Rh4AG213100

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
50696471 .. 50699967
3497 bp
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UTR
Exon/CDS
Intron
Rh4AG213100.1

Sequence Viewer

Length: 498 bp
ATGAATGACAGATTCTCTACATGGGACAATGTTCCATGCCAGATTGAAGAGGGTCTCTTCTTGGGTTCTATTGGAGCTGCAAACAACAAGGACGAACTCAAAAAGTTAAACGTGACGCACATTCTGACAGTAGCTAATTCTTTGCCACCTAAGTATCCGAATGATTTTGTGTATAAGGTATTGAATGTTACGGACACAGAATGCACAAACCTACGACAGCACTTCGATGAATGTTACAACTATATTGAAGAAGCTAAAGGATCTGGAGGCGGTGTGTTGGTTCATTGCTTTGTGGGAAGATCAAGAAGTGTGACTATTGTTTTGTCTTATCTAATGAAAAAGCATGGCATCAGCCTTTCTCATGCTCTTGAACAAGTGAGGAGCAAACGACCACAGGCAGCTCCAAATGTTGGTTTCATTTCACAGTTGCAGGACTTTGAAAAGTCTCTTCAGGGTTCACTTTATAGTAGGTGCTTAAATTACATTATGAAAATGTAA

Protein Analysis

165

Amino Acids

18.59

Weight (kDa)

8.25

Isoelectric Point (pI)

