Rmu_co8157318.1_g000001

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8157318.1
Physical Location & Seq
Forward (+)
254 .. 609
356 bp
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UTR
Exon/CDS
Intron
Rmu_co8157318.1_g000001.1.cds

Sequence Viewer

Length: 261 bp
atgaatcaggtagatgattcccttaggaagcaagctgcagaagtattgcaatctatgaatgacagattctctacatgggacaatgttccatgccagattgaagagggtctcttcttgggttctattggagctgcaaacaacaaggacgaactgaaaaagttaaacgtgacgcacattctgacagtagctaattctttgccacctaagtatccgaatgattttgtgtataaggtattgaatggtaagagtcttcttccttga

Protein Analysis

86

Amino Acids

9.6

Weight (kDa)

5.67

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 101, 238
AluBI AGCT 3 cut(s) 35, 131, 188
AluI AGCT 3 cut(s) 35, 131, 188
Alw26I GTCTC 1 cut(s) 113
ApeKI GCWGC 2 cut(s) 35, 131
AxyI CCTNAGG 1 cut(s) 23
BaeI ACNNNNGTAYC 2 cut(s) 191, 224
BbsI GAAGAC 1 cut(s) 242
BbvI GCAGC 2 cut(s) 22, 118
BciVI GTATCC 1 cut(s) 219
BcoDI GTCTC 1 cut(s) 113
BfmI CTRYAG 1 cut(s) 36
BfuI GTATCC 1 cut(s) 219
BisI GCNGC 2 cut(s) 36, 132
BlsI GCNGC 2 cut(s) 37, 133
BpiI GAAGAC 1 cut(s) 242
BsaI GGTCTC 1 cut(s) 113
Bse21I CCTNAGG 1 cut(s) 23
BseXI GCAGC 2 cut(s) 22, 118
BslFI GGGAC 1 cut(s) 92
BsmAI GTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 92
Bso31I GGTCTC 1 cut(s) 113
BspMAI CTGCAG 1 cut(s) 40
BspTNI GGTCTC 1 cut(s) 113
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 2 cut(s) 96, 116
BstC8I GCNNGC 1 cut(s) 33
BstDEI CTNAG 2 cut(s) 23, 204
BstMAI GTCTC 1 cut(s) 113
BstSFI CTRYAG 1 cut(s) 36
BstV1I GCAGC 2 cut(s) 22, 118
BstV2I GAAGAC 1 cut(s) 242
Bsu36I CCTNAGG 1 cut(s) 23
BsuI GTATCC 1 cut(s) 219
Cac8I GCNNGC 1 cut(s) 33
CseI GACGC 1 cut(s) 178
CviAII CATG 2 cut(s) 75, 90
CviJI RGCY 3 cut(s) 35, 131, 188
CviKI_1 RGCY 3 cut(s) 35, 131, 188
DdeI CTNAG 2 cut(s) 23, 204
Eam1104I CTCTTC 2 cut(s) 96, 116
EarI CTCTTC 2 cut(s) 96, 116
Eco31I GGTCTC 1 cut(s) 113
Eco81I CCTNAGG 1 cut(s) 23
FaeI CATG 2 cut(s) 78, 93
FaiI YATR 4 cut(s) 56, 76, 91, 228
FaqI GGGAC 1 cut(s) 92
FatI CATG 2 cut(s) 74, 89
Fnu4HI GCNGC 2 cut(s) 36, 132
Fsp4HI GCNGC 2 cut(s) 36, 132
GluI GCNGC 2 cut(s) 36, 132
HgaI GACGC 1 cut(s) 178
Hin1II CATG 2 cut(s) 78, 93
HinfI GANTC 4 cut(s) 4, 17, 66, 247
Hpy188I TCNGA 2 cut(s) 180, 213
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 3 cut(s) 38, 49, 134
HpyF3I CTNAG 2 cut(s) 23, 204
HpySE526I ACGT 1 cut(s) 165
Hsp92II CATG 2 cut(s) 78, 93
LmnI GCTCC 1 cut(s) 128
LpnPI CCDG 1 cut(s) 107
Lsp1109I GCAGC 2 cut(s) 22, 118
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 1 cut(s) 166
MboII GAAGA 4 cut(s) 103, 113, 242, 245
MluCI AATT 1 cut(s) 190
MlyI GAGTC 1 cut(s) 256
MnlI CCTC 1 cut(s) 97
MseI TTAA 1 cut(s) 161
NlaIII CATG 2 cut(s) 78, 93
NmuCI GTSAC 1 cut(s) 166
PfeI GAWTC 3 cut(s) 4, 17, 66
PkrI GCNGC 2 cut(s) 37, 133
PleI GAGTC 1 cut(s) 255
PpsI GAGTC 1 cut(s) 255
PstI CTGCAG 1 cut(s) 40
SaqAI TTAA 1 cut(s) 161
SatI GCNGC 2 cut(s) 36, 132
SchI GAGTC 1 cut(s) 256
SetI ASST 7 cut(s) 12, 37, 133, 168, 190, 205, 234
SfcI CTRYAG 1 cut(s) 36
SgeI CNNG 8 cut(s) 20, 44, 87, 102, 106, 127, 154, 178
Sse9I AATT 1 cut(s) 190
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 168
TasI AATT 1 cut(s) 190
TfiI GAWTC 3 cut(s) 4, 17, 66
Tru1I TTAA 1 cut(s) 161
Tru9I TTAA 1 cut(s) 161
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 2 cut(s) 35, 131
Tsp45I GTSAC 1 cut(s) 166
TspDTI ATGAA 2 cut(s) 17, 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.