RLG00000009641

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000439
Physical Location & Seq
Forward (+)
55800531 .. 55805204
4674 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009641

Sequence Viewer

Length: 2436 bp
ATGAAGCCAAGAGATCGCAAAATTATAAATGCCTGTAGTGCAATGAAGACATTTGGCATTACACCTGCCAAAACAAAGACAGCACTTAAGACACTTCTGAAATTGTATGAAAATAACTGGGAGCTTATCGAAGATGAGAATTACAGAGTACTTTTTGATGTTTTGATGCCAGAGGAACAGAGAGTGGAACCCAAGGGAAAAGAAACTGTGATCCTTGAATCGGAGGGAGTGATTTATAATAACATCAAAAGTCCATCAAATGGTAAAACTGAAGTTGTTGAAGTTCCAACCAATATATACACAAGACAACAAAAAAAGCAGGCATCCTCTATCCCCAAATCTTGCGTGGAAACAAGTCTCTCAACAATGGCACACCAGAATGATGGTAGTCTGTTTTATAATTCTGAAGAATCTGAAGAAACTCCACTAATATCTAGAAGAAATCAGGGGAGACACCAGAAAAAGAACGTTTTGGTTTCTGGGAATAAATTGGTTTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGATATTTCTTCAGATAGTGATGTTTGTAATGTTGATGACGAAAGATTAGAGGCACTGGATGAGGAACCATTGACTGTGGACAACATAGCTTGTGTTTCTGATATGTCACACCACCAGCCAAAGGACGTTTTGGTTTCTGGGAATAAATTGGATTATGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATACGTCTAGAGAGTTCTTCAGATGGTGATGTCTGTAATGTTGATAAAGGAAGAATGGAGGCACTGGATGTGGAACCATTGACTGTGGACAACATAGCTTGTGTTTCAGATATGTCACAGACGGATGATGATGAAGACAGGTTGGAGCTACTGAAAGTAGAACCATTGATTGTGGACAGCAGAGGTTGTGTTTTAGATTCGTCACAGGTTGATGTTGCGTCATCTCTTTCAAAGGGAGAAGTGAATATTTCTCTGACTTGTAACTCTCTTCCACAGTCTGATATTCAATATATTCAATTTCCATGTATGGAAGTAGTGGAAGAGAGAGGCATTAAATCATATTGTGATCAAGAATGCTCTTTGGCTATAGGAACTGATTCAATTACTGATGAAAATGCAATGTTAAGAGAGGTGCCACAGCTAGAAAACTCGAAGTCACAAGATGTTCTTGCCATAAAAGATGATTATCAAGGCAGTAATTGCGGTGCTCTAGGATTTCCTACTGATGTATTTGTATTTCAGAATCTTATCAAGATTGTACCCCAGATTCCCAGACACATAGATCCTTGTAGATTTGTATGTCTTCACAGTTTAATCGGTTTTCCAACCAAGGATATTGATATTTTTTTTGGTAAAAGTGGAAAAAGATTAAGGGTTCTCCCAGGCCTGCAATTCTGTAAGTTACGTAAGGTGGAGGCTGCTGAGAATTCAGAACTTGTAAAGTTATGTGTTTATGTAGATGACATAACTAGAGGTGAAGAAAAACTGAAAGTTCCTTTGGAAGGTGGAATAAATGCTGAAGATCTGTCAACATTCTTTTACATGCCTCAGAACATAATTTATAAAAATGCCCATGTTAATTTTGCACTTCGCTGTACATCTAACCAGGCTTGTTGTTCACATTGTTCCGGGAATTGTCTGGCATCACCAGTACCATGTGTCTGTGCTATGCAAACTGGGGGTGGGTTTGCTTATGCAGCAGGTGGATTGGTCAAGGATACTTTCATGGAAGAATGTTTGTCAGTGATCCAGGAACGTAAACAACACCACTACTTCTATTGTAAAAAGTGCCCACTTGAAAGTTTTAGGAAGAAAAAGAGTTCTAACCCATGCAAAGGCCATTTATTACAGAAATTTGTAAAGGAATGTTGGTCTAAATGTGGATGCAACAAGAACTGTGGGAGCCGGATTATTCAACAAGGCATTTCTGTCAAGCTGCAGGTGTTTTTGACACCCGAAGGGAAAGGGTGGGGTCTTCGAACACTGGAGGACTTGCCGAGAGGGGCTTTTGTTTGTGAGTATGTTGGAGAGATAGTAACAATCACAGAACTATATGAGCGAAATATGCAAAGTGCTGGTAAGAGGCATTCATACACAGTGCTACTAGATGCAAACTGGCGTTCAAAGGGTGTCTTGAAAGATGAAGAGGCACTTTGCTTAGATGCTACAGTTTATGGAAATGTTGCAAGGTTTATCAACCACAGATGCTCTGATGCTACCTTGATTCAGATCCCTGTTGAAGTGGAGACTCCTAACCATCACTATTATCATGTTGCCCTTTTCACAACAAGGAATGTTGCTGCAATGGAAGAGCTTACTTGGGACTATGGCATTGACTTTGATGACCATGATCATCCTGTGAAGCCATTTCCTTGTCTTTGTGGAAGCCAATTCTGTCGTGGCAGTGACTTCAAAGTTCAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

