Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000888

Physical Location & Seq

Genomic Coordinates Forward (+)

40048533 .. 40052670

Gene Structure 4138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00246780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGTTGGCCGCAGCCTTGGGGCAGAAATTGAGGGTAATGACAAGCTCAACTATTTGAAAAAGGTTCTTTCACTCAGTTTTAATGATTTGCCTTACTTCCTCAAATCGTGCTTCTTATACCTGAGCATCTTCCCTGAGGGCCATCTGATTGAACGCATGAGGCTAATCCGCTTATGGGTAGCAGAGGGATTCATTGAAGCTAAAGAGGGGAGAACACTGGAAGAAGTAGCAGATGACTATCTCCATGAACTCTTGAACAGAAGCCTAATGCAAGTGGCCACAACTACTCCTGATGGAAGGGTCAAAACATGTCGGATCCATGACCTTTTGCGGGAGATCATCATCGCCAAGTCAAGAGATCAAAACTTCACCACAATCGTGAAAGAAAAAAGTGTGCCTGCGCAATGGTCTGATAAAATTCGACGCCTATCTATACATAACAGGCTACAATCTGTGCAGCCAAACAGGTCAGTTTCCCAATTACGTTCGTTATTCATGTTTGGGGCCAGTAGAAAGCCTTCCATCACTGCATTATTCCCCAGCGGTTTTAGGTTGCTAAATGTGTTAGACTTGCATAGCGCACCATTAAAAAGATTTCCAGTTGCAGTTGTGGACTTGTACTTCTTGAAATACCTGAGCTTGAGGGAAACCAAGGTGAAAACTGTTCCAAGATTCATTGGGAAGCTTCAGAATCTAGAAACTCTAGATCTTAAGCATTCCTATGTCAGTGAACTCCCTGATGAGATCCTCAAGCTTCAACGCCTACGCCATCTTCTGGCATATCAGCATGAATTTGTATCTTATGAACAGTTTAATTCAAAGAATGGATTTAAGGTTACCCCAAAAATAGGTGTCTTGCAAGCATTACAAAAGCTCTGTTTCATAGAGGTGAACCAAGATGGTGGTACAATTATAAGAGAGCTAGGGAAGCTAACTCAACTGCGGAGGTTAGGTCTTTTAAAATTGATAAAAGCAGATGGAAGGGCTCTATGTTCGTCCATTGCAAAGCTGAGTAATCTTCGTGCACTATCCATAGCTTCAATGAAAGAAGATGAGACCATTGATCTTCAACACCTTAATTCTCCTCCTTCGTTGCTCCAGCGGCTCTACATGAGAGGACGTTTGGACGTGTTACCCCACTGGATTCCTTCTCTTCCAAGCCTAGTGAGATTGTCCCTGAAATGGAGTAGGCTAAAGGATGATCCGCTCATCTCTCTACGACATATTCCCAATCTTGTTCAACTTGAATTATGTCAAGTATTTGTTGGAGAGAGATTGTGTTTCAAGGCTGATGGGTTTAGAAAGCTGAAGATTTTAAGCCTGGACAAATTCGATGAACTTAGGTGCATAGACGTGGAGATGGGTGCAATGGAATGTCTTGAAAAGCTAACCATCCAACGGTGTAAGAGTCTGGAGAATGTGCCATCAGGGATTGAGCATCTGCATAAGTTGAAAGTTCTCGAGTTTTCTGATATGCCAGTGGATTTGATGAAGACAATCCGTCCAGATGGAAAAGATAATTGGAGAGTCTCGCATGTCCCCGAAGTTTATTCAACATACTGGAGAGAAGGGGGATGGGAGGTGTATTCCATAGACAGCATGACTGATGGGGAGTACTGTCCCCTGCCCAGCAATCTCTTCAGCCACGAACTCCAAACAAGATGGAAATCATGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

559

Amino Acids

64.58

Weight (kDa)

9.31

Isoelectric Point (pI)

