Rh4BG064600

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
11494873 .. 11495964
1092 bp
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UTR
Exon/CDS
Intron
Rh4BG064600.1

Sequence Viewer

Length: 552 bp
ATGGGGCATCTGAGGGGAACTGATTCACTTGTGAACCAAGCCGCACCAGCATTGCAATCTATGAATGAGAGACTTTGTAGGGAGGACAATATTCCTTGCCAAATTGAAGAGGGCCTCTTCTTAGGTTCTCTTGGAGCTGCAAATAACAAGGAGACGCTGGAGAACTTAAATGTCACGCACATTTTGACCGTGGCCGATTCTTTGCCACCTAAATATCCAAACGATTTCGTGTACAGGGTTTTGAATGTCGAAGACAGAAGAACCACAGACCTGCAACAATACTTTGATGAGTGTTTCAATTATATCGAAGAAGCTAAAACATCTGGGGGTGGTGTGTTGGTTCATTGCTTTTCAGGAAAATCGAGAAGTGCGACTATTGTATTATCTTATCTGATGAAGAAGCATCGTATGAGTCTATCTCAAGCTCTTGAACATGTGAAGGAAAAAAGACCAGAGGCAGCTCCTAATGCTGGTTTTATTAAACAACTGAAGAACCTTGAAGTAGTGTTGGGCATATCCGCGATTGAACTGCCAAAACCGACAAACCCATAG

Protein Analysis

183

Amino Acids

20.34

Weight (kDa)

6.21

Isoelectric Point (pI)