812

Amino Acids

90.41

Weight (kDa)

5.42

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 4 - 59 2.4e-17 Ubiquitin-binding WIYLD domain
SET PF00856 659 - 780 8.5e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 26, 237, 399, 1572
AarI CACCTGC 3 cut(s) 73, 1700, 1939
Acc36I ACCTGC 3 cut(s) 73, 1700, 1939
AccB1I GGYRCC 1 cut(s) 1141
AccB7I CCANNNNNTGG 1 cut(s) 260
AciI CCGC 1 cut(s) 1212
AclI AACGTT 1 cut(s) 468
AclWI GGATC 4 cut(s) 205, 1286, 1750, 2233
AcsI RAATTY 2 cut(s) 1435, 1862
AcuI CTGAAG 6 cut(s) 291, 426, 435, 534, 732, 1548
AfaI GTAC 4 cut(s) 150, 1269, 1606, 1662
AfiI CCNNNNNNNGG 5 cut(s) 220, 260, 661, 1511, 1844
AflII CTTAAG 1 cut(s) 86
AjnI CCWGG 3 cut(s) 1390, 1614, 1758
AjuI GAANNNNNNNTTGG 2 cut(s) 1490, 1522
AluBI AGCT 7 cut(s) 124, 629, 827, 877, 1150, 1945, 2323
AluI AGCT 7 cut(s) 124, 629, 827, 877, 1150, 1945, 2323
Alw21I GWGCWC 1 cut(s) 1219
Alw26I GTCTC 3 cut(s) 362, 445, 2249
AlwI GGATC 4 cut(s) 205, 1286, 1750, 2233
AoxI GGCC 2 cut(s) 1393, 1846
ApeKI GCWGC 4 cut(s) 1427, 1706, 1945, 2309
ApoI RAATTY 2 cut(s) 1435, 1862
Asp700I GAANNNNTTC 1 cut(s) 1105
AsuC2I CCSGG 1 cut(s) 1639
AsuHPI GGTGA 3 cut(s) 767, 1496, 1647
AsuII TTCGAA 1 cut(s) 1987
BaeGI GKGCMC 1 cut(s) 1802
BanI GGYRCC 1 cut(s) 1141
BbsI GAAGAC 4 cut(s) 53, 870, 1304, 1976
Bbv12I GWGCWC 1 cut(s) 1219
BbvI GCAGC 4 cut(s) 1414, 1718, 1932, 2296
BccI CCATC 4 cut(s) 262, 377, 746, 2274
BciT130I CCWGG 3 cut(s) 1392, 1616, 1760
BciVI GTATCC 1 cut(s) 1720
BclI TGATCA 2 cut(s) 1075, 2359
BcnI CCSGG 1 cut(s) 1639
BcoDI GTCTC 3 cut(s) 362, 445, 2249
BfaI CTAG 7 cut(s) 435, 539, 737, 1151, 1220, 1479, 2114
BfmI CTRYAG 4 cut(s) 34, 1095, 1946, 2175
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 3 cut(s) 73, 1700, 1939
BfuI GTATCC 1 cut(s) 1720
BglII AGATCT 1 cut(s) 1531
BisI GCNGC 4 cut(s) 1428, 1707, 1946, 2310
BlsI GCNGC 4 cut(s) 1429, 1708, 1947, 2311
BmcAI AGTACT 1 cut(s) 150
Bme1390I CCNGG 4 cut(s) 1392, 1616, 1639, 1760
BmiI GGNNCC 5 cut(s) 189, 606, 804, 1143, 1913
BmrFI CCNGG 4 cut(s) 1392, 1616, 1639, 1760
BmrI ACTGGG 2 cut(s) 127, 1695