40.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	43 - 114	4.7e-25	Disease resistance protein Winged helix domain
LRR_14	PF23598	160 - 488	2e-46	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000888)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g22710 FvH4_5g23390 FvH4_5g23400 FvH4_5g23400 FvH4_5g23420
malus_domestica	MD06G1024500.v1.1 MD09G1164200.v1.1 MD09G1164500.v1.1 MD17G1163600.v1.1
prunus_persica	Prupe.5G025400_v2.0.a1 Prupe.5G025500_v2.0.a1 Prupe.5G025500_v2.0.a1 Prupe.5G025600_v2.0.a1
pyrus_communis	pycom06g01980 pycom09g08130 pycom17g15640
rosa_chinensis	RchiOBHm_Chr7g0211261 RchiOBHm_Chr7g0212451 RchiOBHm_Chr7g0212471 RchiOBHm_Chr7g0212481
rosa_laevigata	RLG00000018806
rosa_multiflora	Rmu_sc0005478.1_g000003 Rmu_sc0007576.1_g000003 Rmu_sc0007576.1_g000004 Rmu_sc0007576.1_g000011 Rmu_sc0007576.1_g000012 Rmu_sc0038076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246770 Rroxscaffold_3G00246780 Rroxscaffold_3G00246790 Rroxscaffold_3G00246810 Rroxscaffold_3G00247970
rosa_rugosa	Rorug02G0251500 Rorug07G0124700 Rorug07G0134000 Rorug07G0134100 Rorug07G0134200 Rorug07G0134300 Rorug07G0134400 Rorug07G0134500 Rorug07G0134500 Rorug07G0134700
rosa_samantha	Rh2AG309900 Rh2AG385400 Rh2BG318600 Rh2CG296800 Rh2CG301800 Rh7BG251100 Rh7BG260900 Rh7BG261000 Rh7CG273800 Rh7CG283800 Rh7CG283900 Rh7CG284100 Rh7DG264700 Rh7DG264800 Rh7DG273700 Rh7DG273800 Rh7DG273900
rosa_wichuraiana	Rw2G025080 Rw7G021970 Rw7G022810 Rw7G022820 Rw7G022840 Rw7G022850 Rw7G022870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	914
Acc16I	TGCGCA	1 cut(s)	402
AccB7I	CCANNNNNTGG	1 cut(s)	775
AccBSI	CCGCTC	1 cut(s)	1207
AciI	CCGC	7 cut(s)	10, 169, 331, 543, 943, 1102, 1205
AclWI	GGATC	4 cut(s)	310, 323, 739, 1196
AcoI	YGGCCR	2 cut(s)	7, 276
AcsI	RAATTY	3 cut(s)	417, 791, 1328
AcuI	CTGAAG	3 cut(s)	671, 1328, 1624
AcyI	GRCGYC	1 cut(s)	424
AfaI	GTAC	3 cut(s)	620, 907, 1616
AfiI	CCNNNNNNNGG	6 cut(s)	175, 331, 775, 848, 1182, 1398
AflII	CTTAAG	1 cut(s)	710
AflIII	ACRYGT	2 cut(s)	308, 1128
AhdI	GACNNNNNGTC	1 cut(s)	1500
AjiI	CACGTC	2 cut(s)	1129, 1354
AjnI	CCWGG	1 cut(s)	1320
AjuI	GAANNNNNNNTTGG	2 cut(s)	1504, 1536
AleI	CACNNNNGTG	1 cut(s)	377
Alw21I	GWGCWC	1 cut(s)	1027
Alw26I	GTCTC	2 cut(s)	1049, 1534
Alw44I	GTGCAC	1 cut(s)	1023
AlwI	GGATC	4 cut(s)	310, 323, 739, 1196
Ama87I	CYCGRG	1 cut(s)	1460
AoxI	GGCC	4 cut(s)	7, 139, 276, 504
