FvH4_5g22710

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
14042443 .. 14045696
3254 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g22710.t1

Sequence Viewer

Length: 2826 bp
ATGGTGGAGAGTGCAGTAAAGTTTCTGCTTGACAAGCTTGGACCTCTTATCGAAAATGAGTGGCAACTGTTGAGAGGGGTTAGGGAAGAAATTTTGTATCTAAGAGGAGAACTGGAGTGCATGACGGCTTTCCTGAGGGTTGCTGATGCGTATGAAGAGAGTGATGAGGAACTCAAAGTCTGGGTTAAACAACTAAGAGAAATTGCCCATGAAAGTGAAGATGTTCTTGATGAGTTTACCCTTCTACAAGCACATGATCATGGGGTGGAGGGATTATATGGTTCAATCCATAAGCTTTCTTGCTGCATCAAGAACACAAAAGCTCGATACCGAATTGCTTCAGAGTTAAGAGCCATAAACTCCAGGATCAGAAAAGTCTCTGAGGTTCATAAGCGACTCCACCACAAATTCAATATGGCTGAACAAGGCTCAAGTTCTAAGGACCATCGAGGTGACGCTTTACTTCTAGAGAAAACTGATATAGTCGGCATAGACAAGCCTATTAAGCAGATGGTCGGGAGGCTGCTCAATGGTGATTGTGCACGTGAGGTAGTTTCTGTGGCAGGAATGGGAGGAATGGGGAAGACTACCCTGGCGAAGCAAGTCTATGATGCAGCAGAAGTGAAGAAACATTTCAAATTACGCGCTTGGATCACTGTTACTCAGTCTTTCAAACTAGGGGAACTTCTTAAAGACATCGTTCAACAGCTCCACCAAGCAATCAGAAGTCCAGTTCCACAAGAAATCAATAGCATGAGTACCAACCAGCTGAAAACAATCATTAAAGACTTCCTACAGAAGAGGAGGTATCTCATTGTCTTGGATGATGTGTGGCACTTGTACGGATGGAATGCTATGAAGTATGCATTGCCTAATAATATGTATGGCAGCCGAGTAATTCTCACTACTCGAAATGCAGATATAGCCTCGACAACAAGCATGGAGTCTGGAGGTGAAGTCTACACTTTGGAGCCCTTGCCCCCAATGGAATCATGGGAGTTACTGTGCAAGAAGACATTCCAAGGGAATTCCTGCCCTCCTCATTTAGAGAAAATCTGTAATTATGTTTTGAAAAAGTGTGAGGGGCTTCCCCTTGCTATTGTGGCTATTAGTGGAGTTTTAGCTGCCAAAGATAAGCGCAGAATTGATGAGTGGGATATGGTTGGCCACAGTCTTGGGTATGAAATTGAGGGCAACGACAAACTGCAGGACTTGAAGAAAGTACTTTCACTCAGCTTTAATGATTTACCATACTATCTCAAATCTTGCTTCTTGTACCTGAGCATCTTTCCAGAGGATCATTTGATTAAGCATATGAGGCTTATTCGATTATGGATGGCAGAGGGCTTCATTGAAGAAAAACAAGGAAAAACATTGGAAGAGGTTGCAGAGGATTACCTCAATGAACTGTTGAATAGGAGCATGATTCAAGCAGCAGAGACAACAGCTGATGGAAGGGTTACAAAACTTCGTATCCATGATCTCTTCCGTGAAATAATCACCTCCAAAACAAGAGATCAGAACTTTGCCACAGTAGCCAAAGAGCATAATGTAACACTGCCAGAAAAAATCCGCCGCCTGTCAATACATAACACACTGCAGTATGTACAGACAAACAGGTGTGCTTCTCAACTACGTTCTCTTTTTATGTTCACAGTAGCTGAGAAACCATCACTACGAAGACTCTTCCCGGCCGGCTTTGCGCTGCTTAATGTGTTGGATTTGCAAAGCACTCCTTTAAATGTTTTCCCAGTTGAAGTTGTGAACCTTTACTTTTTAAAGTATCTGAGTTTGAGAGATACCAGGGTAAAAGCCATCCCTAGATTTATAGGGAAGCTTCAGAACCTGGAAACTTTGGATATGAAGCATTCTCGTGTTACTGAACTTCCAGTTGAAATCCTGAAACTCCAACGTCTGCGCTATCTCCTGGTGTATCGTTATGAGTTTGTTCCTTACGAAGATTTTCACTCTACATATGGTTTTAAGGTCCTTGAAAAAATAGGGGCTTTGAAATCCCTTCAAAAGCTATGTTTCATTGAGGTCAACCAAGGTGGCAGTGCATTAATGAGAGAGCTGGGGAAACTAATTCAATTGAGAAGGTTAGGCATTGTTAAGATGAGGAAAGAAGATGGCAAGGCTCTTTCTTCATCCATTGAAAAGTTGTCCAAACTTTCTGCATTGTCCATAACTTCAGTGGAAGAGGACGAGATCATTGATTTGGAGCACCTATATTCTCCTCCCATGTTGCTTCAGCGTTTGTACTTGCGAGGGAGATTGGAAGCATTGCCTCATTGGATACCTTCTCTTCACAGCCTCGTCAAGTTGTATTTGAAATGGAGCAGGTTAAAGGATGATCCACTTGTATCTCTTCAACATTTGCCCAATCTAGTACATCTCGAGCTGTGTCAGGTTTTTGAAGGAGACACATTATGTTTTGGAGATGGCGGTTTTAAGAAGCTCAAGCATTTATGCCTCGATAAATCTGATGAACTTCGATGTATAGAGGTGGAGGTGGGAACAATGCCTTGTCTTGAAAATCTAAGCATCCGGCGCTGTAAATCACTGGAGAAAGTACCATCAGGCATTGAACATCTCGTCAAACTAAAGGTGCTCAAGTTTTTCGATATGCCAGAAAAACTAATCAAGACTCTACTTCCACATGAAAAGGGCAATGATTATTGGAAAGTTTGTCATGTTCCAGAAGTTTATGTCACTTACTTGAGAGAGTTTGGGTGGGAGGTATTCTCACTAGAAGGCTTGAGCGAGGCACAACACTCTTCTCAACCCAGTTCTGTCATGAAGAGCCTTGGAACCGGTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

942

Amino Acids

108.12

Weight (kDa)

8.59

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 4e-24 Rx N-terminal domain
NB-ARC PF00931 165 - 344 3.1e-42 NB-ARC domain
AAA_16 PF13191 170 - 277 3.7e-06 AAA ATPase domain
WHD_DRP PF23559 429 - 500 6.9e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 544 - 872 6.8e-47 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2331
AccI GTMKAC 1 cut(s) 960
AccII CGCG 1 cut(s) 645
AciI CCGC 3 cut(s) 1573, 1576, 2445
AclWI GGATC 4 cut(s) 374, 659, 1305, 2348
AcoI YGGCCR 2 cut(s) 1165, 1692
AcsI RAATTY 3 cut(s) 90, 407, 1027
AcuI CTGAAG 4 cut(s) 324, 1823, 2175, 2234
AcvI CACGTG 1 cut(s) 545
AfaI GTAC 8 cut(s) 760, 842, 1224, 1277, 1608, 2261, 2391, 2574
AgeI ACCGGT 1 cut(s) 2813
AjnI CCWGG 5 cut(s) 362, 591, 1802, 1845, 1926
Alw21I GWGCWC 3 cut(s) 544, 2226, 2613
Alw26I GTCTC 3 cut(s) 382, 1433, 2415
Alw44I GTGCAC 1 cut(s) 540
AlwI GGATC 4 cut(s) 374, 659, 1305, 2348
AlwNI CAGNNNCTG 2 cut(s) 1661, 1846
Ama87I CYCGRG 1 cut(s) 2396
AoxI GGCC 2 cut(s) 1165, 1692
ApaLI GTGCAC 1 cut(s) 540
ApeKI GCWGC 7 cut(s) 303, 523, 614, 888, 1124, 1433, 1705
