Rw7G022840

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27235271 .. 27238144
2874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G022840.1

Sequence Viewer

Length: 2778 bp
ATGGCAGAGAGTTCAGTTAATCTTCTGCTAGAGAAACTTGGAGGCATTTTCAAAAATGAGGTACACCTGTTGGGTGTATTGTTAGGAGGGGTTCAAGAAGAAGCGATCAATCTTCAAGGCGAGCTTGAAAGAATGAGGGCCTTCCTGAGGACTGCAGATGCATTGCAGGAAACCGATCAGGAAGTCAAAGTTTGGGTTAAGCAAGTCAGAGATATTGCTCATGAAGCTGAAGATATTCTAGATGAATTTACTTTGCTCCACGAACATGATCATGGGGATGGAATCTGTGGTTCTCTGAGTAGATTGAGTTGCTGTATCAAGAATGCAAAAGCTTGTTATCGTATTGCTTGCCAGTTAAAAGCCATCAACTCAAGAGTCAAAAGTATTTCAGAGGTTCGTAAGAGACTCCAACACAAATTCATCAAAGCCGAAGAAGGTCTGGGATTTGACAGTGTTGAAAATACATGGCAAGACCGTCGAGGAGATGCGCTTCTTCTAGACAAATCTGATCTTGTGGGCATTCATGAGCCTAAAAATCAGCTTGTGGGGTGGCTGTTTAAAGACAATTCTGGGCGCAAAGTAGTTTCCTTGGCTGGAATGGGAGGGATAGGGAAGACCACCTTGGCAAAGCAAGTATATGATGATCCACAAGTGGAAAAGCATTTTGAGGTGCGTGCATGGGTCACTGTCAATCGATCCATCAAATCTGGAGACCTTCTCAAAGACATGGTTCAACAACTCTTCAAAGCAAGCAGGAGACGAGTTCCAGAAGTAATTGCAAACATGGACAACAATCAACTGAGGGCGACAATCAAGGAGCTGCTAAGGGAAAGAAGGTATCTGATTGTCTTGGATGATGTTTGGCATCTATATGAATGGGATACTATTCAACATGCACTGCCTAACAAAAGCTGTGGCAGCCGAGTTATGCTCACAACAAGAAATGCTGAAATAGCCTCTACTACTCGCACACTCTCTGATGAGTCTTGGGATCTATTTTGCAGAAAGGTGTTTCAACTGAACAAATGCCCTCCTCATTTGGAGGATATTTGTAAGGACATTTTAAAGAAGTGTGAGGGGCTTCCCCTTGCGATTGTCACAATTAGTAGTGTTTTGGCTACAAAAGATGAAAGACGAATGGACGAGTGGGATATGGTTGCCCGCAGCCTTGGGGCAGAAATTGAGGGTAATGACAAGCTCAAGTATTTGAAAAAGGTTCTGTTACTCAGCTTTAATGACTTGCCATACTTCCTCAAATCCTGCTTCTTGTACCTGAGCATCTTTCCTGAGGGTCATCTGATTGAACGAATGAGGCTAATCCGGTTATGGGTAGCAGAAGGGTTAATTGAAGCAAAAGAGGGGAGAACACCCGAAGAAGTGGCAGATGACTATCTCCATGAACTCTTGAATAGAAGCCTAATACAAGTGGTGAGAACTAGTTCTGATGGAAGGATCAGAACATGTCGGATCCATGAGTTTTTGCGGGAGATCATCATCTCCAAGTCAAGAGATCAGAACTTCACCACAGTTGTCAAAGAAAAGAGTGTTCCTGCGCAATGGTCTGATAAAATCCGACGCCTATCCATCCAGAGCACACTACAAACTGTGAAGCCAAACAGGTCAGTATCCCAATTACGCTCACTGTTCATGTTTGGGGTCGCTCAAAAGCTATCTATCCGTACATTATTTCCTAAAGGTTTCAGGCTGCTAAATGTCTTAGACTTGCATAGCTCACGCTTAAAGAAATTTCCAGTTGAAGTTGTGGACTTGTACTTCTTGAAATACTTGAGCTTGAGCGAAACCAAGGTGAAAAATGTGCCGAGATTCATTGGGAAGCTTCAGAATCTAGAAACTCTAGATCTTAAGCATTCCTATGTCCGTGAACTCCCTGATGAGATCCTCAAGCTTCAACGCCTACGCCATCTTCTGGTGTATCAATATCAGTTTAGATCCAATGAATACTTTGATGCAAAGAATGGTTTTAAGGTCACACCAAAAATAGGAGGTTTACGAGCATTGCAGAAGCTCTGTTTCATAGAGGCAAACCAAGATGGTGGCACTATAATAAGAGAACTTGGGAAGCTAAATCAGCTGAGAAGGTTAGGCCTTATAAAATTGAGAAAAGTGGATGGGAAGGCTCTATCTTCATCCATTGCAAAGCTGAGTAATCTTCGTGCGCTGTCTATAACTTCAGTGGAAGCAGATGAGATCATTGATCTTCAACACCTTTCTTCTCCTCCCTTGTTGCTTCAGCGGCTGTACCTGAACGGACGTTTGGAAGCATTACCTGACTGGATTCCTTCTCTTCCAAACCTAGTCAGATTGTCTCTGAGATGGAGTAGGCTAAGGGATGATCCACTCATCTATCTACGACATATTCCCAATCTTGTTCAACTTGAACTATGTCAAGCATTTATCGGAGACAGATTGTGTTTTAAGGCTGATGGGTTTATGAAGCTGAAGATTCTAAGCCTGGACAAATTCGATGAACTTAGGTGCATAGATGTGGAGATGGGTGCAATGGATTGTCTTGAAAAGCTAAGCATCCAACGGTGTGAGCTTTTGGAGAATGTGCCATCAGGGATTGAGCATCTCCGTAAGTTGAAAGTTCTCGAGTTATCTGAAATGCCAGTGGATTTGATGAAGACAATCCGTCCAGATGGAAAAGATAATTGGAGAGTCTCGCATGTTCCTGAAGTTTCTTCGACATACTGGAGAGAAGGGGAATGCAATATCTTCAGCCACGAACTCCAAATCCGATGGAAATCTTGGAAGTAA

Protein Analysis

925

Amino Acids

106.58

Weight (kDa)

9.02

Isoelectric Point (pI)

39.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 91 2e-22 Rx N-terminal domain
NB-ARC PF00931 176 - 341 1.1e-41 NB-ARC domain
WHD_DRP PF23559 427 - 498 9.9e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 544 - 871 3.4e-45 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2111
Acc16I TGCGCA 1 cut(s) 1554
AccB7I CCANNNNNTGG 1 cut(s) 1927
AciI CCGC 3 cut(s) 1162, 1483, 2254
AclWI GGATC 9 cut(s) 638, 690, 999, 1460, 1462, 1475, 1891, 1944, 2348
AcsI RAATTY 4 cut(s) 245, 416, 1745, 2480
AcuI CTGAAG 7 cut(s) 249, 1823, 2175, 2234, 2480, 2715, 2722
AcyI GRCGYC 1 cut(s) 1576
AfaI GTAC 5 cut(s) 63, 1271, 1681, 1772, 2261
AfiI CCNNNNNNNGG 4 cut(s) 147, 1327, 1927, 2000
AflII CTTAAG 1 cut(s) 1862
AflIII ACRYGT 1 cut(s) 1460
AhdI GACNNNNNGTC 1 cut(s) 2652
AhlI ACTAGT 1 cut(s) 1436
AjnI CCWGG 1 cut(s) 2472
AjuI GAANNNNNNNTTGG 6 cut(s) 605, 637, 2258, 2290, 2656, 2688
AloI GAACNNNNNNTCC 2 cut(s) 2739, 2771
Alw21I GWGCWC 1 cut(s) 1595
Alw26I GTCTC 6 cut(s) 397, 705, 751, 2331, 2415, 2686
AlwI GGATC 9 cut(s) 638, 690, 999, 1460, 1462, 1475, 1891, 1944, 2348