ApaLI	GTGCAC	1 cut(s)	1023
ApeKI	GCWGC	2 cut(s)	12, 457
ApoI	RAATTY	3 cut(s)	417, 791, 1328
Asp700I	GAANNNNTTC	1 cut(s)	517
AspLEI	GCGC	2 cut(s)	403, 581
AspS9I	GGNCC	2 cut(s)	139, 504
AsuHPI	GGTGA	3 cut(s)	361, 667, 901
AvaI	CYCGRG	1 cut(s)	1460
AxyI	CCTNAGG	1 cut(s)	135
BaeGI	GKGCMC	1 cut(s)	1027
BalI	TGGCCA	1 cut(s)	278
BamHI	GGATCC	1 cut(s)	315
BanII	GRGCYC	1 cut(s)	988
BarI	GAAGNNNNNNTAC	2 cut(s)	502, 534
BbsI	GAAGAC	1 cut(s)	1499
Bbv12I	GWGCWC	1 cut(s)	1027
BbvI	GCAGC	2 cut(s)	24, 469
BciT130I	CCWGG	1 cut(s)	1322
BcoDI	GTCTC	2 cut(s)	1049, 1534
BfaI	CTAG	4 cut(s)	695, 704, 923, 1163
BfrI	CTTAAG	1 cut(s)	710
BglII	AGATCT	1 cut(s)	706
BisI	GCNGC	4 cut(s)	10, 13, 458, 1103
BlsI	GCNGC	4 cut(s)	11, 14, 459, 1104
BmcAI	AGTACT	1 cut(s)	1616
Bme1390I	CCNGG	1 cut(s)	1322
BmeRI	GACNNNNNGTC	1 cut(s)	1500
BmeT110I	CYCGRG	1 cut(s)	1460
BmgBI	CACGTC	2 cut(s)	1129, 1354
BmgT120I	GGNCC	2 cut(s)	139, 504
BmiI	GGNNCC	2 cut(s)	317, 505
BmrFI	CCNGG	1 cut(s)	1322
BmsI	GCATC	2 cut(s)	135, 1447
BpiI	GAAGAC	1 cut(s)	1499
BpmI	CTGGAG	3 cut(s)	1082, 1433, 1582
Bpu10I	CCTNAGC	2 cut(s)	122, 635
BpuEI	CTTGAG	2 cut(s)	661, 734
BsaBI	GATNNNNATC	3 cut(s)	237, 341, 1666
BsaHI	GRCGYC	1 cut(s)	424
BsaI	GGTCTC	1 cut(s)	1049
BsaJI	CCNNGG	2 cut(s)	16, 651
BsaXI	ACNNNNNCTCC	4 cut(s)	271, 301, 937, 967
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 331, 775, 848, 1182, 1398
Bse1I	ACTGG	6 cut(s)	222, 507, 599, 1145, 1478, 1565
Bse21I	CCTNAGG	1 cut(s)	135
Bse3DI	GCAATG	3 cut(s)	410, 999, 1374
Bse8I	GATNNNNATC	3 cut(s)	237, 341, 1666
BseBI	CCWGG	1 cut(s)	1322
BseDI	CCNNGG	2 cut(s)	16, 651
BseGI	GGATG	3 cut(s)	1204, 1392, 1580
BseJI	GATNNNNATC	3 cut(s)	237, 341, 1666
BseLI	CCNNNNNNNGG	6 cut(s)	175, 331, 775, 848, 1182, 1398
BseMI	GCAATG	3 cut(s)	410, 999, 1374
BseMII	CTCAG	5 cut(s)	88, 113, 126, 626, 1001
BseNI	ACTGG	6 cut(s)	222, 507, 599, 1145, 1478, 1565
BseRI	GAGGAG	1 cut(s)	1074
BseSI	GKGCMC	1 cut(s)	1027
BseXI	GCAGC	2 cut(s)	24, 469
BseYI	CCCAGC	2 cut(s)	539, 1628
BsgI	GTGCAG	1 cut(s)	476
BshFI	GGCC	4 cut(s)	9, 141, 278, 506
BsiHKAI	GWGCWC	1 cut(s)	1027
BsiHKCI	CYCGRG	1 cut(s)	1460
BslFI	GGGAC	3 cut(s)	1159, 1523, 1605
BslI	CCNNNNNNNGG	6 cut(s)	175, 331, 775, 848, 1182, 1398
BsmAI	GTCTC	2 cut(s)	1049, 1534
BsmFI	GGGAC	3 cut(s)	1159, 1523, 1605
BsmI	GAATGC	1 cut(s)	715
BsnI	GGCC	4 cut(s)	9, 141, 278, 506
Bso31I	GGTCTC	1 cut(s)	1049
BsoBI	CYCGRG	1 cut(s)	1460
