Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 5 - 87 | 3.7e-24 | Rx N-terminal domain |
| NB-ARC | PF00931 | 171 - 350 | 4.2e-43 | NB-ARC domain |
| AAA_16 | PF13191 | 174 - 283 | 2.3e-06 | AAA ATPase domain |
| WHD_DRP | PF23559 | 435 - 506 | 2.7e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 550 - 878 | 1e-46 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1817 |
| AccB1I | GGYRCC | 3 cut(s) | 1817, 2075, 2590 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1382 |
| AccBSI | CCGCTC | 1 cut(s) | 118 |
| AccI | GTMKAC | 1 cut(s) | 1142 |
| AccII | CGCG | 1 cut(s) | 322 |
| AciI | CCGC | 6 cut(s) | 5, 14, 118, 742, 1109, 1594 |
| AclWI | GGATC | 2 cut(s) | 677, 2366 |
| AcoI | YGGCCR | 1 cut(s) | 1183 |
| AcsI | RAATTY | 4 cut(s) | 233, 404, 1961, 2498 |
| AcuI | CTGAAG | 4 cut(s) | 174, 957, 2193, 2252 |
| AfeI | AGCGCT | 1 cut(s) | 2570 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1382, 1839, 2771 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2670 |
| AjiI | CACGTC | 1 cut(s) | 563 |
| AjnI | CCWGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| Alw21I | GWGCWC | 1 cut(s) | 2094 |
| Alw26I | GTCTC | 5 cut(s) | 192, 385, 1862, 2291, 2433 |
| AlwI | GGATC | 2 cut(s) | 677, 2366 |
| Aor51HI | AGCGCT | 1 cut(s) | 2570 |
| AoxI | GGCC | 3 cut(s) | 746, 1183, 1577 |
| ApeKI | GCWGC | 6 cut(s) | 300, 526, 632, 1451, 2239, 2571 |
| ApoI | RAATTY | 4 cut(s) | 233, 404, 1961, 2498 |
| AseI | ATTAAT | 1 cut(s) | 2657 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 222, 334, 650, 1034, 2793 |
| Asp718I | GGTACC | 1 cut(s) | 1817 |
| AspLEI | GCGC | 5 cut(s) | 253, 322, 1593, 2274, 2571 |
| AspS9I | GGNCC | 1 cut(s) | 1876 |
| AsuHPI | GGTGA | 4 cut(s) | 482, 1510, 1837, 2722 |
| AvaII | GGWCC | 1 cut(s) | 1876 |
| AxyI | CCTNAGG | 1 cut(s) | 1311 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1809, 1842 |
| BalI | TGGCCA | 1 cut(s) | 1185 |
| BanI | GGYRCC | 3 cut(s) | 1817, 2075, 2590 |
| BanII | GRGCYC | 2 cut(s) | 993, 2094 |
| BbsI | GAAGAC | 2 cut(s) | 497, 1037 |
| Bbv12I | GWGCWC | 1 cut(s) | 2094 |
| BbvI | GCAGC | 6 cut(s) | 287, 538, 619, 1438, 2251, 2558 |
| BccI | CCATC | 9 cut(s) | 471, 589, 858, 1348, 1376, 1463, 2063, 2141, 2745 |
| BceAI | ACGGC | 2 cut(s) | 141, 2578 |
| BciT130I | CCWGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| BclI | TGATCA | 2 cut(s) | 256, 2803 |
| BcoDI | GTCTC | 5 cut(s) | 192, 385, 1862, 2291, 2433 |
| BfaI | CTAG | 6 cut(s) | 485, 542, 2102, 2405, 2768, 2811 |
| BfmI | CTRYAG | 3 cut(s) | 245, 633, 812 |
| BfoI | RGCGCY | 2 cut(s) | 2275, 2572 |
| BisI | GCNGC | 8 cut(s) | 301, 527, 633, 1109, 1452, 1594, 2240, 2572 |
