) 381, 579, 834
SalI GTCGAC 1 cut(s) 1708
SapI GCTCTTC 3 cut(s) 364, 415, 2484
SaqAI TTAA 6 cut(s) 87, 1275, 1493, 1509, 1550, 2615
SatI GCNGC 3 cut(s) 1599, 2117, 2481
ScaI AGTACT 2 cut(s) 150, 1952
SchI GAGTC 2 cut(s) 668, 2422
ScrFI CCNGG 6 cut(s) 650, 803, 1563, 1787, 1881, 1931
SduI GDGCHC 5 cut(s) 376, 427, 574, 1390, 1973
SexAI ACCWGGT 1 cut(s) 1879
SfcI CTRYAG 4 cut(s) 34, 1308, 2117, 2346
SfuI TTCGAA 1 cut(s) 2158
SmiMI CAYNNNNRTG 3 cut(s) 381, 579, 834
SmlI CTYRAG 2 cut(s) 86, 2614
SmoI CTYRAG 2 cut(s) 86, 2614
SseBI AGGCCT 1 cut(s) 1566
SsiI CCGC 3 cut(s) 427, 637, 1859
SspI AATATT 1 cut(s) 1198
SspMI CTAG 8 cut(s) 891, 995, 1391, 1578, 1650, 2004, 2285, 2628
StuI AGGCCT 1 cut(s) 1566
StyD4I CCNGG 6 cut(s) 648, 801, 1561, 1785, 1879, 1929
StyI CCWWGG 4 cut(s) 192, 348, 1677, 2400
TaaI ACNGT 5 cut(s) 1227, 1490, 2078, 2278, 2350
TaiI ACGT 3 cut(s) 927, 1804, 1939
TaqI TCGA 4 cut(s) 129, 1373, 1709, 2158
TaqII GACCGA 1 cut(s) 1879
TatI WGTACW 3 cut(s) 148, 1775, 1950
Tru1I TTAA 6 cut(s) 87, 1275, 1493, 1509, 1550, 2615
Tru9I TTAA 6 cut(s) 87, 1275, 1493, 1509, 1550, 2615
TscAI CASTG 6 cut(s) 1056, 1390, 1929, 2169, 2283, 2590
TseFI GTSAC 4 cut(s) 330, 1152, 2539, 2585
TseI GCWGC 3 cut(s) 1598, 2116, 2480
Tsp45I GTSAC 4 cut(s) 330, 1152, 2539, 2585
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 6 cut(s) 1056, 1390, 1929, 2169, 2283, 2590
Van91I CCANNNNNTGG 1 cut(s) 716
Vha464I CTTAAG 2 cut(s) 86, 2614
XapI RAATTY 6 cut(s) 1522, 1606, 1663, 1671, 1759, 2033
XbaI TCTAGA 2 cut(s) 890, 994
XceI RCATGY 3 cut(s) 263, 326, 1726
XcmI CCANNNNNNNNNTGG 4 cut(s) 346, 544, 799, 2576
XmiI GTMKAC 1 cut(s) 1709
XmnI GAANNNNTTC 2 cut(s) 1318, 2623
XspI CTAG 8 cut(s) 891, 995, 1391, 1578, 1650, 2004, 2285, 2628
ZrmI AGTACT 2 cut(s) 150, 1952
Zsp2I ATGCAT 2 cut(s) 328, 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.