Bsp1286I	GDGCHC	2 cut(s)	988, 1027
Bsp143I	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
BspACI	CCGC	7 cut(s)	10, 169, 331, 543, 943, 1102, 1205
BspANI	GGCC	4 cut(s)	9, 141, 278, 506
BspCNI	CTCAG	5 cut(s)	87, 114, 127, 627, 1002
BspLI	GGNNCC	2 cut(s)	317, 505
BspPI	GGATC	4 cut(s)	310, 323, 739, 1196
BspTI	CTTAAG	1 cut(s)	710
BspTNI	GGTCTC	1 cut(s)	1049
BsrBI	CCGCTC	1 cut(s)	1207
BsrDI	GCAATG	3 cut(s)	410, 999, 1374
BsrI	ACTGG	6 cut(s)	222, 507, 599, 1145, 1478, 1565
BssECI	CCNNGG	2 cut(s)	16, 651
BssMI	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
BssNI	GRCGYC	1 cut(s)	424
BssT1I	CCWWGG	2 cut(s)	16, 651
Bst2UI	CCWGG	1 cut(s)	1322
Bst4CI	ACNGT	4 cut(s)	664, 810, 1401, 1619
Bst6I	CTCTTC	2 cut(s)	1158, 1643
BstACI	GRCGYC	1 cut(s)	424
BstAFI	CTTAAG	1 cut(s)	710
BstC8I	GCNNGC	2 cut(s)	399, 861
BstDEI	CTNAG	6 cut(s)	74, 122, 135, 635, 1010, 1340
BstEII	GGTNACC	1 cut(s)	835
BstF5I	GGATG	3 cut(s)	1204, 1392, 1580
BstHHI	GCGC	2 cut(s)	403, 581
BstKTI	GATC	7 cut(s)	318, 339, 361, 709, 747, 1066, 1204
BstMAI	GTCTC	2 cut(s)	1049, 1534
BstMBI	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
BstMWI	GCNNNNNNNGC	2 cut(s)	928, 1102
BstNI	CCWGG	1 cut(s)	1322
BstNSI	RCATGY	2 cut(s)	312, 1538
BstPI	GGTNACC	1 cut(s)	835
BstSCI	CCNGG	1 cut(s)	1320
BstSLI	GKGCMC	1 cut(s)	1027
BstV1I	GCAGC	2 cut(s)	24, 469
BstV2I	GAAGAC	1 cut(s)	1499
BstX2I	RGATCY	3 cut(s)	315, 706, 744
BstXI	CCANNNNNNTGG	1 cut(s)	902
BstYI	RGATCY	3 cut(s)	315, 706, 744
Bsu36I	CCTNAGG	1 cut(s)	135
BsuRI	GGCC	4 cut(s)	9, 141, 278, 506
BtgZI	GCGATG	1 cut(s)	328
BtrI	CACGTC	2 cut(s)	1129, 1354
BtsCI	GGATG	3 cut(s)	1204, 1392, 1580
BtsI	GCAGTG	1 cut(s)	525
BtsIMutI	CAGTG	5 cut(s)	215, 525, 733, 1138, 1485
Cac8I	GCNNGC	2 cut(s)	399, 861
CfoI	GCGC	2 cut(s)	403, 581
Cfr13I	GGNCC	2 cut(s)	139, 504
CseI	GACGC	1 cut(s)	432
Csp6I	GTAC	3 cut(s)	619, 906, 1615
CviQI	GTAC	3 cut(s)	619, 906, 1615
DdeI	CTNAG	6 cut(s)	74, 122, 135, 635, 1010, 1340
DpnI	GATC	7 cut(s)	317, 338, 360, 708, 746, 1065, 1203
DpnII	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
DraI	TTTAAA	1 cut(s)	960
DriI	GACNNNNNGTC	1 cut(s)	1500
EaeI	YGGCCR	2 cut(s)	7, 276
Eam1104I	CTCTTC	2 cut(s)	1158, 1643
Eam1105I	GACNNNNNGTC	1 cut(s)	1500
EarI	CTCTTC	2 cut(s)	1158, 1643
Eco130I	CCWWGG	2 cut(s)	16, 651
Eco24I	GRGCYC	1 cut(s)	988
Eco31I	GGTCTC	1 cut(s)	1049
Eco57I	CTGAAG	3 cut(s)	671, 1328, 1624