ApoI RAATTY 3 cut(s) 90, 407, 1027
AseI ATTAAT 1 cut(s) 2063
AsiGI ACCGGT 1 cut(s) 2813
Asp700I GAANNNNTTC 5 cut(s) 222, 337, 632, 1016, 1962
AspLEI GCGC 5 cut(s) 647, 1140, 1705, 1920, 2553
AspS9I GGNCC 3 cut(s) 41, 442, 1987
AsuC2I CCSGG 1 cut(s) 1691
AsuHPI GGTGA 4 cut(s) 464, 545, 965, 1492
AvaI CYCGRG 1 cut(s) 2396
AvaII GGWCC 3 cut(s) 41, 442, 1987
AxyI CCTNAGG 1 cut(s) 134
BaeGI GKGCMC 1 cut(s) 544
BaeI ACNNNNGTAYC 2 cut(s) 1791, 1824
BalI TGGCCA 1 cut(s) 1167
BanII GRGCYC 1 cut(s) 975
BauI CACGAG 1 cut(s) 1872
BbrPI CACGTG 1 cut(s) 545
BbsI GAAGAC 3 cut(s) 590, 1019, 1687
Bbv12I GWGCWC 3 cut(s) 544, 2226, 2613
BbvI GCAGC 7 cut(s) 290, 510, 626, 900, 1111, 1445, 1692
BceAI ACGGC 1 cut(s) 141
BciT130I CCWGG 5 cut(s) 364, 593, 1804, 1847, 1928
BciVI GTATCC 2 cut(s) 1484, 2289
BclI TGATCA 1 cut(s) 256
BcnI CCSGG 1 cut(s) 1691
BcoDI GTCTC 3 cut(s) 382, 1433, 2415
BfaI CTAG 5 cut(s) 467, 677, 1821, 2387, 2750
BfmI CTRYAG 3 cut(s) 794, 1205, 1598
BfoI RGCGCY 1 cut(s) 2554
BfuAI ACCTGC 1 cut(s) 2331
BfuI GTATCC 2 cut(s) 1484, 2289
BisI GCNGC 8 cut(s) 304, 524, 615, 889, 1125, 1434, 1576, 1706
BlsI GCNGC 8 cut(s) 305, 525, 616, 890, 1126, 1435, 1577, 1707
BmcAI AGTACT 1 cut(s) 1224
Bme1390I CCNGG 6 cut(s) 364, 593, 1691, 1804, 1847, 1928
Bme18I GGWCC 3 cut(s) 41, 442, 1987
BmeT110I CYCGRG 1 cut(s) 2396
BmgT120I GGNCC 3 cut(s) 41, 442, 1987
BmiI GGNNCC 2 cut(s) 972, 2812
BmrFI CCNGG 6 cut(s) 364, 593, 1691, 1804, 1847, 1928
BmrI ACTGGG 2 cut(s) 1745, 2781
BmsI GCATC 5 cut(s) 136, 315, 601, 1293, 2553
BmuI ACTGGG 2 cut(s) 1745, 2781
BpiI GAAGAC 3 cut(s) 590, 1019, 1687
BplI GAGNNNNNCTC 4 cut(s) 885, 917, 2729, 2761
BpmI CTGGAG 4 cut(s) 134, 346, 969, 2585
Bpu10I CCTNAGC 1 cut(s) 1280
BpuEI CTTGAG 5 cut(s) 415, 2444, 2597, 2740, 2779
BpuMI CCSGG 1 cut(s) 1691
BsaAI YACGTR 1 cut(s) 545
BsaJI CCNNGG 5 cut(s) 591, 1021, 1803, 2047, 2806
BsaWI WCCGGW 1 cut(s) 2813
BsaXI ACNNNNNCTCC 4 cut(s) 942, 972, 989, 1019
Bse118I RCCGGY 2 cut(s) 1694, 2813
Bse1I ACTGG 6 cut(s) 117, 731, 1751, 1889, 2568, 2787
Bse21I CCTNAGG 1 cut(s) 134