56.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 39 - 167 1.2e-31 Dual specificity phosphatase, catalytic domain
PTP-SAK PF22784 48 - 134 2.8e-06 Swiss Army Knife protein, DSP-PTPase phosphatase domain
Tc-R-P PF22785 51 - 133 2.4e-06 Polymorphic toxin system, DSP-PTPase phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 279
AccII CGCG 1 cut(s) 521
AciI CCGC 2 cut(s) 42, 519
AcoI YGGCCR 1 cut(s) 192
AcuI CTGAAG 1 cut(s) 509
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 1 cut(s) 470
AflIII ACRYGT 1 cut(s) 433
AgsI TTSAA 6 cut(s) 107, 244, 298, 431, 500, 527
AluBI AGCT 4 cut(s) 137, 314, 425, 461
AluI AGCT 4 cut(s) 137, 314, 425, 461
Alw26I GTCTC 2 cut(s) 64, 146
AoxI GGCC 2 cut(s) 112, 192
ApeKI GCWGC 2 cut(s) 137, 458
Asp700I GAANNNNTTC 1 cut(s) 22
AspS9I GGNCC 1 cut(s) 112
BbsI GAAGAC 1 cut(s) 258
BbvI GCAGC 2 cut(s) 124, 470
BcgI CGANNNNNNTGC 2 cut(s) 511, 545
BcoDI GTCTC 2 cut(s) 64, 146
BfuAI ACCTGC 1 cut(s) 279
BisI GCNGC 3 cut(s) 42, 138, 459
BlsI GCNGC 3 cut(s) 43, 139, 460
BmgT120I GGNCC 1 cut(s) 112
BmsI GCATC 2 cut(s) 16, 412
BpiI GAAGAC 1 cut(s) 258
BplI GAGNNNNNCTC 2 cut(s) 403, 435
BpmI CTGGAG 1 cut(s) 179
BpuEI CTTGAG 1 cut(s) 405
BsaJI CCNNGG 1 cut(s) 189
Bsc4I CCNNNNNNNGG 1 cut(s) 470
Bse3DI GCAATG 2 cut(s) 50, 343
BseDI CCNNGG 1 cut(s) 189
BseLI CCNNNNNNNGG 1 cut(s) 470
BseMI GCAATG 2 cut(s) 50, 343
BseXI GCAGC 2 cut(s) 124, 470
Bsh1236I CGCG 1 cut(s) 521
BshFI GGCC 2 cut(s) 114, 194
BslI CCNNNNNNNGG 1 cut(s) 470
BsmAI GTCTC 2 cut(s) 64, 146
BsmBI CGTCTC 1 cut(s) 146
BsnI GGCC 2 cut(s) 114, 194
Bsp1407I TGTACA 1 cut(s) 231
BspACI CCGC 2 cut(s) 42, 519
BspANI GGCC 2 cut(s) 114, 194
BspFNI CGCG 1 cut(s) 521
BspMI ACCTGC 1 cut(s) 279
BsrDI GCAATG 2 cut(s) 50, 343
BsrGI TGTACA 1 cut(s) 231
BssECI CCNNGG 1 cut(s) 189
Bst4CI ACNGT 1 cut(s) 190
Bst6I CTCTTC 2 cut(s) 102, 122
BstAUI TGTACA 1 cut(s) 231
BstDEI CTNAG 2 cut(s) 11, 121
BstDSI CCRYGG 1 cut(s) 189
BstFNI CGCG 1 cut(s) 521
BstMAI GTCTC 2 cut(s) 64, 146
BstMWI GCNNNNNNNGC 2 cut(s) 47, 467
BstNSI RCATGY 1 cut(s) 437
BstUI CGCG 1 cut(s) 521
BstV1I GCAGC 2 cut(s) 124, 470
BstV2I GAAGAC 1 cut(s) 258
BsuRI GGCC 2 cut(s) 114, 194
BtgI CCRYGG 1 cut(s) 189
BveI ACCTGC 1 cut(s) 279
Cfr13I GGNCC 1 cut(s) 112
CseI GACGC 1 cut(s) 163
Csp6I GTAC 1 cut(s) 232
CviAII CATG 1 cut(s) 434
CviJI RGCY 7 cut(s) 41, 114, 137, 194, 314, 425, 461
CviKI_1 RGCY 7 cut(s) 41, 114, 137, 194, 314, 425, 461
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 2 cut(s) 11, 121
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 2 cut(s) 102, 122
EarI CTCTTC 2 cut(s) 102, 122
Eco57I CTGAAG 1 cut(s) 509
EcoO109I RGGNCCY 1 cut(s) 112
Esp3I CGTCTC 1 cut(s) 146
FaeI CATG 1 cut(s) 437
FaiI YATR 6 cut(s) 62, 303, 410, 435, 515, 550
FatI CATG 1 cut(s) 433
Fnu4HI GCNGC 3 cut(s) 42, 138, 459
Fsp4HI GCNGC 3 cut(s) 42, 138, 459
GluI GCNGC 3 cut(s) 42, 138, 459
GsuI CTGGAG 1 cut(s) 179
HaeIII GGCC 2 cut(s) 114, 194
HgaI GACGC 1 cut(s) 163
Hin1II CATG 1 cut(s) 437
HinfI GANTC 3 cut(s) 23, 197, 412
Hpy166II GTNNAC 2 cut(s) 34, 232
Hpy188I TCNGA 2 cut(s) 12, 393
Hpy188III TCNNGA 3 cut(s) 354, 363, 428
Hpy8I GTNNAC 2 cut(s) 34, 232
HpyAV CCTTC 1 cut(s) 433
HpyCH4III ACNGT 1 cut(s) 190
HpyCH4V TGCA 3 cut(s) 55, 140, 274
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 467
HpyF3I CTNAG 2 cut(s) 11, 121
Hsp92II CATG 1 cut(s) 437
LmnI GCTCC 2 cut(s) 134, 466
LpnPI CCDG 8 cut(s) 60, 143, 220, 284, 309, 339, 456, 465
Lsp1109I GCAGC 2 cut(s) 124, 470
LweI GCATC 2 cut(s) 16, 412
MaeIII GTNAC 1 cut(s) 172
MboII GAAGA 7 cut(s) 109, 119, 263, 270, 320, 409, 502
MluCI AATT 2 cut(s) 102, 298
MlyI GAGTC 1 cut(s) 421
MnlI CCTC 5 cut(s) 6, 76, 103, 125, 448
MroXI GAANNNNTTC 1 cut(s) 22
MseI TTAA 2 cut(s) 167, 480
MvnI CGCG 1 cut(s) 521
MwoI GCNNNNNNNGC 2 cut(s) 47, 467
NlaIII CATG 1 cut(s) 437
NmuCI GTSAC 1 cut(s) 172
NspI RCATGY 1 cut(s) 437
PciI ACATGT 1 cut(s) 433
PcsI WCGNNNNNNNCGW 1 cut(s) 368
PdmI GAANNNNTTC 1 cut(s) 22
PfeI GAWTC 2 cut(s) 23, 197
PkrI GCNGC 3 cut(s) 43, 139, 460
PleI GAGTC 1 cut(s) 420
PpsI GAGTC 1 cut(s) 420
PscI ACATGT 1 cut(s) 433
PspPI GGNCC 1 cut(s) 112
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
SaqAI TTAA 2 cut(s) 167, 480
SatI GCNGC 3 cut(s) 42, 138, 459
Sau96I GGNCC 1 cut(s) 112
SchI GAGTC 1 cut(s) 421
SetI ASST 8 cut(s) 127, 139, 211, 273, 316, 427, 463, 498
SfaNI GCATC 2 cut(s) 16, 412
SmlI CTYRAG 1 cut(s) 420
SmoI CTYRAG 1 cut(s) 420
Sse9I AATT 2 cut(s) 102, 298
SsiI CCGC 2 cut(s) 42, 519
SspI AATATT 1 cut(s) 91
TaaI ACNGT 1 cut(s) 190
TaqI TCGA 3 cut(s) 249, 306, 362
TasI AATT 2 cut(s) 102, 298
TatI WGTACW 1 cut(s) 231
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 2 cut(s) 23, 197
Tru1I TTAA 2 cut(s) 167, 480
Tru9I TTAA 2 cut(s) 167, 480
TseFI GTSAC 1 cut(s) 172
TseI GCWGC 2 cut(s) 137, 458
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 3 cut(s) 77, 332, 410
XceI RCATGY 1 cut(s) 437
XmnI GAANNNNTTC 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.