Eco81I	CCTNAGG	1 cut(s)	135
Eco88I	CYCGRG	1 cut(s)	1460
Eco91I	GGTNACC	1 cut(s)	835
EcoO65I	GGTNACC	1 cut(s)	835
EcoRII	CCWGG	1 cut(s)	1320
EcoT14I	CCWWGG	2 cut(s)	16, 651
EcoT38I	GRGCYC	1 cut(s)	988
ErhI	CCWWGG	2 cut(s)	16, 651
FaqI	GGGAC	3 cut(s)	1159, 1523, 1605
FauI	CCCGC	1 cut(s)	324
Fnu4HI	GCNGC	4 cut(s)	10, 13, 458, 1103
FokI	GGATG	3 cut(s)	1211, 1379, 1587
FriOI	GRGCYC	1 cut(s)	988
Fsp4HI	GCNGC	4 cut(s)	10, 13, 458, 1103
FspBI	CTAG	4 cut(s)	695, 704, 923, 1163
FspI	TGCGCA	1 cut(s)	402
GlaI	GCGC	2 cut(s)	402, 580
GluI	GCNGC	4 cut(s)	10, 13, 458, 1103
GsaI	CCCAGC	2 cut(s)	543, 1632
GsuI	CTGGAG	3 cut(s)	1082, 1433, 1582
HaeIII	GGCC	4 cut(s)	9, 141, 278, 506
HgaI	GACGC	1 cut(s)	432
HhaI	GCGC	2 cut(s)	403, 581
Hin1I	GRCGYC	1 cut(s)	424
Hin6I	GCGC	2 cut(s)	401, 579
HinP1I	GCGC	2 cut(s)	401, 579
HindIII	AAGCTT	2 cut(s)	683, 752
HinfI	GANTC	6 cut(s)	189, 672, 691, 1144, 1408, 1527
HphI	GGTGA	3 cut(s)	361, 667, 901
Hpy166II	GTNNAC	4 cut(s)	613, 731, 892, 1025
Hpy188I	TCNGA	5 cut(s)	147, 315, 412, 690, 1471
Hpy8I	GTNNAC	4 cut(s)	613, 731, 892, 1025
Hpy99I	CGWCG	1 cut(s)	426
HpyAV	CCTTC	6 cut(s)	291, 528, 975, 1098, 1158, 1562
HpyCH4III	ACNGT	4 cut(s)	664, 810, 1401, 1619
HpyCH4IV	ACGT	4 cut(s)	484, 1120, 1128, 1353
HpyF10VI	GCNNNNNNNGC	2 cut(s)	928, 1102
HpyF3I	CTNAG	6 cut(s)	74, 122, 135, 635, 1010, 1340
HpySE526I	ACGT	4 cut(s)	484, 1120, 1128, 1353
Hsp92I	GRCGYC	1 cut(s)	424
HspAI	GCGC	2 cut(s)	401, 579
Kzo9I	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
LmnI	GCTCC	1 cut(s)	1101
Lsp1109I	GCAGC	2 cut(s)	24, 469
LweI	GCATC	2 cut(s)	135, 1447
MaeI	CTAG	4 cut(s)	695, 704, 923, 1163
MaeII	ACGT	4 cut(s)	484, 1120, 1128, 1353
MaeIII	GTNAC	2 cut(s)	835, 1131
MalI	GATC	7 cut(s)	317, 338, 360, 708, 746, 1065, 1203
MbiI	CCGCTC	1 cut(s)	1207
MboI	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
MflI	RGATCY	3 cut(s)	315, 706, 744
MhlI	GDGCHC	2 cut(s)	988, 1027
MlsI	TGGCCA	1 cut(s)	278
MluNI	TGGCCA	1 cut(s)	278
MlyI	GAGTC	2 cut(s)	1417, 1536
MmeI	TCCRAC	3 cut(s)	293, 1246, 1420
Mox20I	TGGCCA	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	517
MscI	TGGCCA	1 cut(s)	278
MseI	TTAA	8 cut(s)	81, 587, 711, 813, 831, 959, 1077, 1316
MslI	CAYNNNNRTG	4 cut(s)	377, 720, 887, 1352
Msp20I	TGGCCA	1 cut(s)	278
MspA1I	CMGCKG	2 cut(s)	543, 1102
MspCI	CTTAAG	1 cut(s)	710
MspR9I	CCNGG	1 cut(s)	1322
Mva1269I	GAATGC	1 cut(s)	715
MvaI	CCWGG	1 cut(s)	1322