Bse3DI GCAATG 3 cut(s) 866, 2282, 2677
BseBI CCWGG 5 cut(s) 364, 593, 1804, 1847, 1928
BseDI CCNNGG 5 cut(s) 591, 1021, 1803, 2047, 2806
BseGI GGATG 7 cut(s) 829, 851, 1341, 1815, 2147, 2356, 2544
BseMI GCAATG 3 cut(s) 866, 2282, 2677
BseMII CTCAG 7 cut(s) 125, 372, 677, 1246, 1271, 1653, 1778
BseNI ACTGG 6 cut(s) 117, 731, 1751, 1889, 2568, 2787
BseRI GAGGAG 4 cut(s) 120, 817, 1029, 2226
BseSI GKGCMC 1 cut(s) 544
BseX3I CGGCCG 1 cut(s) 1692
BseXI GCAGC 7 cut(s) 290, 510, 626, 900, 1111, 1445, 1692
BseYI CCCAGC 1 cut(s) 2074
BsgI GTGCAG 1 cut(s) 33
Bsh1236I CGCG 1 cut(s) 645
Bsh1285I CGRYCG 1 cut(s) 1695
BshFI GGCC 2 cut(s) 1167, 1694
BshTI ACCGGT 1 cut(s) 2813
BsiEI CGRYCG 1 cut(s) 1695
BsiHKAI GWGCWC 3 cut(s) 544, 2226, 2613
BsiHKCI CYCGRG 1 cut(s) 2396
BsiSI CCGG 4 cut(s) 1691, 1695, 2548, 2814
BsmAI GTCTC 3 cut(s) 382, 1433, 2415
BsmI GAATGC 2 cut(s) 856, 1867
BsnI GGCC 2 cut(s) 1167, 1694
BsoBI CYCGRG 1 cut(s) 2396
Bsp1286I GDGCHC 4 cut(s) 544, 975, 2226, 2613
Bsp1407I TGTACA 1 cut(s) 1606
Bsp143I GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
BspACI CCGC 3 cut(s) 1573, 1576, 2445
BspANI GGCC 2 cut(s) 1167, 1694
BspCNI CTCAG 7 cut(s) 126, 373, 676, 1245, 1272, 1654, 1779
BspFNI CGCG 1 cut(s) 645
BspHI TCATGA 1 cut(s) 2796
BspLI GGNNCC 2 cut(s) 972, 2812
BspMAI CTGCAG 2 cut(s) 1209, 1602
BspMI ACCTGC 1 cut(s) 2331
BspPI GGATC 4 cut(s) 374, 659, 1305, 2348
BspQI GCTCTTC 1 cut(s) 2795
BsrDI GCAATG 3 cut(s) 866, 2282, 2677
BsrFI RCCGGY 2 cut(s) 1694, 2813
BsrGI TGTACA 1 cut(s) 1606
BsrI ACTGG 6 cut(s) 117, 731, 1751, 1889, 2568, 2787
BssAI RCCGGY 2 cut(s) 1694, 2813
BssECI CCNNGG 5 cut(s) 591, 1021, 1803, 2047, 2806
BssMI GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
BssSI CACGAG 1 cut(s) 1872
BssT1I CCWWGG 3 cut(s) 1021, 2047, 2806
Bst2BI CACGAG 1 cut(s) 1872
Bst2UI CCWGG 5 cut(s) 364, 593, 1804, 1847, 1928
Bst4CI ACNGT 7 cut(s) 69, 658, 1005, 1172, 1410, 1534, 1657
BstAUI TGTACA 1 cut(s) 1606
BstBAI YACGTR 1 cut(s) 545
BstC8I GCNNGC 1 cut(s) 1696
BstF5I GGATG 7 cut(s) 829, 851, 1341, 1815, 2147, 2356, 2544