BmsI GCATC 8 cut(s) 156, 332, 1661, 1883, 2107, 2161, 2204, 2212
BmuI ACTGGG 2 cut(s) 127, 1695
BpiI GAAGAC 4 cut(s) 53, 870, 1304, 1976
BpmI CTGGAG 1 cut(s) 2015
Bpu14I TTCGAA 1 cut(s) 1987
BpuMI CCSGG 1 cut(s) 1639
BsaAI YACGTR 1 cut(s) 1415
BsaBI GATNNNNATC 2 cut(s) 1194, 2237
BsaJI CCNNGG 3 cut(s) 192, 1338, 1390
BsaXI ACNNNNNCTCC 2 cut(s) 2028, 2058
Bsc4I CCNNNNNNNGG 5 cut(s) 220, 260, 661, 1511, 1844
Bse1I ACTGG 7 cut(s) 122, 600, 798, 1658, 1690, 1998, 2129
Bse3DI GCAATG 3 cut(s) 48, 1134, 2319
Bse8I GATNNNNATC 2 cut(s) 1194, 2237
BseBI CCWGG 3 cut(s) 1392, 1616, 1760
BseDI CCNNGG 3 cut(s) 192, 1338, 1390
BseGI GGATG 6 cut(s) 323, 604, 802, 859, 1898, 2362
BseJI GATNNNNATC 2 cut(s) 1194, 2237
BseLI CCNNNNNNNGG 5 cut(s) 220, 260, 661, 1511, 1844
BseMI GCAATG 3 cut(s) 48, 1134, 2319
BseMII CTCAG 2 cut(s) 1422, 1571
BseNI ACTGG 7 cut(s) 122, 600, 798, 1658, 1690, 1998, 2129
BseSI GKGCMC 1 cut(s) 1802
BseXI GCAGC 4 cut(s) 1414, 1718, 1932, 2296
BshFI GGCC 2 cut(s) 1395, 1848
BshNI GGYRCC 1 cut(s) 1141
BsiHKAI GWGCWC 1 cut(s) 1219
BsiSI CCGG 2 cut(s) 1638, 1915
BslFI GGGAC 3 cut(s) 507, 705, 2345
BslI CCNNNNNNNGG 5 cut(s) 220, 260, 661, 1511, 1844
BsmAI GTCTC 3 cut(s) 362, 445, 2249
BsmFI GGGAC 3 cut(s) 507, 705, 2345
BsmI GAATGC 4 cut(s) 501, 699, 1088, 2095
BsnI GGCC 2 cut(s) 1395, 1848
Bsp119I TTCGAA 1 cut(s) 1987
Bsp1286I GDGCHC 2 cut(s) 1219, 1802
Bsp1407I TGTACA 1 cut(s) 1604
Bsp143I GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
BspACI CCGC 1 cut(s) 1212
BspANI GGCC 2 cut(s) 1395, 1848
BspCNI CTCAG 2 cut(s) 1423, 1570
BspLI GGNNCC 5 cut(s) 189, 606, 804, 1143, 1913
BspMAI CTGCAG 1 cut(s) 1950
BspMI ACCTGC 3 cut(s) 73, 1700, 1939
BspPI GGATC 4 cut(s) 205, 1286, 1750, 2233
BspQI GCTCTTC 1 cut(s) 2313
BspT104I TTCGAA 1 cut(s) 1987
BspT107I GGYRCC 1 cut(s) 1141
BspTI CTTAAG 1 cut(s) 86
BsrDI GCAATG 3 cut(s) 48, 1134, 2319
BsrGI TGTACA 1 cut(s) 1604
BsrI ACTGG 7 cut(s) 122, 600, 798, 1658, 1690, 1998, 2129
BssECI CCNNGG 3 cut(s) 192, 1338, 1390
BssMI GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
BssT1I CCWWGG 2 cut(s) 192, 1338
Bst2UI CCWGG 3 cut(s) 1392, 1616, 1760
Bst4CI ACNGT 8 cut(s) 208, 616, 814, 1005, 1319, 1907, 2107, 2179
Bst6I CTCTTC 4 cut(s) 1002, 1044, 2148, 2313
BstAFI CTTAAG 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 1209
BstAUI TGTACA 1 cut(s) 1604
BstBAI YACGTR 1 cut(s) 1415
BstBI TTCGAA 1 cut(s) 1987
BstC8I GCNNGC 2 cut(s) 321, 1397