AlwNI CAGNNNCTG 1 cut(s) 2257
Ama87I CYCGRG 1 cut(s) 2612
AoxI GGCC 2 cut(s) 138, 2104
ApeKI GCWGC 4 cut(s) 820, 918, 1164, 1705
ApoI RAATTY 4 cut(s) 245, 416, 1745, 2480
Asp700I GAANNNNTTC 2 cut(s) 234, 1438
AspLEI GCGC 4 cut(s) 490, 576, 1555, 2179
AspS9I GGNCC 1 cut(s) 138
AsuHPI GGTGA 3 cut(s) 1441, 1513, 1819
AvaI CYCGRG 1 cut(s) 2612
AxyI CCTNAGG 2 cut(s) 146, 1287
BaeI ACNNNNGTAYC 2 cut(s) 53, 86
BamHI GGATCC 1 cut(s) 1467
BbsI GAAGAC 2 cut(s) 620, 2651
Bbv12I GWGCWC 1 cut(s) 1595
BbvI GCAGC 4 cut(s) 807, 930, 1176, 1692
BcgI CGANNNNNNTGC 2 cut(s) 458, 492
BciT130I CCWGG 1 cut(s) 2474
BciVI GTATCC 2 cut(s) 874, 1636
BclI TGATCA 1 cut(s) 268
BcoDI GTCTC 6 cut(s) 397, 705, 751, 2331, 2415, 2686
BcuI ACTAGT 1 cut(s) 1436
BfaI CTAG 7 cut(s) 29, 239, 497, 1437, 1847, 1856, 2315
BfmI CTRYAG 1 cut(s) 153
BfrI CTTAAG 1 cut(s) 1862
BfuI GTATCC 2 cut(s) 874, 1636
BglII AGATCT 1 cut(s) 1858
BisI GCNGC 5 cut(s) 821, 919, 1165, 1706, 2255
BlpI GCTNAGC 1 cut(s) 2540
BlsI GCNGC 5 cut(s) 822, 920, 1166, 1707, 2256
Bme1390I CCNGG 1 cut(s) 2474
BmeRI GACNNNNNGTC 1 cut(s) 2652
BmeT110I CYCGRG 1 cut(s) 2612
BmgT120I GGNCC 1 cut(s) 138
BmiI GGNNCC 1 cut(s) 1469
BmrFI CCNGG 1 cut(s) 2474
BmsI GCATC 7 cut(s) 148, 475, 874, 1287, 1957, 2553, 2599
BpiI GAAGAC 2 cut(s) 620, 2651
BplI GAGNNNNNCTC 4 cut(s) 702, 734, 915, 947
BpmI CTGGAG 2 cut(s) 729, 2734
Bpu10I CCTNAGC 3 cut(s) 824, 1274, 2345
Bpu1102I GCTNAGC 1 cut(s) 2540
BpuEI CTTGAG 5 cut(s) 355, 1184, 1807, 1813, 1886
Bsa29I ATCGAT 1 cut(s) 694
BsaBI GATNNNNATC 3 cut(s) 1389, 1493, 2764
BsaHI GRCGYC 1 cut(s) 1576
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 4 cut(s) 588, 621, 1168, 1803
BsaWI WCCGGW 1 cut(s) 1320
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 1327, 1927, 2000
Bse1I ACTGG 5 cut(s) 352, 1751, 2297, 2630, 2717
Bse21I CCTNAGG 2 cut(s) 146, 1287
Bse3DI GCAATG 5 cut(s) 161, 1562, 2015, 2151, 2526
Bse8I GATNNNNATC 3 cut(s) 1389, 1493, 2764
BseBI CCWGG 1 cut(s) 2474
BseCI ATCGAT 1 cut(s) 694
BseDI CCNNGG 4 cut(s) 588, 621, 1168, 1803