BstFNI CGCG 1 cut(s) 645
BstH2I RGCGCY 1 cut(s) 2554
BstHHI GCGC 5 cut(s) 647, 1140, 1705, 1920, 2553
BstKTI GATC 8 cut(s) 259, 369, 654, 1300, 1483, 1519, 2211, 2356
BstMAI GTCTC 3 cut(s) 382, 1433, 2415
BstMBI GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
BstMCI CGRYCG 1 cut(s) 1695
BstMWI GCNNNNNNNGC 8 cut(s) 34, 505, 923, 1103, 1318, 1535, 1700, 2550
BstNI CCWGG 5 cut(s) 364, 593, 1804, 1847, 1928
BstSCI CCNGG 6 cut(s) 362, 591, 1689, 1802, 1845, 1926
BstSFI CTRYAG 3 cut(s) 794, 1205, 1598
BstSLI GKGCMC 1 cut(s) 544
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 7 cut(s) 290, 510, 626, 900, 1111, 1445, 1692
BstV2I GAAGAC 3 cut(s) 590, 1019, 1687
BstXI CCANNNNNNTGG 1 cut(s) 1175
BstZI CGGCCG 1 cut(s) 1692
Bsu36I CCTNAGG 1 cut(s) 134
BsuI GTATCC 2 cut(s) 1484, 2289
BsuRI GGCC 2 cut(s) 1167, 1694
BtsCI GGATG 7 cut(s) 829, 851, 1341, 1815, 2147, 2356, 2544
BtsI GCAGTG 3 cut(s) 1556, 1595, 2062
BtsIMutI CAGTG 6 cut(s) 654, 1556, 1595, 2062, 2199, 2561
BveI ACCTGC 1 cut(s) 2331
Cac8I GCNNGC 1 cut(s) 1696
CaiI CAGNNNCTG 2 cut(s) 1661, 1846
CciI TCATGA 1 cut(s) 2796
CfoI GCGC 5 cut(s) 647, 1140, 1705, 1920, 2553
Cfr10I RCCGGY 2 cut(s) 1694, 2813
Cfr13I GGNCC 3 cut(s) 41, 442, 1987
CseI GACGC 1 cut(s) 464
Csp6I GTAC 8 cut(s) 759, 841, 1223, 1276, 1607, 2260, 2390, 2573
CspAI ACCGGT 1 cut(s) 2813
CspCI CAANNNNNGTGG 2 cut(s) 2032, 2067
CviQI GTAC 8 cut(s) 759, 841, 1223, 1276, 1607, 2260, 2390, 2573
DpnI GATC 8 cut(s) 258, 368, 653, 1299, 1482, 1518, 2210, 2355
DpnII GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
DraI TTTAAA 2 cut(s) 1740, 1779
EaeI YGGCCR 2 cut(s) 1165, 1692
EagI CGGCCG 1 cut(s) 1692
EciI GGCGGA 1 cut(s) 1562
EclXI CGGCCG 1 cut(s) 1692
Eco130I CCWWGG 3 cut(s) 1021, 2047, 2806
Eco24I GRGCYC 1 cut(s) 975
Eco47I GGWCC 3 cut(s) 41, 442, 1987
Eco52I CGGCCG 1 cut(s) 1692
Eco57I CTGAAG 4 cut(s) 324, 1823, 2175, 2234
Eco72I CACGTG 1 cut(s) 545
Eco81I CCTNAGG 1 cut(s) 134
Eco88I CYCGRG 1 cut(s) 2396
EcoO109I RGGNCCY 1 cut(s) 1987
EcoRI GAATTC 1 cut(s) 1027
EcoRII CCWGG 5 cut(s) 362, 591, 1802, 1845, 1926
