RchiOBHm_Chr7g0211261

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
28492218 .. 28495061
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18899

Sequence Viewer

Length: 2844 bp
ATGGCGGAGAGTGCAGTAAAGTTTCTACTTGACAAGCTTGCACCTCTTTTCGAAAATGAGTTGCAACTTTTGAGAGGGGTTAGGGAAGAAATTTTGTATCTAAGAGGAGAACTGGAGCGCATGACGGCTTTCCTGAGGGTTGCTGATGCATATGAAGAGAGTGATGCGGAACTCAAAGTATGGGTTAAACAACTAAGAGACATTGCTCACGAAAGTGAAGATGTTCTTGATGAATTTACCCTTCTGCAAGCACATGATCATGGGGAGGGATTATATGGTTCAATCCATAAGCTTTCTTGCTGCATCAAGAATACAAAAGCTCGATATCGAATTGCTTCGGAGTTACGAGCCATAAACTCCAGGATCAAAAAAATCTCTGAGGTTCATAAGCGACTCCACCACAAATTCAATATGGCTGAACAAGGCTCAAGCTCCAAAAGTGCAGGTTACCTGTTGGAGGACCATCGAGGTGATGCTTTACTTCTAGAGAAAACTGATATAGTGGGCATAGACGAGCCTATTAAGCAGATGGTTGGGAGGCTGGTCAATGGTGGTTGTGGACGTGAGGTAGTTTCTGTGGCAGGAATGGGAGGAATGGGGAAAACTACCCTGGCGAAGCAAGTCTACGATGCAGCAGAAGTGAAGAAACATTTCAAATTATGTGCTTGGATCACTTTTACTCAGTCTTTCAAGCTAGCGGAACTTCTCAAAGACATCGTTCAACAGCTCCACCAAGCAATCCGAAGTCCAGTTCCACAAGAAATCAATAGCATGAATACCAACCAGCTGAAAACAATAATTAAAGACTTCCTACAGAAGAGGAGGTATCTCATTGTCTTGGATGATGTGTGGCACTTATATGGATGGGATGCCTTGAAGTATGCACTGCCTAATAATATTTACGGCAGCAGAGTGATACTAACTACTCGAAATGCAGATATAGCCTCCACAACAAGCACAGAATCTGGAGGTGAAGTCTATACTTTGGAGCCCTTGCCCCCAGTGGAGTCATGGGAGCTCCTGTGCAAGAAGACATTCCAAGGGAATTCCTGCCCTCCACATTTAGAGAAAATCTGTAACTATGTTCTGAGAAAGTGTGAGGGGCTACCCCTTGCTATTGTGGCAATTAGTGGAGTTCTGGCTGCTAAAGATAAGCGCAGAATTGATGAGTGGGAAATGGTTGGCCACAGTCTCGGGGCTGAAATTGAGGGCAATGACAAACTGCAGGACTTGAAGAAAGTACTTTCACTCAGTTTCAATGATTTACCATACTATCTAAAATCGTGCTTCTTGTACCTGAGCATCTTTCCAGAGGACCATCTAATTAAGCATATGAGGCTTATTCGATTATGGATGGCAGAGGGCTTCATTGAAGAAAAACAAGGAAAGACATTGGAAGAGGTTGCAGAGGATTACCTCAATGAACTATTGAATAGGAGCATGATTCAAGCAGCAGAGACAACAGCTGATGGAAGGGTCACAAAATTTCGTATCCATGATCTCTTCCGCGAAATTATCACCTCCAAGACAAGAAGTCAGAACTTTGCCACAATAGCCAAAGAGCAGAATGTAACATTGCCAGCAAAAATCCGTCGCCTGTCAATACATAACACACTGCAATATGTTCAGACAAACAGGTGTGCTTCTCAACTACGTTCTCTTTTTATGTTCACAGTTGCTGAGAAGCCATCACTACAAAGACTATTCCCAGCCGGCTTTGCGCTGCTTAATGTGTTAGATTTGCAAAGTACACCTTTAAATGTTTTCCCAGTTGAAGTTGTGAATCTTTACTTTTTAAAGTATCTGAGCTTGAGAGATACCAGGGTAAAAACCATTCCAAGATTTATAGGGAAGCTTCAGAACCTGGAAACTTTGGATCTTAAGCATTCTCGAGTTACTGAACTCCCAGTTGAAATTCTGAAACTCCAACATCTGCGCTATCTCTTGGTATATCGTTATGAGTTTGTTCCTTACGAAGATTTTCACTCAACATATGGTTTTAAGGTCCTTGCAAAAATAGGAGCTTTGAAATCCCTTCAAAAGCTATGTTTTATTGAGGTGAACCAAGGTGGCAGCGCATTATTGAGAGAGCTGGGGAAACTAGTTCAGTTGAGAAGGTTAGGCATTGTTAAGATGAGGAAAAAAGATGGCAAGGCTCTTTCTTCATCCATTGAAAAGTTGTCCAAACTTTATGCATTGTCCATAACTTCAGTGGAAGAAGACGAGATCATTGATTTGCAGCACCTGTGTTCTCCTCCTCTATTGCTTCAGCATTTGTACTTGCGAGGCAGACTGGAAGCATTACCTCACTGGATACCTTCTCTCCATAGCCTCGTCAAGTTGTATTTGAAATGGAGCAGGTTAAGGGATGATCCACTTGCATTCCTTCAGTATTTGCCCAATCTAGTACATCTTGAGTTGTGTCAGGTTTTTGAAGGAGACACACTATGTTTTGGAGCCGGCGGATTTAAGAAGCTCAAGCATTTATGCCTCGATAAATCTGATGAACTTCGATGCATAGAGATGGAGGTGGGAACAATGCCTTGTATTGAAAATCTAATCATCCGGCGCTGTAAATCACTGGAGAAAGTCCCATCAGGCATTGAACATCTCATCAAACTAAAGTTGCTTAAGTTTTTTGATATGCCAGAAAAACTAATCAAGACTCTACTTCCACATCAGCATGGCAATGATTATTGGAAAGTTGCGCATGTCCCAGAAGTTTATGTCACCTACTTGAGAGAGTTTGGGTGGGAAGTATTCTCATTAGAGGGCTTGAGTGAGACACAAATCTCTTCTCAACCCAGTTCTGTCATGAAGAGCATTGGAACTGGTTGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

947

Amino Acids

108.39

Weight (kDa)

8.7

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 2e-23 Rx N-terminal domain
NB-ARC PF00931 172 - 350 3.6e-42 NB-ARC domain
AAA_16 PF13191 177 - 283 2.8e-07 AAA ATPase domain
WHD_DRP PF23559 435 - 506 1.6e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 550 - 878 1.6e-45 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2709
Acc36I ACCTGC 2 cut(s) 434, 2349
AccI GTMKAC 1 cut(s) 624
AccII CGCG 1 cut(s) 1509
AciI CCGC 5 cut(s) 5, 167, 698, 1507, 2463
AclWI GGATC 4 cut(s) 371, 677, 1884, 2366
AcoI YGGCCR 1 cut(s) 1183
AcsI RAATTY 6 cut(s) 90, 233, 404, 1045, 1484, 1914
AcuI CTGAAG 4 cut(s) 1841, 2193, 2252, 2372
AfaI GTAC 5 cut(s) 1242, 1295, 1750, 2279, 2409
AfiI CCNNNNNNNGG 1 cut(s) 457
AflII CTTAAG 2 cut(s) 1880, 2630
AhdI GACNNNNNGTC 1 cut(s) 1533
AhlI ACTAGT 1 cut(s) 2101
AjiI CACGTC 1 cut(s) 563
AjnI CCWGG 4 cut(s) 359, 609, 1820, 1863
AleI CACNNNNGTG 1 cut(s) 213
Alw21I GWGCWC 1 cut(s) 1020
Alw26I GTCTC 5 cut(s) 192, 1196, 1451, 2433, 2777
AlwI GGATC 4 cut(s) 371, 677, 1884, 2366
AlwNI CAGNNNCTG 4 cut(s) 965, 1679, 1864, 2245
Ama87I CYCGRG 2 cut(s) 1193, 1890
AoxI GGCC 1 cut(s) 1183
ApeKI GCWGC 8 cut(s) 300, 632, 906, 1142, 1451, 1723, 2073, 2239