BstDEI CTNAG 3 cut(s) 1431, 1557, 2167
BstENI CCTNNNNNAGG 1 cut(s) 1509
BstF5I GGATG 6 cut(s) 323, 604, 802, 859, 1898, 2362
BstKTI GATC 8 cut(s) 16, 213, 1078, 1294, 1534, 1758, 2241, 2362
BstMAI GTCTC 3 cut(s) 362, 445, 2249
BstMBI GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
BstMWI GCNNNNNNNGC 4 cut(s) 38, 1209, 1706, 2074
BstNI CCWGG 3 cut(s) 1392, 1616, 1760
BstNSI RCATGY 1 cut(s) 1555
BstSCI CCNGG 4 cut(s) 1390, 1614, 1637, 1758
BstSFI CTRYAG 4 cut(s) 34, 1095, 1946, 2175
BstSLI GKGCMC 1 cut(s) 1802
BstSNI TACGTA 1 cut(s) 1415
BstV1I GCAGC 4 cut(s) 1414, 1718, 1932, 2296
BstV2I GAAGAC 4 cut(s) 53, 870, 1304, 1976
BstX2I RGATCY 3 cut(s) 1291, 1531, 2238
BstXI CCANNNNNNTGG 1 cut(s) 383
BstYI RGATCY 3 cut(s) 1291, 1531, 2238
BsuI GTATCC 1 cut(s) 1720
BsuRI GGCC 2 cut(s) 1395, 1848
BtsCI GGATG 6 cut(s) 323, 604, 802, 859, 1898, 2362
BtsI GCAGTG 1 cut(s) 2419
BtsIMutI CAGTG 6 cut(s) 593, 791, 1758, 1991, 2112, 2419
BveI ACCTGC 3 cut(s) 73, 1700, 1939
Cac8I GCNNGC 2 cut(s) 321, 1397
CseI GACGC 1 cut(s) 936
Csp6I GTAC 4 cut(s) 149, 1268, 1605, 1661
CspCI CAANNNNNGTGG 2 cut(s) 1888, 1923
CviAII CATG 9 cut(s) 1032, 1552, 1583, 1665, 1735, 1839, 2279, 2357, 2433
CviQI GTAC 4 cut(s) 149, 1268, 1605, 1661
DdeI CTNAG 3 cut(s) 1431, 1557, 2167
DpnI GATC 8 cut(s) 15, 212, 1077, 1293, 1533, 1757, 2240, 2361
DpnII GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
Eam1104I CTCTTC 4 cut(s) 1002, 1044, 2148, 2313
EarI CTCTTC 4 cut(s) 1002, 1044, 2148, 2313
Eco105I TACGTA 1 cut(s) 1415
Eco130I CCWWGG 2 cut(s) 192, 1338
Eco147I AGGCCT 1 cut(s) 1395
Eco57I CTGAAG 6 cut(s) 291, 426, 435, 534, 732, 1548
EcoNI CCTNNNNNAGG 1 cut(s) 1509
EcoRI GAATTC 1 cut(s) 1435
EcoRII CCWGG 3 cut(s) 1390, 1614, 1758
EcoT14I CCWWGG 2 cut(s) 192, 1338
ErhI CCWWGG 2 cut(s) 192, 1338
FaeI CATG 9 cut(s) 1035, 1555, 1586, 1668, 1738, 1842, 2282, 2360, 2436
FalI AAGNNNNNCTT 6 cut(s) 1161, 1193, 2126, 2158, 2145, 2177
FaqI GGGAC 3 cut(s) 507, 705, 2345
FatI CATG 9 cut(s) 1031, 1551, 1582, 1664, 1734, 1838, 2278, 2356, 2432
FbaI TGATCA 2 cut(s) 1075, 2359
Fnu4HI GCNGC 4 cut(s) 1428, 1707, 1946, 2310
FokI GGATG 6 cut(s) 310, 611, 809, 866, 1905, 2349
Fsp4HI GCNGC 4 cut(s) 1428, 1707, 1946, 2310
FspBI CTAG 7 cut(s) 435, 539, 737, 1151, 1220, 1479, 2114
GluI GCNGC 4 cut(s) 1428, 1707, 1946, 2310
GsuI CTGGAG 1 cut(s) 2015
HaeIII GGCC 2 cut(s) 1395, 1848
HapII CCGG 2 cut(s) 1638, 1915
HgaI GACGC 1 cut(s) 936