EcoT14I CCWWGG 3 cut(s) 1021, 2047, 2806
EcoT22I ATGCAT 1 cut(s) 868
EcoT38I GRGCYC 1 cut(s) 975
ErhI CCWWGG 3 cut(s) 1021, 2047, 2806
FalI AAGNNNNNCTT 4 cut(s) 210, 242, 1720, 1752
FauNDI CATATG 2 cut(s) 1314, 1975
FbaI TGATCA 1 cut(s) 256
FblI GTMKAC 1 cut(s) 960
Fnu4HI GCNGC 8 cut(s) 304, 524, 615, 889, 1125, 1434, 1576, 1706
FokI GGATG 7 cut(s) 836, 858, 1348, 1802, 2134, 2363, 2531
FriOI GRGCYC 1 cut(s) 975
Fsp4HI GCNGC 8 cut(s) 304, 524, 615, 889, 1125, 1434, 1576, 1706
FspBI CTAG 5 cut(s) 467, 677, 1821, 2387, 2750
GlaI GCGC 5 cut(s) 646, 1139, 1704, 1919, 2552
GluI GCNGC 8 cut(s) 304, 524, 615, 889, 1125, 1434, 1576, 1706
GsaI CCCAGC 1 cut(s) 2078
GsuI CTGGAG 4 cut(s) 134, 346, 969, 2585
HaeII RGCGCY 1 cut(s) 2554
HaeIII GGCC 2 cut(s) 1167, 1694
HapII CCGG 4 cut(s) 1691, 1695, 2548, 2814
HgaI GACGC 1 cut(s) 464
HhaI GCGC 5 cut(s) 647, 1140, 1705, 1920, 2553
Hin6I GCGC 5 cut(s) 645, 1138, 1703, 1918, 2551
HinP1I GCGC 5 cut(s) 645, 1138, 1703, 1918, 2551
HincII GTYRAC 1 cut(s) 2044
HindII GTYRAC 1 cut(s) 2044
HindIII AAGCTT 3 cut(s) 35, 293, 1835
HinfI GANTC 6 cut(s) 396, 944, 989, 1426, 1683, 2647
HpaII CCGG 4 cut(s) 1691, 1695, 2548, 2814
HphI GGTGA 4 cut(s) 464, 545, 965, 1492
Hpy166II GTNNAC 6 cut(s) 237, 542, 961, 1653, 1765, 2044
Hpy188I TCNGA 8 cut(s) 343, 371, 382, 725, 1521, 1788, 1842, 2485
Hpy8I GTNNAC 6 cut(s) 237, 542, 961, 1653, 1765, 2044
HpyAV CCTTC 7 cut(s) 251, 1449, 2027, 2091, 2310, 2411, 2747
HpyCH4III ACNGT 7 cut(s) 69, 658, 1005, 1172, 1410, 1534, 1657
HpyCH4IV ACGT 3 cut(s) 544, 1636, 1912
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 505, 923, 1103, 1318, 1535, 1700, 2550
HpySE526I ACGT 3 cut(s) 544, 1636, 1912
HspAI GCGC 5 cut(s) 645, 1138, 1703, 1918, 2551
KroI GCCGGC 1 cut(s) 1694
KroNI GCCGGC 1 cut(s) 1696
Ksp22I TGATCA 1 cut(s) 256
Kzo9I GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
LguI GCTCTTC 1 cut(s) 2795
LmnI GCTCC 5 cut(s) 714, 970, 1419, 2221, 2337
Lsp1109I GCAGC 7 cut(s) 290, 510, 626, 900, 1111, 1445, 1692
LweI GCATC 5 cut(s) 136, 315, 601, 1293, 2553
MaeI CTAG 5 cut(s) 467, 677, 1821, 2387, 2750