ApoI RAATTY 6 cut(s) 90, 233, 404, 1045, 1484, 1914
Asp700I GAANNNNTTC 5 cut(s) 222, 334, 650, 1034, 1980
AspLEI GCGC 7 cut(s) 120, 1158, 1723, 1938, 2078, 2571, 2710
AspS9I GGNCC 3 cut(s) 460, 1315, 2005
AsuHPI GGTGA 5 cut(s) 482, 983, 1510, 2071, 2722
AsuII TTCGAA 1 cut(s) 51
AsuNHI GCTAGC 1 cut(s) 694
AvaI CYCGRG 2 cut(s) 1193, 1890
AvaII GGWCC 3 cut(s) 460, 1315, 2005
AxyI CCTNAGG 1 cut(s) 134
BaeI ACNNNNGTAYC 2 cut(s) 1809, 1842
BalI TGGCCA 1 cut(s) 1185
BanII GRGCYC 2 cut(s) 993, 1020
BarI GAAGNNNNNNTAC 2 cut(s) 608, 640
BbsI GAAGAC 2 cut(s) 1037, 2226
Bbv12I GWGCWC 1 cut(s) 1020
BbvI GCAGC 8 cut(s) 287, 644, 918, 1129, 1463, 1710, 2085, 2251
BceAI ACGGC 2 cut(s) 141, 919
BciT130I CCWGG 4 cut(s) 361, 611, 1822, 1865
BciVI GTATCC 2 cut(s) 1502, 2307
BclI TGATCA 1 cut(s) 256
BcoDI GTCTC 5 cut(s) 192, 1196, 1451, 2433, 2777
BcuI ACTAGT 1 cut(s) 2101
BfaI CTAG 4 cut(s) 485, 695, 2102, 2405
BfmI CTRYAG 2 cut(s) 812, 1223
BfoI RGCGCY 1 cut(s) 2572
BfrI CTTAAG 2 cut(s) 1880, 2630
BfuAI ACCTGC 2 cut(s) 434, 2349
BfuI GTATCC 2 cut(s) 1502, 2307
BisI GCNGC 8 cut(s) 301, 633, 907, 1143, 1452, 1724, 2074, 2240
BlsI GCNGC 8 cut(s) 302, 634, 908, 1144, 1453, 1725, 2075, 2241
BmcAI AGTACT 1 cut(s) 1242
Bme1390I CCNGG 4 cut(s) 361, 611, 1822, 1865
Bme18I GGWCC 3 cut(s) 460, 1315, 2005
BmeRI GACNNNNNGTC 1 cut(s) 1533
BmeT110I CYCGRG 2 cut(s) 1193, 1890
BmgBI CACGTC 1 cut(s) 563
BmgT120I GGNCC 3 cut(s) 460, 1315, 2005
BmiI GGNNCC 2 cut(s) 990, 2458
BmrFI CCNGG 4 cut(s) 361, 611, 1822, 1865
BmrI ACTGGG 4 cut(s) 995, 1763, 1901, 2799
BmsI GCATC 8 cut(s) 136, 154, 312, 463, 619, 859, 1311, 2504
BmtI GCTAGC 1 cut(s) 698
BmuI ACTGGG 4 cut(s) 995, 1763, 1901, 2799
BpiI GAAGAC 2 cut(s) 1037, 2226
BpmI CTGGAG 4 cut(s) 134, 343, 987, 2603
Bpu10I CCTNAGC 1 cut(s) 1298
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 6 cut(s) 412, 1831, 2435, 2462, 2758, 2797
BsaJI CCNNGG 4 cut(s) 609, 1039, 1821, 2065
BsaXI ACNNNNNCTCC 6 cut(s) 960, 990, 1007, 1037, 2307, 2337
Bsc4I CCNNNNNNNGG 1 cut(s) 457
Bse118I RCCGGY 2 cut(s) 1712, 2459
Bse21I CCTNAGG 1 cut(s) 134
Bse3DI GCAATG 4 cut(s) 201, 1219, 1574, 2695
BseBI CCWGG 4 cut(s) 361, 611, 1822, 1865