| BlpI | GCTNAGC | 1 cut(s) | 2558 |
| BlsI | GCNGC | 8 cut(s) | 302, 528, 634, 1110, 1453, 1595, 2241, 2573 |
| BmcAI | AGTACT | 1 cut(s) | 1242 |
| Bme1390I | CCNGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| Bme18I | GGWCC | 1 cut(s) | 1876 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2670 |
| BmgBI | CACGTC | 1 cut(s) | 563 |
| BmgT120I | GGNCC | 1 cut(s) | 1876 |
| BmiI | GGNNCC | 6 cut(s) | 433, 990, 1819, 2077, 2099, 2592 |
| BmrFI | CCNGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| BmrI | ACTGGG | 2 cut(s) | 1763, 1901 |
| BmuI | ACTGGG | 2 cut(s) | 1763, 1901 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1155 |
| BpiI | GAAGAC | 2 cut(s) | 497, 1037 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 690, 722, 903, 935 |
| BpmI | CTGGAG | 6 cut(s) | 134, 418, 987, 1731, 1886, 2481 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1298, 2093, 2612 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2558 |
| BpuEI | CTTGAG | 2 cut(s) | 379, 2651 |
| BsaBI | GATNNNNATC | 1 cut(s) | 462 |
| BsaJI | CCNNGG | 6 cut(s) | 609, 1039, 1146, 1574, 1821, 1838 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1926, 1956 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1382, 1839, 2771 |
| Bse1I | ACTGG | 5 cut(s) | 954, 1769, 1907, 2315, 2741 |
| Bse21I | CCTNAGG | 1 cut(s) | 1311 |
| Bse3DI | GCAATG | 3 cut(s) | 201, 1219, 2544 |
| Bse8I | GATNNNNATC | 1 cut(s) | 462 |
| BseBI | CCWGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| BseDI | CCNNGG | 6 cut(s) | 609, 1039, 1146, 1574, 1821, 1838 |
| BseJI | GATNNNNATC | 1 cut(s) | 462 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1382, 1839, 2771 |
| BseMI | GCAATG | 3 cut(s) | 201, 1219, 2544 |
| BseNI | ACTGG | 5 cut(s) | 954, 1769, 1907, 2315, 2741 |
| BseRI | GAGGAG | 3 cut(s) | 120, 695, 1047 |
| BseXI | GCAGC | 6 cut(s) | 287, 538, 619, 1438, 2251, 2558 |
| BsgI | GTGCAG | 2 cut(s) | 447, 2546 |
| Bsh1236I | CGCG | 1 cut(s) | 322 |
| BshFI | GGCC | 3 cut(s) | 748, 1185, 1579 |
| BshNI | GGYRCC | 3 cut(s) | 1817, 2075, 2590 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2094 |
| BslFI | GGGAC | 2 cut(s) | 1241, 2520 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1382, 1839, 2771 |
| BsmAI | GTCTC | 5 cut(s) | 192, 385, 1862, 2291, 2433 |
| BsmFI | GGGAC | 2 cut(s) | 1241, 2520 |
| BsnI | GGCC | 3 cut(s) | 748, 1185, 1579 |
| Bsp1286I | GDGCHC | 2 cut(s) | 993, 2094 |
| Bsp1407I | TGTACA | 2 cut(s) | 1624, 2128 |
| Bsp143I | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2558 |
| BspACI | CCGC | 6 cut(s) | 5, 14, 118, 742, 1109, 1594 |
| BspANI | GGCC | 3 cut(s) | 748, 1185, 1579 |