MaeII ACGT 3 cut(s) 544, 1636, 1912
MaeIII GTNAC 7 cut(s) 452, 658, 999, 1459, 1552, 1876, 2710
MalI GATC 8 cut(s) 258, 368, 653, 1299, 1482, 1518, 2210, 2355
MboI GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
MfeI CAATTG 1 cut(s) 2090
MhlI GDGCHC 4 cut(s) 544, 975, 2226, 2613
MlsI TGGCCA 1 cut(s) 1167
MluNI TGGCCA 1 cut(s) 1167
MlyI GAGTC 4 cut(s) 390, 953, 1677, 2641
MmeI TCCRAC 3 cut(s) 1698, 1933, 2798
Mox20I TGGCCA 1 cut(s) 1167
Mph1103I ATGCAT 1 cut(s) 868
MroNI GCCGGC 1 cut(s) 1694
MroXI GAANNNNTTC 5 cut(s) 222, 337, 632, 1016, 1962
MscI TGGCCA 1 cut(s) 1167
MslI CAYNNNNRTG 4 cut(s) 213, 258, 450, 1872
Msp20I TGGCCA 1 cut(s) 1167
MspA1I CMGCKG 2 cut(s) 769, 1448
MspI CCGG 4 cut(s) 1691, 1695, 2548, 2814
MspR9I CCNGG 6 cut(s) 364, 593, 1691, 1804, 1847, 1928
MunI CAATTG 1 cut(s) 2090
Mva1269I GAATGC 2 cut(s) 856, 1867
MvaI CCWGG 5 cut(s) 364, 593, 1804, 1847, 1928
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 8 cut(s) 34, 505, 923, 1103, 1318, 1535, 1700, 2550
NaeI GCCGGC 1 cut(s) 1696
NciI CCSGG 1 cut(s) 1691
NdeI CATATG 2 cut(s) 1314, 1975
NdeII GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
NgoMIV GCCGGC 1 cut(s) 1694
NlaIV GGNNCC 2 cut(s) 972, 2812
NmeAIII GCCGAG 1 cut(s) 917
NmuCI GTSAC 2 cut(s) 452, 2710
NsiI ATGCAT 1 cut(s) 868
PaeR7I CTCGAG 1 cut(s) 2396
PagI TCATGA 1 cut(s) 2796
PciSI GCTCTTC 1 cut(s) 2795
PctI GAATGC 2 cut(s) 856, 1867
PdiI GCCGGC 1 cut(s) 1696
PdmI GAANNNNTTC 5 cut(s) 222, 337, 632, 1016, 1962
PfeI GAWTC 2 cut(s) 989, 1426
PfoI TCCNGGA 1 cut(s) 362
PinAI ACCGGT 1 cut(s) 2813
PkrI GCNGC 8 cut(s) 305, 525, 616, 890, 1126, 1435, 1577, 1707
PleI GAGTC 4 cut(s) 390, 952, 1677, 2641
PmaCI CACGTG 1 cut(s) 545
PmlI CACGTG 1 cut(s) 545
PpsI GAGTC 4 cut(s) 390, 952, 1677, 2641
Ppu21I YACGTR 1 cut(s) 545
PpuMI RGGWCCY 1 cut(s) 1987
PshBI ATTAAT 1 cut(s) 2063
Psp5II RGGWCCY 1 cut(s) 1987
Psp6I CCWGG 5 cut(s) 362, 591, 1802, 1845, 1926
PspCI CACGTG 1 cut(s) 545
PspFI CCCAGC 1 cut(s) 2074
PspGI CCWGG 5 cut(s) 362, 591, 1802, 1845, 1926
PspN4I GGNNCC 2 cut(s) 972, 2812