BseDI CCNNGG 4 cut(s) 609, 1039, 1821, 2065
BseGI GGATG 7 cut(s) 847, 869, 874, 1359, 2165, 2374, 2562
BseLI CCNNNNNNNGG 1 cut(s) 457
BseMI GCAATG 4 cut(s) 201, 1219, 1574, 2695
BseMII CTCAG 8 cut(s) 125, 369, 695, 1079, 1264, 1289, 1671, 1796
BseRI GAGGAG 4 cut(s) 120, 835, 2244, 2247
BseXI GCAGC 8 cut(s) 287, 644, 918, 1129, 1463, 1710, 2085, 2251
BseYI CCCAGC 2 cut(s) 1708, 2092
BsgI GTGCAG 2 cut(s) 33, 462
Bsh1236I CGCG 1 cut(s) 1509
BshFI GGCC 1 cut(s) 1185
BsiHKAI GWGCWC 1 cut(s) 1020
BsiHKCI CYCGRG 2 cut(s) 1193, 1890
BsiSI CCGG 3 cut(s) 1713, 2460, 2566
BslFI GGGAC 2 cut(s) 2576, 2699
BslI CCNNNNNNNGG 1 cut(s) 457
BsmAI GTCTC 5 cut(s) 192, 1196, 1451, 2433, 2777
BsmFI GGGAC 2 cut(s) 2576, 2699
BsmI GAATGC 2 cut(s) 1885, 2381
BsnI GGCC 1 cut(s) 1185
BsoBI CYCGRG 2 cut(s) 1193, 1890
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 993, 1020
Bsp143I GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
BspACI CCGC 5 cut(s) 5, 167, 698, 1507, 2463
BspANI GGCC 1 cut(s) 1185
BspCNI CTCAG 8 cut(s) 126, 370, 694, 1080, 1263, 1290, 1672, 1797
BspFNI CGCG 1 cut(s) 1509
BspHI TCATGA 1 cut(s) 2814
BspLI GGNNCC 2 cut(s) 990, 2458
BspMAI CTGCAG 1 cut(s) 1227
BspMI ACCTGC 2 cut(s) 434, 2349
BspOI GCTAGC 1 cut(s) 698
BspPI GGATC 4 cut(s) 371, 677, 1884, 2366
BspQI GCTCTTC 1 cut(s) 2813
BspT104I TTCGAA 1 cut(s) 51
BspTI CTTAAG 2 cut(s) 1880, 2630
BsrDI GCAATG 4 cut(s) 201, 1219, 1574, 2695
BsrFI RCCGGY 2 cut(s) 1712, 2459
BssAI RCCGGY 2 cut(s) 1712, 2459
BssECI CCNNGG 4 cut(s) 609, 1039, 1821, 2065
BssMI GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
BssT1I CCWWGG 2 cut(s) 1039, 2065
Bst2UI CCWGG 4 cut(s) 361, 611, 1822, 1865
Bst4CI ACNGT 2 cut(s) 1190, 1675
Bst6I CTCTTC 6 cut(s) 150, 812, 1392, 1508, 2800, 2813
BstAFI CTTAAG 2 cut(s) 1880, 2630
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 6 cut(s) 39, 249, 696, 1581, 1714, 2461
BstEII GGTNACC 1 cut(s) 446
BstENI CCTNNNNNAGG 1 cut(s) 455
BstF5I GGATG 7 cut(s) 847, 869, 874, 1359, 2165, 2374, 2562
BstFNI CGCG 1 cut(s) 1509
BstH2I RGCGCY 1 cut(s) 2572
BstHHI GCGC 7 cut(s) 120, 1158, 1723, 1938, 2078, 2571, 2710
BstKTI GATC 7 cut(s) 259, 366, 672, 1501, 1879, 2229, 2374