54.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 19 - 148 7.4e-32 Dual specificity phosphatase, catalytic domain
PTP-SAK PF22784 28 - 125 6.4e-06 Swiss Army Knife protein, DSP-PTPase phosphatase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 410
AciI CCGC 1 cut(s) 270
AclWI GGATC 1 cut(s) 268
AcuI CTGAAG 1 cut(s) 434
AfiI CCNNNNNNNGG 1 cut(s) 410
AgsI TTSAA 5 cut(s) 47, 184, 248, 371, 440
AluBI AGCT 4 cut(s) 77, 134, 254, 401
AluI AGCT 4 cut(s) 77, 134, 254, 401
Alw26I GTCTC 2 cut(s) 59, 450
AlwI GGATC 1 cut(s) 268
ApeKI GCWGC 2 cut(s) 77, 398
ArsI GACNNNNNNTTYG 2 cut(s) 304, 336
BaeI ACNNNNGTAYC 2 cut(s) 137, 170
BbvI GCAGC 2 cut(s) 64, 410
BciVI GTATCC 1 cut(s) 165
BcoDI GTCTC 2 cut(s) 59, 450
BfuI GTATCC 1 cut(s) 165
BisI GCNGC 2 cut(s) 78, 399
BlsI GCNGC 2 cut(s) 79, 400
BmsI GCATC 1 cut(s) 357
BpmI CTGGAG 1 cut(s) 285
BsaI GGTCTC 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 258, 288
Bsc4I CCNNNNNNNGG 1 cut(s) 410
Bse3DI GCAATG 1 cut(s) 283
BseLI CCNNNNNNNGG 1 cut(s) 410
BseMI GCAATG 1 cut(s) 283
BseRI GAGGAG 1 cut(s) 394
BseXI GCAGC 2 cut(s) 64, 410
BslFI GGGAC 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 410
BsmAI GTCTC 2 cut(s) 59, 450
BsmFI GGGAC 1 cut(s) 38
BsmI GAATGC 1 cut(s) 206
Bso31I GGTCTC 1 cut(s) 59
Bsp143I GATC 2 cut(s) 260, 299
BspACI CCGC 1 cut(s) 270
BspPI GGATC 1 cut(s) 268
BspTNI GGTCTC 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 283
BssMI GATC 2 cut(s) 260, 299
Bst4CI ACNGT 2 cut(s) 130, 426
Bst6I CTCTTC 3 cut(s) 42, 62, 453
BstDEI CTNAG 1 cut(s) 150
BstKTI GATC 2 cut(s) 263, 302
BstMAI GTCTC 2 cut(s) 59, 450
BstMBI GATC 2 cut(s) 260, 299
BstV1I GCAGC 2 cut(s) 64, 410
BstX2I RGATCY 1 cut(s) 260
BstYI RGATCY 1 cut(s) 260
BsuI GTATCC 1 cut(s) 165
CseI GACGC 1 cut(s) 124
CviAII CATG 4 cut(s) 21, 36, 344, 362
CviJI RGCY 5 cut(s) 77, 134, 254, 354, 401
CviKI_1 RGCY 5 cut(s) 77, 134, 254, 354, 401
DdeI CTNAG 1 cut(s) 150
DpnI GATC 2 cut(s) 262, 301
DpnII GATC 2 cut(s) 260, 299
Eam1104I CTCTTC 3 cut(s) 42, 62, 453
EarI CTCTTC 3 cut(s) 42, 62, 453
Eco31I GGTCTC 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 434
FaeI CATG 4 cut(s) 24, 39, 347, 365
FaiI YATR 8 cut(s) 22, 37, 174, 243, 345, 363, 465, 488
FaqI GGGAC 1 cut(s) 38
FatI CATG 4 cut(s) 20, 35, 343, 361
Fnu4HI GCNGC 2 cut(s) 78, 399
Fsp4HI GCNGC 2 cut(s) 78, 399
GluI GCNGC 2 cut(s) 78, 399
GsuI CTGGAG 1 cut(s) 285
HgaI GACGC 1 cut(s) 124
Hin1II CATG 4 cut(s) 24, 39, 347, 365
HinfI GANTC 1 cut(s) 12
Hpy166II GTNNAC 1 cut(s) 458
Hpy188I TCNGA 2 cut(s) 126, 159
Hpy188III TCNNGA 3 cut(s) 264, 303, 368
Hpy8I GTNNAC 1 cut(s) 458
HpyCH4III ACNGT 2 cut(s) 130, 426
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 3 cut(s) 80, 204, 430
HpyF3I CTNAG 1 cut(s) 150
HpySE526I ACGT 1 cut(s) 111
Hsp92II CATG 4 cut(s) 24, 39, 347, 365
Kzo9I GATC 2 cut(s) 260, 299
LmnI GCTCC 3 cut(s) 74, 381, 406
LpnPI CCDG 5 cut(s) 53, 249, 380, 416, 437
Lsp1109I GCAGC 2 cut(s) 64, 410
LweI GCATC 1 cut(s) 357
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 4 cut(s) 112, 187, 233, 310
MalI GATC 2 cut(s) 262, 301
MboI GATC 2 cut(s) 260, 299
MboII GAAGA 5 cut(s) 49, 59, 260, 309, 440
MflI RGATCY 1 cut(s) 260
MluCI AATT 2 cut(s) 136, 478
MnlI CCTC 3 cut(s) 43, 260, 372
MseI TTAA 2 cut(s) 107, 476
MslI CAYNNNNRTG 1 cut(s) 225
Mva1269I GAATGC 1 cut(s) 206
NdeII GATC 2 cut(s) 260, 299
NlaIII CATG 4 cut(s) 24, 39, 347, 365
NmuCI GTSAC 2 cut(s) 112, 310
PctI GAATGC 1 cut(s) 206
PfeI GAWTC 1 cut(s) 12
PflMI CCANNNNNTGG 1 cut(s) 410
PkrI GCNGC 2 cut(s) 79, 400
PsuI RGATCY 1 cut(s) 260
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 2 cut(s) 107, 476
SatI GCNGC 2 cut(s) 78, 399
Sau3AI GATC 2 cut(s) 260, 299
SetI ASST 9 cut(s) 79, 114, 136, 151, 180, 213, 256, 403, 473
SfaNI GCATC 1 cut(s) 357
SmiMI CAYNNNNRTG 1 cut(s) 225
Sse9I AATT 2 cut(s) 136, 478
SsiI CCGC 1 cut(s) 270
TaaI ACNGT 2 cut(s) 130, 426
TaiI ACGT 1 cut(s) 114
TaqI TCGA 1 cut(s) 225
TasI AATT 2 cut(s) 136, 478
TfiI GAWTC 1 cut(s) 12
Tru1I TTAA 2 cut(s) 107, 476
Tru9I TTAA 2 cut(s) 107, 476
TseFI GTSAC 2 cut(s) 112, 310
TseI GCWGC 2 cut(s) 77, 398
Tsp45I GTSAC 2 cut(s) 112, 310
TspDTI ATGAA 5 cut(s) 17, 243, 272, 350, 406
TspGWI ACGGA 1 cut(s) 206
Van91I CCANNNNNTGG 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.