PspPI GGNCC 3 cut(s) 41, 442, 1987
PspPPI RGGWCCY 1 cut(s) 1987
PstI CTGCAG 2 cut(s) 1209, 1602
PstNI CAGNNNCTG 2 cut(s) 1661, 1846
PvuII CAGCTG 2 cut(s) 769, 1448
RsaI GTAC 8 cut(s) 760, 842, 1224, 1277, 1608, 2261, 2391, 2574
RsaNI GTAC 8 cut(s) 759, 841, 1223, 1276, 1607, 2260, 2390, 2573
RseI CAYNNNNRTG 4 cut(s) 213, 258, 450, 1872
SapI GCTCTTC 1 cut(s) 2795
SatI GCNGC 8 cut(s) 304, 524, 615, 889, 1125, 1434, 1576, 1706
Sau3AI GATC 8 cut(s) 256, 366, 651, 1297, 1480, 1516, 2208, 2353
Sau96I GGNCC 3 cut(s) 41, 442, 1987
ScaI AGTACT 1 cut(s) 1224
SchI GAGTC 4 cut(s) 390, 953, 1677, 2641
ScrFI CCNGG 6 cut(s) 364, 593, 1691, 1804, 1847, 1928
SduI GDGCHC 4 cut(s) 544, 975, 2226, 2613
SfaNI GCATC 5 cut(s) 136, 315, 601, 1293, 2553
SfcI CTRYAG 3 cut(s) 794, 1205, 1598
Sfr274I CTCGAG 1 cut(s) 2396
SinI GGWCC 3 cut(s) 41, 442, 1987
SlaI CTCGAG 1 cut(s) 2396
SmiMI CAYNNNNRTG 4 cut(s) 213, 258, 450, 1872
SmlI CTYRAG 6 cut(s) 430, 2396, 2459, 2612, 2719, 2758
SmoI CTYRAG 6 cut(s) 430, 2396, 2459, 2612, 2719, 2758
SsiI CCGC 3 cut(s) 1573, 1576, 2445
SspMI CTAG 5 cut(s) 467, 677, 1821, 2387, 2750
StyD4I CCNGG 6 cut(s) 362, 591, 1689, 1802, 1845, 1926
StyI CCWWGG 3 cut(s) 1021, 2047, 2806
TaaI ACNGT 7 cut(s) 69, 658, 1005, 1172, 1410, 1534, 1657
TaiI ACGT 3 cut(s) 547, 1639, 1915
TatI WGTACW 4 cut(s) 1222, 1606, 2259, 2389
TauI GCSGC 1 cut(s) 1578
TfiI GAWTC 2 cut(s) 989, 1426
TscAI CASTG 6 cut(s) 661, 1563, 1602, 2062, 2199, 2568
TseFI GTSAC 2 cut(s) 452, 2710
TseI GCWGC 7 cut(s) 303, 523, 614, 888, 1124, 1433, 1705
Tsp45I GTSAC 2 cut(s) 452, 2710
TspGWI ACGGA 2 cut(s) 858, 1478
TspRI CASTG 6 cut(s) 661, 1563, 1602, 2062, 2199, 2568
VneI GTGCAC 1 cut(s) 540
VpaK11BI GGWCC 3 cut(s) 41, 442, 1987
VspI ATTAAT 1 cut(s) 2063
XapI RAATTY 3 cut(s) 90, 407, 1027
XbaI TCTAGA 1 cut(s) 466
XcmI CCANNNNNNNNNTGG 2 cut(s) 990, 2191
XhoI CTCGAG 1 cut(s) 2396
XmiI GTMKAC 1 cut(s) 960
XmnI GAANNNNTTC 5 cut(s) 222, 337, 632, 1016, 1962
XspI CTAG 5 cut(s) 467, 677, 1821, 2387, 2750
ZrmI AGTACT 1 cut(s) 1224
Zsp2I ATGCAT 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.