Hin1II CATG 9 cut(s) 1035, 1555, 1586, 1668, 1738, 1842, 2282, 2360, 2436
HincII GTYRAC 1 cut(s) 1539
HindII GTYRAC 1 cut(s) 1539
HinfI GANTC 8 cut(s) 218, 410, 926, 1106, 1252, 1276, 2233, 2257
HpaII CCGG 2 cut(s) 1638, 1915
HphI GGTGA 3 cut(s) 767, 1496, 1647
Hpy166II GTNNAC 6 cut(s) 619, 817, 904, 1539, 1628, 1769
Hpy188III TCNNGA 6 cut(s) 435, 539, 737, 1079, 1261, 2143
Hpy8I GTNNAC 6 cut(s) 619, 817, 904, 1539, 1628, 1769
HpyAV CCTTC 2 cut(s) 1505, 1961
HpyCH4III ACNGT 8 cut(s) 208, 616, 814, 1005, 1319, 1907, 2107, 2179
HpyCH4IV ACGT 5 cut(s) 468, 666, 733, 1414, 1765
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 1209, 1706, 2074
HpyF3I CTNAG 3 cut(s) 1431, 1557, 2167
HpySE526I ACGT 5 cut(s) 468, 666, 733, 1414, 1765
Hsp92II CATG 9 cut(s) 1035, 1555, 1586, 1668, 1738, 1842, 2282, 2360, 2436
Ksp22I TGATCA 2 cut(s) 1075, 2359
Kzo9I GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
LguI GCTCTTC 1 cut(s) 2313
LmnI GCTCC 3 cut(s) 121, 874, 1911
Lsp1109I GCAGC 4 cut(s) 1414, 1718, 1932, 2296
LweI GCATC 8 cut(s) 156, 332, 1661, 1883, 2107, 2161, 2204, 2212
MaeI CTAG 7 cut(s) 435, 539, 737, 1151, 1220, 1479, 2114
MaeII ACGT 5 cut(s) 468, 666, 733, 1414, 1765
MaeIII GTNAC 8 cut(s) 645, 843, 930, 989, 1164, 1410, 2044, 2414
MalI GATC 8 cut(s) 15, 212, 1077, 1293, 1533, 1757, 2240, 2361
MboI GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
MflI RGATCY 3 cut(s) 1291, 1531, 2238
MhlI GDGCHC 2 cut(s) 1219, 1802
MlyI GAGTC 1 cut(s) 2251
MmeI TCCRAC 4 cut(s) 311, 852, 1358, 2014
MroXI GAANNNNTTC 1 cut(s) 1105
MseI TTAA 6 cut(s) 87, 1062, 1133, 1322, 1379, 1587
MslI CAYNNNNRTG 1 cut(s) 378
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 2 cut(s) 1638, 1915
MspR9I CCNGG 4 cut(s) 1392, 1616, 1639, 1760
Mva1269I GAATGC 4 cut(s) 501, 699, 1088, 2095
MvaI CCWGG 3 cut(s) 1392, 1616, 1760
MwoI GCNNNNNNNGC 4 cut(s) 38, 1209, 1706, 2074
NciI CCSGG 1 cut(s) 1639
NdeII GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
NlaIII CATG 9 cut(s) 1035, 1555, 1586, 1668, 1738, 1842, 2282, 2360, 2436
NlaIV GGNNCC 5 cut(s) 189, 606, 804, 1143, 1913
NmeAIII GCCGAG 1 cut(s) 2031
NmuCI GTSAC 5 cut(s) 645, 843, 930, 1164, 2414
NspI RCATGY 1 cut(s) 1555
NspV TTCGAA 1 cut(s) 1987
PaqCI CACCTGC 3 cut(s) 73, 1700, 1939
PceI AGGCCT 1 cut(s) 1395
PciSI GCTCTTC 1 cut(s) 2313
PctI GAATGC 4 cut(s) 501, 699, 1088, 2095
PdmI GAANNNNTTC 1 cut(s) 1105
PfeI GAWTC 7 cut(s) 218, 410, 926, 1106, 1252, 1276, 2233