BseGI GGATG 7 cut(s) 283, 859, 1584, 2134, 2147, 2356, 2544
BseJI GATNNNNATC 3 cut(s) 1389, 1493, 2764
BseLI CCNNNNNNNGG 4 cut(s) 147, 1327, 1927, 2000
BseMI GCAATG 5 cut(s) 161, 1562, 2015, 2151, 2526
BseMII CTCAG 9 cut(s) 137, 287, 791, 1240, 1265, 1278, 2084, 2153, 2321
BseNI ACTGG 5 cut(s) 352, 1751, 2297, 2630, 2717
BseRI GAGGAG 3 cut(s) 495, 1023, 2226
BseXI GCAGC 4 cut(s) 807, 930, 1176, 1692
BshFI GGCC 2 cut(s) 140, 2106
BshVI ATCGAT 1 cut(s) 694
BsiHKAI GWGCWC 1 cut(s) 1595
BsiHKCI CYCGRG 1 cut(s) 2612
BsiSI CCGG 1 cut(s) 1321
BslI CCNNNNNNNGG 4 cut(s) 147, 1327, 1927, 2000
BsmAI GTCTC 6 cut(s) 397, 705, 751, 2331, 2415, 2686
BsmBI CGTCTC 1 cut(s) 751
BsmI GAATGC 4 cut(s) 328, 519, 1867, 2732
BsnI GGCC 2 cut(s) 140, 2106
Bso31I GGTCTC 1 cut(s) 705
BsoBI CYCGRG 1 cut(s) 2612
Bsp1286I GDGCHC 1 cut(s) 1595
Bsp1720I GCTNAGC 1 cut(s) 2540
BspACI CCGC 3 cut(s) 1162, 1483, 2254
BspANI GGCC 2 cut(s) 140, 2106
BspCNI CTCAG 9 cut(s) 138, 288, 792, 1239, 1266, 1279, 2085, 2154, 2322
BspDI ATCGAT 1 cut(s) 694
BspHI TCATGA 2 cut(s) 220, 523
BspLI GGNNCC 1 cut(s) 1469
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 9 cut(s) 638, 690, 999, 1460, 1462, 1475, 1891, 1944, 2348
BspTI CTTAAG 1 cut(s) 1862
BspTNI GGTCTC 1 cut(s) 705
BsrDI GCAATG 5 cut(s) 161, 1562, 2015, 2151, 2526
BsrI ACTGG 5 cut(s) 352, 1751, 2297, 2630, 2717
BssECI CCNNGG 4 cut(s) 588, 621, 1168, 1803
BssNI GRCGYC 1 cut(s) 1576
BssT1I CCWWGG 4 cut(s) 588, 621, 1168, 1803
Bst2UI CCWGG 1 cut(s) 2474
Bst4CI ACNGT 7 cut(s) 452, 476, 688, 1528, 1606, 1644, 2553
Bst6I CTCTTC 2 cut(s) 746, 2310
BstACI GRCGYC 1 cut(s) 1576
BstAFI CTTAAG 1 cut(s) 1862
BstC8I GCNNGC 5 cut(s) 122, 349, 675, 751, 1162
BstENI CCTNNNNNAGG 1 cut(s) 145
BstF5I GGATG 7 cut(s) 283, 859, 1584, 2134, 2147, 2356, 2544
BstHHI GCGC 4 cut(s) 490, 576, 1555, 2179
BstMAI GTCTC 6 cut(s) 397, 705, 751, 2331, 2415, 2686
BstMWI GCNNNNNNNGC 5 cut(s) 224, 918, 953, 2089, 2254
BstNI CCWGG 1 cut(s) 2474
BstNSI RCATGY 3 cut(s) 896, 1464, 2690
BstSCI CCNGG 1 cut(s) 2472
BstSFI CTRYAG 1 cut(s) 153
