Rorug04G0151300

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
26486314 .. 26486727
414 bp
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UTR
Exon/CDS
Intron
Rorug04G0151300.1

Sequence Viewer

Length: 414 bp
ATGATGAAATTGGCATTGGAAGCTCCACATGACTCGGCAAGCGAATTGGTTAGAGCCGCTTCTAAGGTAATTTCAGAATGGAAACACCTGCTCAAGTATTACATATCAGACAGAGATGAGGACATAGAAGTAATAATCAAGTTTGAAGAAATGTGTTTGGAGTCTGCCAAGGAATTCTCCTCTGTGTTCGATAAGATACTGTATCAACTGTATGACCAAGAAGTTATCCAAGAAGAAGCTATTCTGAGGTGGGTTGAAGAAAAGACAGATGCGGATGAATCAGACAGAATTTTCGTCATGCAGGCGGAAACGTTCGTCCAATGGTTGAGAGAGGCAGAAGAGAGGATGATGAAGGGTAGGAAGAAGGGAGATTTATATAGCTCCAATTCGGTGGTGGGATGCTTTATTGATTGA

Protein Analysis

137

Amino Acids

16.11

Weight (kDa)

4.64

Isoelectric Point (pI)

44.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
W2 PF02020 42 - 114 1.5e-16 eIF4-gamma/eIF5/eIF2-epsilon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 96
Acc36I ACCTGC 1 cut(s) 96
AciI CCGC 3 cut(s) 57, 272, 305
AclI AACGTT 1 cut(s) 311
AcsI RAATTY 2 cut(s) 173, 288
AgsI TTSAA 2 cut(s) 146, 257
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AluBI AGCT 3 cut(s) 23, 239, 381
AluI AGCT 3 cut(s) 23, 239, 381
ApoI RAATTY 2 cut(s) 173, 288
ArsI GACNNNNNNTTYG 2 cut(s) 275, 307
Asp700I GAANNNNTTC 1 cut(s) 240
BfuAI ACCTGC 1 cut(s) 96
BisI GCNGC 1 cut(s) 57
BlsI GCNGC 1 cut(s) 58
BmsI GCATC 2 cut(s) 259, 389
BpuEI CTTGAG 1 cut(s) 77
BsaJI CCNNGG 1 cut(s) 168
BseDI CCNNGG 1 cut(s) 168
BseGI GGATG 3 cut(s) 280, 351, 404
BseMII CTCAG 1 cut(s) 236
BseRI GAGGAG 1 cut(s) 169
BspACI CCGC 3 cut(s) 57, 272, 305
BspCNI CTCAG 1 cut(s) 237
BspMI ACCTGC 1 cut(s) 96
BssECI CCNNGG 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 168
Bst4CI ACNGT 2 cut(s) 201, 210
Bst6I CTCTTC 1 cut(s) 333
BstC8I GCNNGC 2 cut(s) 40, 303
BstDEI CTNAG 2 cut(s) 63, 245
BstF5I GGATG 3 cut(s) 280, 351, 404
BstMWI GCNNNNNNNGC 1 cut(s) 20
BstXI CCANNNNNNTGG 1 cut(s) 391
BtsCI GGATG 3 cut(s) 280, 351, 404
BveI ACCTGC 1 cut(s) 96
Cac8I GCNNGC 2 cut(s) 40, 303
CviAII CATG 2 cut(s) 29, 298
CviJI RGCY 4 cut(s) 23, 56, 239, 381
CviKI_1 RGCY 4 cut(s) 23, 56, 239, 381
DdeI CTNAG 2 cut(s) 63, 245
Eam1104I CTCTTC 1 cut(s) 333
EarI CTCTTC 1 cut(s) 333
EciI GGCGGA 1 cut(s) 320
Eco130I CCWWGG 1 cut(s) 168
EcoRI GAATTC 1 cut(s) 173
EcoT14I CCWWGG 1 cut(s) 168
ErhI CCWWGG 1 cut(s) 168
FaeI CATG 2 cut(s) 32, 301
FaiI YATR 7 cut(s) 30, 104, 125, 213, 299, 376, 378
FatI CATG 2 cut(s) 28, 297
Fnu4HI GCNGC 1 cut(s) 57
FokI GGATG 2 cut(s) 287, 358
Fsp4HI GCNGC 1 cut(s) 57
GluI GCNGC 1 cut(s) 57
Hin1II CATG 2 cut(s) 32, 301
HinfI GANTC 3 cut(s) 32, 161, 278
Hpy188I TCNGA 4 cut(s) 76, 109, 246, 283
HpyAV CCTTC 2 cut(s) 346, 358
HpyCH4III ACNGT 2 cut(s) 201, 210
HpyCH4IV ACGT 1 cut(s) 311
HpyCH4V TGCA 1 cut(s) 301
HpyF10VI GCNNNNNNNGC 1 cut(s) 20
HpyF3I CTNAG 2 cut(s) 63, 245
HpySE526I ACGT 1 cut(s) 311
Hsp92II CATG 2 cut(s) 32, 301
LmnI GCTCC 2 cut(s) 28, 386
LpnPI CCDG 2 cut(s) 101, 287
LweI GCATC 2 cut(s) 259, 389
MaeII ACGT 1 cut(s) 311
MboII GAAGA 5 cut(s) 158, 245, 269, 350, 373
MluCI AATT 6 cut(s) 8, 44, 69, 173, 288, 385
MlyI GAGTC 2 cut(s) 26, 170
MnlI CCTC 5 cut(s) 112, 190, 240, 325, 336
MroXI GAANNNNTTC 1 cut(s) 240
MwoI GCNNNNNNNGC 1 cut(s) 20
NlaIII CATG 2 cut(s) 32, 301
NmeAIII GCCGAG 1 cut(s) 14
PaqCI CACCTGC 1 cut(s) 96
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 1 cut(s) 278
PkrI GCNGC 1 cut(s) 58
PleI GAGTC 2 cut(s) 26, 169
PpsI GAGTC 2 cut(s) 26, 169
Psp1406I AACGTT 1 cut(s) 311
SatI GCNGC 1 cut(s) 57
SchI GAGTC 2 cut(s) 26, 170
SetI ASST 7 cut(s) 25, 69, 90, 241, 251, 314, 383
SfaNI GCATC 2 cut(s) 259, 389
SmlI CTYRAG 1 cut(s) 92
SmoI CTYRAG 1 cut(s) 92
Sse9I AATT 6 cut(s) 8, 44, 69, 173, 288, 385
SsiI CCGC 3 cut(s) 57, 272, 305
StyI CCWWGG 1 cut(s) 168
TaaI ACNGT 2 cut(s) 201, 210
TaiI ACGT 1 cut(s) 314
TaqI TCGA 1 cut(s) 189
TasI AATT 6 cut(s) 8, 44, 69, 173, 288, 385
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 1 cut(s) 278
TspDTI ATGAA 3 cut(s) 20, 291, 365
XapI RAATTY 2 cut(s) 173, 288
XcmI CCANNNNNNNNNTGG 1 cut(s) 391
XmnI GAANNNNTTC 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.