BstMAI GTCTC 5 cut(s) 192, 1196, 1451, 2433, 2777
BstMBI GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
BstMWI GCNNNNNNNGC 7 cut(s) 11, 523, 941, 1121, 1336, 1553, 1718
BstNI CCWGG 4 cut(s) 361, 611, 1822, 1865
BstNSI RCATGY 1 cut(s) 2714
BstPI GGTNACC 1 cut(s) 446
BstSCI CCNGG 4 cut(s) 359, 609, 1820, 1863
BstSFI CTRYAG 2 cut(s) 812, 1223
BstUI CGCG 1 cut(s) 1509
BstV1I GCAGC 8 cut(s) 287, 644, 918, 1129, 1463, 1710, 2085, 2251
BstV2I GAAGAC 2 cut(s) 1037, 2226
BstX2I RGATCY 1 cut(s) 1876
BstYI RGATCY 1 cut(s) 1876
Bsu36I CCTNAGG 1 cut(s) 134
BsuI GTATCC 2 cut(s) 1502, 2307
BsuRI GGCC 1 cut(s) 1185
BtrI CACGTC 1 cut(s) 563
BtsCI GGATG 7 cut(s) 847, 869, 874, 1359, 2165, 2374, 2562
BtsI GCAGTG 2 cut(s) 884, 1613
BtsIMutI CAGTG 6 cut(s) 884, 1008, 1613, 2217, 2308, 2579
BveI ACCTGC 2 cut(s) 434, 2349
Cac8I GCNNGC 6 cut(s) 39, 249, 696, 1581, 1714, 2461
CaiI CAGNNNCTG 4 cut(s) 965, 1679, 1864, 2245
CciI TCATGA 1 cut(s) 2814
CfoI GCGC 7 cut(s) 120, 1158, 1723, 1938, 2078, 2571, 2710
Cfr10I RCCGGY 2 cut(s) 1712, 2459
Cfr13I GGNCC 3 cut(s) 460, 1315, 2005
Csp6I GTAC 5 cut(s) 1241, 1294, 1749, 2278, 2408
CviQI GTAC 5 cut(s) 1241, 1294, 1749, 2278, 2408
DpnI GATC 7 cut(s) 258, 365, 671, 1500, 1878, 2228, 2373
DpnII GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
DraI TTTAAA 2 cut(s) 1758, 1797
DriI GACNNNNNGTC 1 cut(s) 1533
EaeI YGGCCR 1 cut(s) 1183
Eam1104I CTCTTC 6 cut(s) 150, 812, 1392, 1508, 2800, 2813
Eam1105I GACNNNNNGTC 1 cut(s) 1533
EarI CTCTTC 6 cut(s) 150, 812, 1392, 1508, 2800, 2813
EciI GGCGGA 2 cut(s) 20, 2478
Ecl136II GAGCTC 1 cut(s) 1018
Eco130I CCWWGG 2 cut(s) 1039, 2065
Eco24I GRGCYC 2 cut(s) 993, 1020
Eco32I GATATC 1 cut(s) 326
Eco47I GGWCC 3 cut(s) 460, 1315, 2005
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 4 cut(s) 1841, 2193, 2252, 2372
Eco81I CCTNAGG 1 cut(s) 134
Eco88I CYCGRG 2 cut(s) 1193, 1890
Eco91I GGTNACC 1 cut(s) 446
EcoICRI GAGCTC 1 cut(s) 1018
EcoNI CCTNNNNNAGG 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 2005
EcoO65I GGTNACC 1 cut(s) 446
EcoRI GAATTC 1 cut(s) 1045
EcoRII CCWGG 4 cut(s) 359, 609, 1820, 1863
EcoRV GATATC 1 cut(s) 326
EcoT14I CCWWGG 2 cut(s) 1039, 2065
