FvH4_4g14580

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
18291451 .. 18297868
6418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14580.t1

Sequence Viewer

Length: 384 bp
ATGAATCAGGCAGATGATTCCCTTAGGAACCAAGCTCCAGAAGTATTGCAATCTCTGAATGACAGATACTCTACATGGGACAATGTGCCATGCCAGATTGAAGAGGGTCTCTTCTTGGGTTCTATAGGAGCTGCAAACAACGAGGAACTCAAAAAGTTAAACGTGACACATATTTTGACAGTAGCTAATTCTTTGCCGCCTAAATATCCAAATGATTTTGTGTATAAGGTATTGAATGTTACGGACACAGAATGCACAAACCTACGACAGCATTTTGATGAATGTTTCAACTATATTGAAGAAGCGAAGGATCTGGCGGCGGTGTGTTGGTTCATTGCTTTGTGGGAAGATCAAGAAGTGTCACTATTGTTTTGTCCTATCTGA

Protein Analysis

128

Amino Acids

14.53

Weight (kDa)

4.28

Isoelectric Point (pI)

57.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 197, 317, 320
AclWI GGATC 1 cut(s) 318
AgsI TTSAA 4 cut(s) 101, 235, 289, 299
AluBI AGCT 3 cut(s) 35, 131, 185
AluI AGCT 3 cut(s) 35, 131, 185
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 1 cut(s) 318
ApeKI GCWGC 1 cut(s) 131
ArsI GACNNNNNNTTYG 2 cut(s) 157, 189
AxyI CCTNAGG 1 cut(s) 23
BbvI GCAGC 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 113
BfmI CTRYAG 1 cut(s) 123
BisI GCNGC 3 cut(s) 132, 197, 318
BlsI GCNGC 3 cut(s) 133, 198, 319
BmiI GGNNCC 1 cut(s) 29
BpmI CTGGAG 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 113
Bse21I CCTNAGG 1 cut(s) 23
Bse3DI GCAATG 1 cut(s) 333
BseMI GCAATG 1 cut(s) 333
BseXI GCAGC 1 cut(s) 118
BslFI GGGAC 1 cut(s) 92
BsmAI GTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 92
BsmI GAATGC 1 cut(s) 257
Bso31I GGTCTC 1 cut(s) 113
Bsp143I GATC 2 cut(s) 310, 349
BspACI CCGC 3 cut(s) 197, 317, 320
BspLI GGNNCC 1 cut(s) 29
BspPI GGATC 1 cut(s) 318
BspTNI GGTCTC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 333
BssMI GATC 2 cut(s) 310, 349
Bst4CI ACNGT 1 cut(s) 181
Bst6I CTCTTC 2 cut(s) 96, 116
BstDEI CTNAG 1 cut(s) 23
BstKTI GATC 2 cut(s) 313, 352
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 2 cut(s) 310, 349
BstSFI CTRYAG 1 cut(s) 123
BstV1I GCAGC 1 cut(s) 118
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
Bsu36I CCTNAGG 1 cut(s) 23
CviAII CATG 2 cut(s) 75, 90
CviJI RGCY 3 cut(s) 35, 131, 185
CviKI_1 RGCY 3 cut(s) 35, 131, 185
DdeI CTNAG 1 cut(s) 23
DpnI GATC 2 cut(s) 312, 351
DpnII GATC 2 cut(s) 310, 349
Eam1104I CTCTTC 2 cut(s) 96, 116
EarI CTCTTC 2 cut(s) 96, 116
Eco31I GGTCTC 1 cut(s) 113
Eco81I CCTNAGG 1 cut(s) 23
FaeI CATG 2 cut(s) 78, 93
FaiI YATR 6 cut(s) 76, 91, 125, 171, 225, 294
FaqI GGGAC 1 cut(s) 92
FatI CATG 2 cut(s) 74, 89
Fnu4HI GCNGC 3 cut(s) 132, 197, 318
Fsp4HI GCNGC 3 cut(s) 132, 197, 318
GluI GCNGC 3 cut(s) 132, 197, 318
GsuI CTGGAG 1 cut(s) 21
Hin1II CATG 2 cut(s) 78, 93
HinfI GANTC 2 cut(s) 4, 17
Hpy188I TCNGA 2 cut(s) 57, 383
Hpy188III TCNNGA 2 cut(s) 38, 353
HpyAV CCTTC 1 cut(s) 301
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 3 cut(s) 49, 134, 255
HpyF3I CTNAG 1 cut(s) 23
HpySE526I ACGT 1 cut(s) 162
Hsp92II CATG 2 cut(s) 78, 93
Kzo9I GATC 2 cut(s) 310, 349
LmnI GCTCC 2 cut(s) 40, 128
LpnPI CCDG 3 cut(s) 51, 107, 299
Lsp1109I GCAGC 1 cut(s) 118
MaeII ACGT 1 cut(s) 162
MaeIII GTNAC 3 cut(s) 163, 238, 360
MalI GATC 2 cut(s) 312, 351
MboI GATC 2 cut(s) 310, 349
MboII GAAGA 4 cut(s) 103, 113, 311, 359
MflI RGATCY 1 cut(s) 310
MluCI AATT 1 cut(s) 187
MnlI CCTC 2 cut(s) 97, 136
MseI TTAA 1 cut(s) 158
MslI CAYNNNNRTG 1 cut(s) 276
Mva1269I GAATGC 1 cut(s) 257
NdeII GATC 2 cut(s) 310, 349
NlaIII CATG 2 cut(s) 78, 93
NlaIV GGNNCC 1 cut(s) 29
NmuCI GTSAC 2 cut(s) 163, 360
PctI GAATGC 1 cut(s) 257
PfeI GAWTC 2 cut(s) 4, 17
PkrI GCNGC 3 cut(s) 133, 198, 319
PspN4I GGNNCC 1 cut(s) 29
PsuI RGATCY 1 cut(s) 310
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 3 cut(s) 132, 197, 318
Sau3AI GATC 2 cut(s) 310, 349
SetI ASST 6 cut(s) 37, 133, 165, 187, 231, 264
SfcI CTRYAG 1 cut(s) 123
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 1 cut(s) 187
SsiI CCGC 3 cut(s) 197, 317, 320
TaaI ACNGT 1 cut(s) 181
TaiI ACGT 1 cut(s) 165
TasI AATT 1 cut(s) 187
TauI GCSGC 2 cut(s) 199, 320
TfiI GAWTC 2 cut(s) 4, 17
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TseFI GTSAC 2 cut(s) 163, 360
TseI GCWGC 1 cut(s) 131
Tsp45I GTSAC 2 cut(s) 163, 360
TspDTI ATGAA 3 cut(s) 17, 294, 322
TspGWI ACGGA 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.