MwoI	GCNNNNNNNGC	2 cut(s)	928, 1102
NdeII	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
NlaIV	GGNNCC	2 cut(s)	317, 505
NsbI	TGCGCA	1 cut(s)	402
NspI	RCATGY	2 cut(s)	312, 1538
OliI	CACNNNNGTG	1 cut(s)	377
PaeR7I	CTCGAG	1 cut(s)	1460
PciI	ACATGT	1 cut(s)	308
PctI	GAATGC	1 cut(s)	715
PdmI	GAANNNNTTC	1 cut(s)	517
PfeI	GAWTC	4 cut(s)	189, 672, 691, 1144
PflMI	CCANNNNNTGG	1 cut(s)	775
PkrI	GCNGC	4 cut(s)	11, 14, 459, 1104
PleI	GAGTC	2 cut(s)	1416, 1535
PpsI	GAGTC	2 cut(s)	1416, 1535
PscI	ACATGT	1 cut(s)	308
PsiI	TTATAA	1 cut(s)	914
Psp6I	CCWGG	1 cut(s)	1320
PspEI	GGTNACC	1 cut(s)	835
PspFI	CCCAGC	2 cut(s)	539, 1628
PspGI	CCWGG	1 cut(s)	1320
PspN4I	GGNNCC	2 cut(s)	317, 505
PspPI	GGNCC	2 cut(s)	139, 504
PsuI	RGATCY	3 cut(s)	315, 706, 744
RsaI	GTAC	3 cut(s)	620, 907, 1616
RsaNI	GTAC	3 cut(s)	619, 906, 1615
RseI	CAYNNNNRTG	4 cut(s)	377, 720, 887, 1352
SaqAI	TTAA	8 cut(s)	81, 587, 711, 813, 831, 959, 1077, 1316
SatI	GCNGC	4 cut(s)	10, 13, 458, 1103
Sau3AI	GATC	7 cut(s)	315, 336, 358, 706, 744, 1063, 1201
Sau96I	GGNCC	2 cut(s)	139, 504
ScaI	AGTACT	1 cut(s)	1616
SchI	GAGTC	2 cut(s)	1417, 1536
ScrFI	CCNGG	1 cut(s)	1322
SduI	GDGCHC	2 cut(s)	988, 1027
SfaNI	GCATC	2 cut(s)	135, 1447
Sfr274I	CTCGAG	1 cut(s)	1460
SlaI	CTCGAG	1 cut(s)	1460
SmiMI	CAYNNNNRTG	4 cut(s)	377, 720, 887, 1352
SmlI	CTYRAG	4 cut(s)	640, 710, 749, 1460
SmoI	CTYRAG	4 cut(s)	640, 710, 749, 1460
SsiI	CCGC	7 cut(s)	10, 169, 331, 543, 943, 1102, 1205
SspMI	CTAG	4 cut(s)	695, 704, 923, 1163
StyD4I	CCNGG	1 cut(s)	1320
StyI	CCWWGG	2 cut(s)	16, 651
TaaI	ACNGT	4 cut(s)	664, 810, 1401, 1619
TaiI	ACGT	4 cut(s)	487, 1123, 1131, 1356
TaqI	TCGA	3 cut(s)	421, 1332, 1461
TatI	WGTACW	2 cut(s)	618, 1614
TauI	GCSGC	2 cut(s)	12, 1105
TfiI	GAWTC	4 cut(s)	189, 672, 691, 1144
Tru1I	TTAA	8 cut(s)	81, 587, 711, 813, 831, 959, 1077, 1316
Tru9I	TTAA	8 cut(s)	81, 587, 711, 813, 831, 959, 1077, 1316
TscAI	CASTG	5 cut(s)	222, 532, 733, 1145, 1485
TseI	GCWGC	2 cut(s)	12, 457
TspGWI	ACGGA	1 cut(s)	1490
TspRI	CASTG	5 cut(s)	222, 532, 733, 1145, 1485
Van91I	CCANNNNNTGG	1 cut(s)	775
Vha464I	CTTAAG	1 cut(s)	710
VneI	GTGCAC	1 cut(s)	1023
XapI	RAATTY	3 cut(s)	417, 791, 1328
XbaI	TCTAGA	2 cut(s)	694, 703
XceI	RCATGY	2 cut(s)	312, 1538
XhoI	CTCGAG	1 cut(s)	1460
XmnI	GAANNNNTTC	1 cut(s)	517
XspI	CTAG	4 cut(s)	695, 704, 923, 1163
ZrmI	AGTACT	1 cut(s)	1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.