| BspFNI | CGCG | 1 cut(s) | 322 |
| BspHI | TCATGA | 4 cut(s) | 208, 1495, 2800, 2820 |
| BspLI | GGNNCC | 6 cut(s) | 433, 990, 1819, 2077, 2099, 2592 |
| BspMAI | CTGCAG | 3 cut(s) | 249, 637, 816 |
| BspPI | GGATC | 2 cut(s) | 677, 2366 |
| BspQI | GCTCTTC | 1 cut(s) | 2819 |
| BspT107I | GGYRCC | 3 cut(s) | 1817, 2075, 2590 |
| BsrBI | CCGCTC | 1 cut(s) | 118 |
| BsrDI | GCAATG | 3 cut(s) | 201, 1219, 2544 |
| BsrGI | TGTACA | 2 cut(s) | 1624, 2128 |
| BsrI | ACTGG | 5 cut(s) | 954, 1769, 1907, 2315, 2741 |
| BssECI | CCNNGG | 6 cut(s) | 609, 1039, 1146, 1574, 1821, 1838 |
| BssMI | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| BssT1I | CCWWGG | 3 cut(s) | 1146, 1821, 1838 |
| Bst2UI | CCWGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| Bst4CI | ACNGT | 4 cut(s) | 215, 676, 1269, 2292 |
| Bst6I | CTCTTC | 3 cut(s) | 150, 2211, 2819 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 444 |
| BstAUI | TGTACA | 2 cut(s) | 1624, 2128 |
| BstC8I | GCNNGC | 7 cut(s) | 39, 249, 430, 445, 539, 746, 1113 |
| BstFNI | CGCG | 1 cut(s) | 322 |
| BstH2I | RGCGCY | 2 cut(s) | 2275, 2572 |
| BstHHI | GCGC | 5 cut(s) | 253, 322, 1593, 2274, 2571 |
| BstKTI | GATC | 5 cut(s) | 259, 672, 1537, 2374, 2806 |
| BstMAI | GTCTC | 5 cut(s) | 192, 385, 1862, 2291, 2433 |
| BstMBI | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 34, 444, 523, 941, 1121, 1336, 2568 |
| BstNI | CCWGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| BstNSI | RCATGY | 1 cut(s) | 447 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1155 |
| BstSCI | CCNGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| BstSFI | CTRYAG | 3 cut(s) | 245, 633, 812 |
| BstUI | CGCG | 1 cut(s) | 322 |
| BstV1I | GCAGC | 6 cut(s) | 287, 538, 619, 1438, 2251, 2558 |
| BstV2I | GAAGAC | 2 cut(s) | 497, 1037 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1193 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1311 |
| BsuRI | GGCC | 3 cut(s) | 748, 1185, 1579 |
| BtrI | CACGTC | 1 cut(s) | 563 |
| BtsI | GCAGTG | 1 cut(s) | 445 |
| BtsIMutI | CAGTG | 8 cut(s) | 220, 445, 672, 961, 1135, 1426, 1608, 2308 |
| Cac8I | GCNNGC | 7 cut(s) | 39, 249, 430, 445, 539, 746, 1113 |
| CciI | TCATGA | 4 cut(s) | 208, 1495, 2800, 2820 |
| CfoI | GCGC | 5 cut(s) | 253, 322, 1593, 2274, 2571 |
| Cfr13I | GGNCC | 1 cut(s) | 1876 |
| CseI | GACGC | 1 cut(s) | 1145 |
| DpnI | GATC | 5 cut(s) | 258, 671, 1536, 2373, 2805 |
| DpnII | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| DraI | TTTAAA | 1 cut(s) | 1089 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2670 |
| EaeI | YGGCCR | 1 cut(s) | 1183 |