PflMI CCANNNNNTGG 1 cut(s) 260
PfoI TCCNGGA 2 cut(s) 1637, 1758
PkrI GCNGC 4 cut(s) 1429, 1708, 1947, 2311
PleI GAGTC 1 cut(s) 2251
PpsI GAGTC 1 cut(s) 2251
Ppu21I YACGTR 1 cut(s) 1415
PsiI TTATAA 4 cut(s) 26, 237, 399, 1572
Psp1406I AACGTT 1 cut(s) 468
Psp6I CCWGG 3 cut(s) 1390, 1614, 1758
PspGI CCWGG 3 cut(s) 1390, 1614, 1758
PspN4I GGNNCC 5 cut(s) 189, 606, 804, 1143, 1913
PstI CTGCAG 1 cut(s) 1950
PsuI RGATCY 3 cut(s) 1291, 1531, 2238
RsaI GTAC 4 cut(s) 150, 1269, 1606, 1662
RsaNI GTAC 4 cut(s) 149, 1268, 1605, 1661
RseI CAYNNNNRTG 1 cut(s) 378
SapI GCTCTTC 1 cut(s) 2313
SaqAI TTAA 6 cut(s) 87, 1062, 1133, 1322, 1379, 1587
SatI GCNGC 4 cut(s) 1428, 1707, 1946, 2310
Sau3AI GATC 8 cut(s) 13, 210, 1075, 1291, 1531, 1755, 2238, 2359
ScaI AGTACT 1 cut(s) 150
SchI GAGTC 1 cut(s) 2251
ScrFI CCNGG 4 cut(s) 1392, 1616, 1639, 1760
SduI GDGCHC 2 cut(s) 1219, 1802
SfaNI GCATC 8 cut(s) 156, 332, 1661, 1883, 2107, 2161, 2204, 2212
SfcI CTRYAG 4 cut(s) 34, 1095, 1946, 2175
SfuI TTCGAA 1 cut(s) 1987
SmiMI CAYNNNNRTG 1 cut(s) 378
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SnaBI TACGTA 1 cut(s) 1415
SseBI AGGCCT 1 cut(s) 1395
SsiI CCGC 1 cut(s) 1212
SspI AATATT 1 cut(s) 976
SspMI CTAG 7 cut(s) 435, 539, 737, 1151, 1220, 1479, 2114
StuI AGGCCT 1 cut(s) 1395
StyD4I CCNGG 4 cut(s) 1390, 1614, 1637, 1758
StyI CCWWGG 2 cut(s) 192, 1338
TaaI ACNGT 8 cut(s) 208, 616, 814, 1005, 1319, 1907, 2107, 2179
TaiI ACGT 5 cut(s) 471, 669, 736, 1417, 1768
TaqI TCGA 3 cut(s) 129, 1160, 1987
TatI WGTACW 2 cut(s) 148, 1604
TfiI GAWTC 7 cut(s) 218, 410, 926, 1106, 1252, 1276, 2233
Tru1I TTAA 6 cut(s) 87, 1062, 1133, 1322, 1379, 1587
Tru9I TTAA 6 cut(s) 87, 1062, 1133, 1322, 1379, 1587
TscAI CASTG 6 cut(s) 600, 798, 1758, 1998, 2112, 2419
TseFI GTSAC 5 cut(s) 645, 843, 930, 1164, 2414
TseI GCWGC 4 cut(s) 1427, 1706, 1945, 2309
Tsp45I GTSAC 5 cut(s) 645, 843, 930, 1164, 2414
TspDTI ATGAA 8 cut(s) 17, 59, 123, 876, 1134, 1723, 2088, 2166
TspGWI ACGGA 1 cut(s) 866
TspRI CASTG 6 cut(s) 600, 798, 1758, 1998, 2112, 2419
Van91I CCANNNNNTGG 1 cut(s) 260
Vha464I CTTAAG 1 cut(s) 86
XagI CCTNNNNNAGG 1 cut(s) 1509
XapI RAATTY 2 cut(s) 1435, 1862
XbaI TCTAGA 3 cut(s) 434, 538, 736
XceI RCATGY 1 cut(s) 1555
XcmI CCANNNNNNNNNTGG 2 cut(s) 343, 2405
XmnI GAANNNNTTC 1 cut(s) 1105
XspI CTAG 7 cut(s) 435, 539, 737, 1151, 1220, 1479, 2114
ZrmI AGTACT 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.