BstV1I GCAGC 4 cut(s) 807, 930, 1176, 1692
BstV2I GAAGAC 2 cut(s) 620, 2651
BstX2I RGATCY 5 cut(s) 991, 1467, 1858, 1896, 1949
BstXI CCANNNNNNTGG 1 cut(s) 2054
BstYI RGATCY 5 cut(s) 991, 1467, 1858, 1896, 1949
Bsu15I ATCGAT 1 cut(s) 694
Bsu36I CCTNAGG 2 cut(s) 146, 1287
BsuI GTATCC 2 cut(s) 874, 1636
BsuRI GGCC 2 cut(s) 140, 2106
BsuTUI ATCGAT 1 cut(s) 694
BtsCI GGATG 7 cut(s) 283, 859, 1584, 2134, 2147, 2356, 2544
BtsI GCAGTG 1 cut(s) 896
BtsIMutI CAGTG 6 cut(s) 457, 684, 896, 1640, 2199, 2637
Cac8I GCNNGC 5 cut(s) 122, 349, 675, 751, 1162
CaiI CAGNNNCTG 1 cut(s) 2257
CciI TCATGA 2 cut(s) 220, 523
CfoI GCGC 4 cut(s) 490, 576, 1555, 2179
Cfr13I GGNCC 1 cut(s) 138
ClaI ATCGAT 1 cut(s) 694
CseI GACGC 1 cut(s) 1584
Csp6I GTAC 5 cut(s) 62, 1270, 1680, 1771, 2260
CspCI CAANNNNNGTGG 2 cut(s) 895, 930
CviQI GTAC 5 cut(s) 62, 1270, 1680, 1771, 2260
DraI TTTAAA 2 cut(s) 559, 1065
DriI GACNNNNNGTC 1 cut(s) 2652
Eam1104I CTCTTC 2 cut(s) 746, 2310
Eam1105I GACNNNNNGTC 1 cut(s) 2652
EarI CTCTTC 2 cut(s) 746, 2310
Eco130I CCWWGG 4 cut(s) 588, 621, 1168, 1803
Eco147I AGGCCT 1 cut(s) 2106
Eco31I GGTCTC 1 cut(s) 705
Eco57I CTGAAG 7 cut(s) 249, 1823, 2175, 2234, 2480, 2715, 2722
Eco81I CCTNAGG 2 cut(s) 146, 1287
Eco88I CYCGRG 1 cut(s) 2612
EcoNI CCTNNNNNAGG 1 cut(s) 145
EcoO109I RGGNCCY 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 2472
EcoT14I CCWWGG 4 cut(s) 588, 621, 1168, 1803
EcoT22I ATGCAT 1 cut(s) 163
ErhI CCWWGG 4 cut(s) 588, 621, 1168, 1803
Esp3I CGTCTC 1 cut(s) 751
FalI AAGNNNNNCTT 4 cut(s) 108, 140, 605, 637
FauI CCCGC 2 cut(s) 1169, 1476
FbaI TGATCA 1 cut(s) 268
Fnu4HI GCNGC 5 cut(s) 821, 919, 1165, 1706, 2255
FokI GGATG 7 cut(s) 290, 866, 1571, 2134, 2141, 2363, 2531
Fsp4HI GCNGC 5 cut(s) 821, 919, 1165, 1706, 2255
FspBI CTAG 7 cut(s) 29, 239, 497, 1437, 1847, 1856, 2315
FspI TGCGCA 1 cut(s) 1554
GlaI GCGC 4 cut(s) 489, 575, 1554, 2178
GluI GCNGC 5 cut(s) 821, 919, 1165, 1706, 2255
GsuI CTGGAG 2 cut(s) 729, 2734
HaeIII GGCC 2 cut(s) 140, 2106
HapII CCGG 1 cut(s) 1321
HgaI GACGC 1 cut(s) 1584
HhaI GCGC 4 cut(s) 490, 576, 1555, 2179