EcoT22I ATGCAT 3 cut(s) 151, 2197, 2519
EcoT38I GRGCYC 2 cut(s) 993, 1020
ErhI CCWWGG 2 cut(s) 1039, 2065
FalI AAGNNNNNCTT 4 cut(s) 210, 242, 1738, 1770
FaqI GGGAC 2 cut(s) 2576, 2699
FauNDI CATATG 3 cut(s) 151, 1332, 1993
FbaI TGATCA 1 cut(s) 256
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 8 cut(s) 301, 633, 907, 1143, 1452, 1724, 2074, 2240
FokI GGATG 7 cut(s) 854, 876, 881, 1366, 2152, 2381, 2549
FriOI GRGCYC 2 cut(s) 993, 1020
Fsp4HI GCNGC 8 cut(s) 301, 633, 907, 1143, 1452, 1724, 2074, 2240
FspBI CTAG 4 cut(s) 485, 695, 2102, 2405
FspI TGCGCA 1 cut(s) 2709
GlaI GCGC 7 cut(s) 119, 1157, 1722, 1937, 2077, 2570, 2709
GluI GCNGC 8 cut(s) 301, 633, 907, 1143, 1452, 1724, 2074, 2240
GsaI CCCAGC 2 cut(s) 1712, 2096
GsuI CTGGAG 4 cut(s) 134, 343, 987, 2603
HaeII RGCGCY 1 cut(s) 2572
HaeIII GGCC 1 cut(s) 1185
HapII CCGG 3 cut(s) 1713, 2460, 2566
HhaI GCGC 7 cut(s) 120, 1158, 1723, 1938, 2078, 2571, 2710
Hin6I GCGC 7 cut(s) 118, 1156, 1721, 1936, 2076, 2569, 2708
HinP1I GCGC 7 cut(s) 118, 1156, 1721, 1936, 2076, 2569, 2708
HindIII AAGCTT 3 cut(s) 35, 290, 1853
HinfI GANTC 6 cut(s) 393, 962, 1007, 1444, 1783, 2665
HpaII CCGG 3 cut(s) 1713, 2460, 2566
HphI GGTGA 5 cut(s) 482, 983, 1510, 2071, 2722
Hpy166II GTNNAC 5 cut(s) 560, 625, 1671, 1751, 2062
Hpy8I GTNNAC 5 cut(s) 560, 625, 1671, 1751, 2062
Hpy99I CGWCG 1 cut(s) 1596
HpyAV CCTTC 7 cut(s) 251, 1467, 2045, 2109, 2328, 2396, 2429
HpyCH4III ACNGT 2 cut(s) 1190, 1675
HpyCH4IV ACGT 2 cut(s) 562, 1654
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 523, 941, 1121, 1336, 1553, 1718
HpySE526I ACGT 2 cut(s) 562, 1654
HspAI GCGC 7 cut(s) 118, 1156, 1721, 1936, 2076, 2569, 2708
KroI GCCGGC 2 cut(s) 1712, 2459
KroNI GCCGGC 2 cut(s) 1714, 2461
Ksp22I TGATCA 1 cut(s) 256
Kzo9I GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
LguI GCTCTTC 1 cut(s) 2813
Lsp1109I GCAGC 8 cut(s) 287, 644, 918, 1129, 1463, 1710, 2085, 2251
LweI GCATC 8 cut(s) 136, 154, 312, 463, 619, 859, 1311, 2504
MaeI CTAG 4 cut(s) 485, 695, 2102, 2405
MaeII ACGT 2 cut(s) 562, 1654
MaeIII GTNAC 7 cut(s) 342, 446, 1076, 1477, 1570, 1894, 2728
MalI GATC 7 cut(s) 258, 365, 671, 1500, 1878, 2228, 2373