| Eam1104I | CTCTTC | 3 cut(s) | 150, 2211, 2819 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2670 |
| EarI | CTCTTC | 3 cut(s) | 150, 2211, 2819 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 2092 |
| Eco130I | CCWWGG | 3 cut(s) | 1146, 1821, 1838 |
| Eco147I | AGGCCT | 1 cut(s) | 748 |
| Eco24I | GRGCYC | 2 cut(s) | 993, 2094 |
| Eco47I | GGWCC | 1 cut(s) | 1876 |
| Eco47III | AGCGCT | 1 cut(s) | 2570 |
| Eco53kI | GAGCTC | 1 cut(s) | 2092 |
| Eco57I | CTGAAG | 4 cut(s) | 174, 957, 2193, 2252 |
| Eco81I | CCTNAGG | 1 cut(s) | 1311 |
| EcoICRI | GAGCTC | 1 cut(s) | 2092 |
| EcoRII | CCWGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| EcoT14I | CCWWGG | 3 cut(s) | 1146, 1821, 1838 |
| EcoT22I | ATGCAT | 2 cut(s) | 151, 2519 |
| EcoT38I | GRGCYC | 2 cut(s) | 993, 2094 |
| ErhI | CCWWGG | 3 cut(s) | 1146, 1821, 1838 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 210, 242 |
| FaqI | GGGAC | 2 cut(s) | 1241, 2520 |
| FauNDI | CATATG | 1 cut(s) | 1332 |
| FbaI | TGATCA | 2 cut(s) | 256, 2803 |
| FblI | GTMKAC | 1 cut(s) | 1142 |
| Fnu4HI | GCNGC | 8 cut(s) | 301, 527, 633, 1109, 1452, 1594, 2240, 2572 |
| FriOI | GRGCYC | 2 cut(s) | 993, 2094 |
| Fsp4HI | GCNGC | 8 cut(s) | 301, 527, 633, 1109, 1452, 1594, 2240, 2572 |
| FspBI | CTAG | 6 cut(s) | 485, 542, 2102, 2405, 2768, 2811 |
| GlaI | GCGC | 5 cut(s) | 252, 321, 1592, 2273, 2570 |
| GluI | GCNGC | 8 cut(s) | 301, 527, 633, 1109, 1452, 1594, 2240, 2572 |
| GsuI | CTGGAG | 6 cut(s) | 134, 418, 987, 1731, 1886, 2481 |
| HaeII | RGCGCY | 2 cut(s) | 2275, 2572 |
| HaeIII | GGCC | 3 cut(s) | 748, 1185, 1579 |
| HgaI | GACGC | 1 cut(s) | 1145 |
| HhaI | GCGC | 5 cut(s) | 253, 322, 1593, 2274, 2571 |
| Hin6I | GCGC | 5 cut(s) | 251, 320, 1591, 2272, 2569 |
| HinP1I | GCGC | 5 cut(s) | 251, 320, 1591, 2272, 2569 |
| HincII | GTYRAC | 1 cut(s) | 1783 |
| HindII | GTYRAC | 1 cut(s) | 1783 |
| HindIII | AAGCTT | 1 cut(s) | 35 |
| HinfI | GANTC | 9 cut(s) | 363, 393, 762, 912, 962, 1007, 1444, 2314, 2665 |
| HphI | GGTGA | 4 cut(s) | 482, 1510, 1837, 2722 |
| Hpy166II | GTNNAC | 6 cut(s) | 385, 1143, 1424, 1783, 2410, 2675 |
| Hpy8I | GTNNAC | 6 cut(s) | 385, 1143, 1424, 1783, 2410, 2675 |
| Hpy99I | CGWCG | 3 cut(s) | 1161, 1373, 2498 |
| HpyCH4III | ACNGT | 4 cut(s) | 215, 676, 1269, 2292 |
| HpyCH4IV | ACGT | 4 cut(s) | 562, 1936, 2195, 2671 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 34, 444, 523, 941, 1121, 1336, 2568 |
| HpySE526I | ACGT | 4 cut(s) | 562, 1936, 2195, 2671 |
| HspAI | GCGC | 5 cut(s) | 251, 320, 1591, 2272, 2569 |
| KpnI | GGTACC | 1 cut(s) | 1821 |
| Ksp22I | TGATCA | 2 cut(s) | 256, 2803 |