Hin1I GRCGYC 1 cut(s) 1576
Hin6I GCGC 4 cut(s) 488, 574, 1553, 2177
HinP1I GCGC 4 cut(s) 488, 574, 1553, 2177
HindIII AAGCTT 3 cut(s) 330, 1835, 1904
HinfI GANTC 9 cut(s) 282, 375, 405, 983, 1824, 1843, 2296, 2464, 2679
HpaII CCGG 1 cut(s) 1321
HphI GGTGA 3 cut(s) 1441, 1513, 1819
Hpy166II GTNNAC 4 cut(s) 64, 1765, 1883, 2009
Hpy8I GTNNAC 4 cut(s) 64, 1765, 1883, 2009
Hpy99I CGWCG 2 cut(s) 480, 1578
HpyCH4III ACNGT 7 cut(s) 452, 476, 688, 1528, 1606, 1644, 2553
HpyCH4IV ACGT 1 cut(s) 2272
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 918, 953, 2089, 2254
HpySE526I ACGT 1 cut(s) 2272
Hsp92I GRCGYC 1 cut(s) 1576
HspAI GCGC 4 cut(s) 488, 574, 1553, 2177
Ksp22I TGATCA 1 cut(s) 268
LmnI GCTCC 2 cut(s) 261, 817
Lsp1109I GCAGC 4 cut(s) 807, 930, 1176, 1692
LweI GCATC 7 cut(s) 148, 475, 874, 1287, 1957, 2553, 2599
MaeI CTAG 7 cut(s) 29, 239, 497, 1437, 1847, 1856, 2315
MaeII ACGT 1 cut(s) 2272
MaeIII GTNAC 4 cut(s) 682, 1096, 1221, 1987
MflI RGATCY 5 cut(s) 991, 1467, 1858, 1896, 1949
MhlI GDGCHC 1 cut(s) 1595
MlyI GAGTC 4 cut(s) 384, 399, 992, 2688
MmeI TCCRAC 4 cut(s) 433, 1445, 1597, 2572
Mph1103I ATGCAT 1 cut(s) 163
MroXI GAANNNNTTC 2 cut(s) 234, 1438
MslI CAYNNNNRTG 6 cut(s) 264, 270, 276, 870, 1872, 2504
MspA1I CMGCKG 2 cut(s) 2092, 2254
MspCI CTTAAG 1 cut(s) 1862
MspI CCGG 1 cut(s) 1321
MspR9I CCNGG 1 cut(s) 2474
Mva1269I GAATGC 4 cut(s) 328, 519, 1867, 2732
MvaI CCWGG 1 cut(s) 2474
MwoI GCNNNNNNNGC 5 cut(s) 224, 918, 953, 2089, 2254
NlaIV GGNNCC 1 cut(s) 1469
NmeAIII GCCGAG 2 cut(s) 947, 1845
NmuCI GTSAC 3 cut(s) 682, 1096, 1987
NsbI TGCGCA 1 cut(s) 1554
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 3 cut(s) 896, 1464, 2690
PaeR7I CTCGAG 1 cut(s) 2612
PagI TCATGA 2 cut(s) 220, 523
PceI AGGCCT 1 cut(s) 2106
PciI ACATGT 1 cut(s) 1460
PctI GAATGC 4 cut(s) 328, 519, 1867, 2732
PdmI GAANNNNTTC 2 cut(s) 234, 1438
PfeI GAWTC 5 cut(s) 282, 1824, 1843, 2296, 2464
PflMI CCANNNNNTGG 1 cut(s) 1927
PkrI GCNGC 5 cut(s) 822, 920, 1166, 1707, 2256
PleI GAGTC 4 cut(s) 383, 399, 991, 2687
PpsI GAGTC 4 cut(s) 383, 399, 991, 2687