MboI GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
MflI RGATCY 1 cut(s) 1876
MhlI GDGCHC 2 cut(s) 993, 1020
MlsI TGGCCA 1 cut(s) 1185
MluNI TGGCCA 1 cut(s) 1185
MlyI GAGTC 3 cut(s) 387, 1016, 2659
MmeI TCCRAC 3 cut(s) 435, 1951, 2816
Mox20I TGGCCA 1 cut(s) 1185
Mph1103I ATGCAT 3 cut(s) 151, 2197, 2519
MroNI GCCGGC 2 cut(s) 1712, 2459
MroXI GAANNNNTTC 5 cut(s) 222, 334, 650, 1034, 1980
MscI TGGCCA 1 cut(s) 1185
MslI CAYNNNNRTG 7 cut(s) 213, 258, 468, 858, 2522, 2682, 2688
Msp20I TGGCCA 1 cut(s) 1185
MspA1I CMGCKG 2 cut(s) 787, 1466
MspCI CTTAAG 2 cut(s) 1880, 2630
MspI CCGG 3 cut(s) 1713, 2460, 2566
MspR9I CCNGG 4 cut(s) 361, 611, 1822, 1865
Mva1269I GAATGC 2 cut(s) 1885, 2381
MvaI CCWGG 4 cut(s) 361, 611, 1822, 1865
MvnI CGCG 1 cut(s) 1509
MwoI GCNNNNNNNGC 7 cut(s) 11, 523, 941, 1121, 1336, 1553, 1718
NaeI GCCGGC 2 cut(s) 1714, 2461
NdeI CATATG 3 cut(s) 151, 1332, 1993
NdeII GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
NgoMIV GCCGGC 2 cut(s) 1712, 2459
NheI GCTAGC 1 cut(s) 694
NlaIV GGNNCC 2 cut(s) 990, 2458
NmuCI GTSAC 2 cut(s) 1477, 2728
NsbI TGCGCA 1 cut(s) 2709
NsiI ATGCAT 3 cut(s) 151, 2197, 2519
NspI RCATGY 1 cut(s) 2714
NspV TTCGAA 1 cut(s) 51
OliI CACNNNNGTG 1 cut(s) 213
PaeR7I CTCGAG 1 cut(s) 1890
PagI TCATGA 1 cut(s) 2814
PciSI GCTCTTC 1 cut(s) 2813
PctI GAATGC 2 cut(s) 1885, 2381
PdiI GCCGGC 2 cut(s) 1714, 2461
PdmI GAANNNNTTC 5 cut(s) 222, 334, 650, 1034, 1980
PfeI GAWTC 3 cut(s) 962, 1444, 1783
PfoI TCCNGGA 1 cut(s) 359
PkrI GCNGC 8 cut(s) 302, 634, 908, 1144, 1453, 1725, 2075, 2241
PleI GAGTC 3 cut(s) 387, 1015, 2659
PpsI GAGTC 3 cut(s) 387, 1015, 2659
PpuMI RGGWCCY 1 cut(s) 2005
Psp124BI GAGCTC 1 cut(s) 1020
Psp5II RGGWCCY 1 cut(s) 2005
Psp6I CCWGG 4 cut(s) 359, 609, 1820, 1863
PspEI GGTNACC 1 cut(s) 446
PspFI CCCAGC 2 cut(s) 1708, 2092
PspGI CCWGG 4 cut(s) 359, 609, 1820, 1863
PspN4I GGNNCC 2 cut(s) 990, 2458
PspPI GGNCC 3 cut(s) 460, 1315, 2005
PspPPI RGGWCCY 1 cut(s) 2005
PstI CTGCAG 1 cut(s) 1227
PstNI CAGNNNCTG 4 cut(s) 965, 1679, 1864, 2245
PsuI RGATCY 1 cut(s) 1876
PvuII CAGCTG 2 cut(s) 787, 1466
RsaI GTAC 5 cut(s) 1242, 1295, 1750, 2279, 2409
RsaNI GTAC 5 cut(s) 1241, 1294, 1749, 2278, 2408