| Kzo9I | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| LguI | GCTCTTC | 1 cut(s) | 2819 |
| LmnI | GCTCC | 5 cut(s) | 115, 437, 988, 1196, 2534 |
| Lsp1109I | GCAGC | 6 cut(s) | 287, 538, 619, 1438, 2251, 2558 |
| MaeI | CTAG | 6 cut(s) | 485, 542, 2102, 2405, 2768, 2811 |
| MaeII | ACGT | 4 cut(s) | 562, 1936, 2195, 2671 |
| MaeIII | GTNAC | 3 cut(s) | 398, 676, 1894 |
| MalI | GATC | 5 cut(s) | 258, 671, 1536, 2373, 2805 |
| MbiI | CCGCTC | 1 cut(s) | 118 |
| MboI | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| MfeI | CAATTG | 2 cut(s) | 1116, 2169 |
| MhlI | GDGCHC | 2 cut(s) | 993, 2094 |
| MlsI | TGGCCA | 1 cut(s) | 1185 |
| MluNI | TGGCCA | 1 cut(s) | 1185 |
| MlyI | GAGTC | 4 cut(s) | 387, 921, 1016, 2659 |
| MmeI | TCCRAC | 3 cut(s) | 1139, 2274, 2828 |
| Mox20I | TGGCCA | 1 cut(s) | 1185 |
| Mph1103I | ATGCAT | 2 cut(s) | 151, 2519 |
| MroXI | GAANNNNTTC | 5 cut(s) | 222, 334, 650, 1034, 2793 |
| MscI | TGGCCA | 1 cut(s) | 1185 |
| MslI | CAYNNNNRTG | 5 cut(s) | 213, 258, 468, 858, 2522 |
| Msp20I | TGGCCA | 1 cut(s) | 1185 |
| MspA1I | CMGCKG | 1 cut(s) | 529 |
| MspR9I | CCNGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| MunI | CAATTG | 2 cut(s) | 1116, 2169 |
| MvaI | CCWGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| MvnI | CGCG | 1 cut(s) | 322 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 34, 444, 523, 941, 1121, 1336, 2568 |
| NdeI | CATATG | 1 cut(s) | 1332 |
| NdeII | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| NlaIV | GGNNCC | 6 cut(s) | 433, 990, 1819, 2077, 2099, 2592 |
| NmeAIII | GCCGAG | 2 cut(s) | 935, 1705 |
| NmuCI | GTSAC | 1 cut(s) | 398 |
| NsiI | ATGCAT | 2 cut(s) | 151, 2519 |
| NspI | RCATGY | 1 cut(s) | 447 |
| PaeI | GCATGC | 1 cut(s) | 447 |
| PagI | TCATGA | 4 cut(s) | 208, 1495, 2800, 2820 |
| PceI | AGGCCT | 1 cut(s) | 748 |
| PciSI | GCTCTTC | 1 cut(s) | 2819 |
| PdmI | GAANNNNTTC | 5 cut(s) | 222, 334, 650, 1034, 2793 |
| PfeI | GAWTC | 5 cut(s) | 363, 762, 962, 1444, 2314 |
| PflFI | GACNNNGTC | 1 cut(s) | 396 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1382 |
| PfoI | TCCNGGA | 1 cut(s) | 1708 |
| PkrI | GCNGC | 8 cut(s) | 302, 528, 634, 1110, 1453, 1595, 2241, 2573 |
| PleI | GAGTC | 4 cut(s) | 387, 920, 1015, 2659 |
| PpsI | GAGTC | 4 cut(s) | 387, 920, 1015, 2659 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1155 |
| PshBI | ATTAAT | 1 cut(s) | 2657 |
| Psp124BI | GAGCTC | 1 cut(s) | 2094 |
| Psp6I | CCWGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| PspGI | CCWGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| PspN4I | GGNNCC | 6 cut(s) | 433, 990, 1819, 2077, 2099, 2592 |
| PspPI | GGNCC | 1 cut(s) | 1876 |