PscI ACATGT 1 cut(s) 1460
PsiI TTATAA 1 cut(s) 2111
Psp6I CCWGG 1 cut(s) 2472
PspGI CCWGG 1 cut(s) 2472
PspN4I GGNNCC 1 cut(s) 1469
PspPI GGNCC 1 cut(s) 138
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 1 cut(s) 2257
PsuI RGATCY 5 cut(s) 991, 1467, 1858, 1896, 1949
PvuII CAGCTG 1 cut(s) 2092
RsaI GTAC 5 cut(s) 63, 1271, 1681, 1772, 2261
RsaNI GTAC 5 cut(s) 62, 1270, 1680, 1771, 2260
RseI CAYNNNNRTG 6 cut(s) 264, 270, 276, 870, 1872, 2504
SatI GCNGC 5 cut(s) 821, 919, 1165, 1706, 2255
Sau96I GGNCC 1 cut(s) 138
SchI GAGTC 4 cut(s) 384, 399, 992, 2688
ScrFI CCNGG 1 cut(s) 2474
SduI GDGCHC 1 cut(s) 1595
SfaNI GCATC 7 cut(s) 148, 475, 874, 1287, 1957, 2553, 2599
SfcI CTRYAG 1 cut(s) 153
Sfr274I CTCGAG 1 cut(s) 2612
SlaI CTCGAG 1 cut(s) 2612
SmiMI CAYNNNNRTG 6 cut(s) 264, 270, 276, 870, 1872, 2504
SmlI CTYRAG 7 cut(s) 370, 1199, 1786, 1792, 1862, 1901, 2612
SmoI CTYRAG 7 cut(s) 370, 1199, 1786, 1792, 1862, 1901, 2612
SpeI ACTAGT 1 cut(s) 1436
SseBI AGGCCT 1 cut(s) 2106
SsiI CCGC 3 cut(s) 1162, 1483, 2254
SspMI CTAG 7 cut(s) 29, 239, 497, 1437, 1847, 1856, 2315
StuI AGGCCT 1 cut(s) 2106
StyD4I CCNGG 1 cut(s) 2472
StyI CCWWGG 4 cut(s) 588, 621, 1168, 1803
TaaI ACNGT 7 cut(s) 452, 476, 688, 1528, 1606, 1644, 2553
TaiI ACGT 1 cut(s) 2275
TaqI TCGA 5 cut(s) 478, 694, 2484, 2613, 2705
TatI WGTACW 1 cut(s) 1770
TauI GCSGC 1 cut(s) 2257
TfiI GAWTC 5 cut(s) 282, 1824, 1843, 2296, 2464
TscAI CASTG 6 cut(s) 457, 691, 903, 1647, 2199, 2637
TseFI GTSAC 3 cut(s) 682, 1096, 1987
TseI GCWGC 4 cut(s) 820, 918, 1164, 1705
Tsp45I GTSAC 3 cut(s) 682, 1096, 1987
TspGWI ACGGA 5 cut(s) 1667, 1868, 2283, 2585, 2642
TspRI CASTG 6 cut(s) 457, 691, 903, 1647, 2199, 2637
Van91I CCANNNNNTGG 1 cut(s) 1927
Vha464I CTTAAG 1 cut(s) 1862
XagI CCTNNNNNAGG 1 cut(s) 145
XapI RAATTY 4 cut(s) 245, 416, 1745, 2480
XbaI TCTAGA 4 cut(s) 238, 496, 1846, 1855
XceI RCATGY 3 cut(s) 896, 1464, 2690
XhoI CTCGAG 1 cut(s) 2612
XmnI GAANNNNTTC 2 cut(s) 234, 1438
XspI CTAG 7 cut(s) 29, 239, 497, 1437, 1847, 1856, 2315
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.