RseI CAYNNNNRTG 7 cut(s) 213, 258, 468, 858, 2522, 2682, 2688
SacI GAGCTC 1 cut(s) 1020
SapI GCTCTTC 1 cut(s) 2813
SatI GCNGC 8 cut(s) 301, 633, 907, 1143, 1452, 1724, 2074, 2240
Sau3AI GATC 7 cut(s) 256, 363, 669, 1498, 1876, 2226, 2371
Sau96I GGNCC 3 cut(s) 460, 1315, 2005
ScaI AGTACT 1 cut(s) 1242
SchI GAGTC 3 cut(s) 387, 1016, 2659
ScrFI CCNGG 4 cut(s) 361, 611, 1822, 1865
SduI GDGCHC 2 cut(s) 993, 1020
SfaNI GCATC 8 cut(s) 136, 154, 312, 463, 619, 859, 1311, 2504
SfcI CTRYAG 2 cut(s) 812, 1223
Sfr274I CTCGAG 1 cut(s) 1890
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 3 cut(s) 460, 1315, 2005
SlaI CTCGAG 1 cut(s) 1890
SmiMI CAYNNNNRTG 7 cut(s) 213, 258, 468, 858, 2522, 2682, 2688
SmlI CTYRAG 9 cut(s) 427, 1810, 1880, 1890, 2414, 2477, 2630, 2737, 2776
SmoI CTYRAG 9 cut(s) 427, 1810, 1880, 1890, 2414, 2477, 2630, 2737, 2776
SpeI ACTAGT 1 cut(s) 2101
SsiI CCGC 5 cut(s) 5, 167, 698, 1507, 2463
SspI AATATT 1 cut(s) 898
SspMI CTAG 4 cut(s) 485, 695, 2102, 2405
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 4 cut(s) 359, 609, 1820, 1863
StyI CCWWGG 2 cut(s) 1039, 2065
TaaI ACNGT 2 cut(s) 1190, 1675
TaiI ACGT 2 cut(s) 565, 1657
TaqI TCGA 9 cut(s) 51, 322, 328, 466, 928, 1345, 1891, 2493, 2512
TatI WGTACW 4 cut(s) 1240, 1748, 2277, 2407
TfiI GAWTC 3 cut(s) 962, 1444, 1783
TscAI CASTG 6 cut(s) 891, 1008, 1620, 2217, 2315, 2586
TseFI GTSAC 2 cut(s) 1477, 2728
TseI GCWGC 8 cut(s) 300, 632, 906, 1142, 1451, 1723, 2073, 2239
Tsp45I GTSAC 2 cut(s) 1477, 2728
TspDTI ATGAA 9 cut(s) 168, 246, 374, 788, 1357, 1437, 2154, 2520, 2831
TspGWI ACGGA 1 cut(s) 1580
TspRI CASTG 6 cut(s) 891, 1008, 1620, 2217, 2315, 2586
Vha464I CTTAAG 2 cut(s) 1880, 2630
VpaK11BI GGWCC 3 cut(s) 460, 1315, 2005
XagI CCTNNNNNAGG 1 cut(s) 455
XapI RAATTY 6 cut(s) 90, 233, 404, 1045, 1484, 1914
XbaI TCTAGA 1 cut(s) 484
XceI RCATGY 1 cut(s) 2714
XcmI CCANNNNNNNNNTGG 2 cut(s) 1008, 2209
XhoI CTCGAG 1 cut(s) 1890
XmiI GTMKAC 1 cut(s) 624
XmnI GAANNNNTTC 5 cut(s) 222, 334, 650, 1034, 1980
XspI CTAG 4 cut(s) 485, 695, 2102, 2405
ZrmI AGTACT 1 cut(s) 1242
Zsp2I ATGCAT 3 cut(s) 151, 2197, 2519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.