| PstI | CTGCAG | 3 cut(s) | 249, 637, 816 |
| PsyI | GACNNNGTC | 1 cut(s) | 396 |
| PvuII | CAGCTG | 1 cut(s) | 529 |
| RseI | CAYNNNNRTG | 5 cut(s) | 213, 258, 468, 858, 2522 |
| SacI | GAGCTC | 1 cut(s) | 2094 |
| SapI | GCTCTTC | 1 cut(s) | 2819 |
| SatI | GCNGC | 8 cut(s) | 301, 527, 633, 1109, 1452, 1594, 2240, 2572 |
| Sau3AI | GATC | 5 cut(s) | 256, 669, 1534, 2371, 2803 |
| Sau96I | GGNCC | 1 cut(s) | 1876 |
| ScaI | AGTACT | 1 cut(s) | 1242 |
| SchI | GAGTC | 4 cut(s) | 387, 921, 1016, 2659 |
| ScrFI | CCNGG | 7 cut(s) | 611, 1040, 1576, 1710, 1865, 1946, 2338 |
| SduI | GDGCHC | 2 cut(s) | 993, 2094 |
| SfcI | CTRYAG | 3 cut(s) | 245, 633, 812 |
| SinI | GGWCC | 1 cut(s) | 1876 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 213, 258, 468, 858, 2522 |
| SmlI | CTYRAG | 2 cut(s) | 358, 2630 |
| SmoI | CTYRAG | 2 cut(s) | 358, 2630 |
| SphI | GCATGC | 1 cut(s) | 447 |
| SseBI | AGGCCT | 1 cut(s) | 748 |
| SsiI | CCGC | 6 cut(s) | 5, 14, 118, 742, 1109, 1594 |
| SspI | AATATT | 2 cut(s) | 898, 2393 |
| SspMI | CTAG | 6 cut(s) | 485, 542, 2102, 2405, 2768, 2811 |
| SstI | GAGCTC | 1 cut(s) | 2094 |
| StuI | AGGCCT | 1 cut(s) | 748 |
| StyD4I | CCNGG | 7 cut(s) | 609, 1038, 1574, 1708, 1863, 1944, 2336 |
| StyI | CCWWGG | 3 cut(s) | 1146, 1821, 1838 |
| TaaI | ACNGT | 4 cut(s) | 215, 676, 1269, 2292 |
| TaiI | ACGT | 4 cut(s) | 565, 1939, 2198, 2674 |
| TaqI | TCGA | 9 cut(s) | 466, 928, 1345, 1371, 1507, 1926, 2415, 2493, 2640 |
| TaqII | GACCGA | 1 cut(s) | 672 |
| TatI | WGTACW | 5 cut(s) | 1076, 1240, 1624, 2128, 2407 |
| TauI | GCSGC | 2 cut(s) | 1111, 1596 |
| TfiI | GAWTC | 5 cut(s) | 363, 762, 962, 1444, 2314 |
| TscAI | CASTG | 8 cut(s) | 220, 445, 679, 961, 1135, 1426, 1608, 2315 |
| TseFI | GTSAC | 1 cut(s) | 398 |
| TseI | GCWGC | 6 cut(s) | 300, 526, 632, 1451, 2239, 2571 |
| Tsp45I | GTSAC | 1 cut(s) | 398 |
| TspDTI | ATGAA | 9 cut(s) | 246, 710, 788, 1484, 1834, 1974, 2041, 2154, 2837 |
| TspGWI | ACGGA | 2 cut(s) | 386, 1989 |
| TspRI | CASTG | 8 cut(s) | 220, 445, 679, 961, 1135, 1426, 1608, 2315 |
| Tth111I | GACNNNGTC | 1 cut(s) | 396 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1382 |
| VpaK11BI | GGWCC | 1 cut(s) | 1876 |
| VspI | ATTAAT | 1 cut(s) | 2657 |
| XapI | RAATTY | 4 cut(s) | 233, 404, 1961, 2498 |
| XbaI | TCTAGA | 2 cut(s) | 484, 2767 |
| XceI | RCATGY | 1 cut(s) | 447 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 526 |
| XmiI | GTMKAC | 1 cut(s) | 1142 |
| XmnI | GAANNNNTTC | 5 cut(s) | 222, 334, 650, 1034, 2793 |
| XspI | CTAG | 6 cut(s) | 485, 542, 2102, 2405, 2768, 2811 |
| ZrmI | AGTACT | 1 cut(s) | 1242 |
| Zsp2I | ATGCAT | 2 cut(s) | 151, 2519 |