Rw7G022850

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27240893 .. 27244175
3283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G022850.1

Sequence Viewer

Length: 2868 bp
ATGGCAGAGAGTTCGGTTATTTATCTGCTGGAAAAGCTTGCAGACATTTTCGAAAATGACGACCACTTGTTGGGAGTCCTATTCGGAGGTGTTAGAGAAGAAGGGGTCTATCTTCGAGGAGAATTTGAAAGGATGAGAGCCTTCCTGAGGACTGCAGATGCATTGCAAGAAACTGATCAGGAAGTCGAAGTCTGGGTCAAGCAAGTCAGAGATGTTGCTCATGAAGCTGAAGATATTCTAGATGAATTCACCTTGCTCCACAAACATGATCACGGCCAAGGAATCTATGGTTCTCTACGCACTTTGGGATGCTGTATCAAGAATGCAAAAGCTTGTTACCGAATCGCTTCCGAGTTAAAAGCCATCAACTCAAGAATCAAAAACATTTCTGAGGTTCATAAGAGACTCCGTCACAAGTTCATCAAAGCTGAACAAGGTCCAGGATCTGATAGTGTGGGAAATACATGGCAAGACCGTCGGGGAGATGCCCTTCTTTTAGATGTATCTGATCTTGTGGGCCTTGATGAGCCTAAAAAACAGCTGGTGGGGTGGCTGTTTAAGAGTAGTCCTGGGCGGAAAGTGGTTTCATTGGCTGGAATGGGGGGGATGGGGAAGTCCACTTTGGCAAAGCAAGTCTATGATGATCCAGAAGTGAAAAAACATTTCAAAGTGTGTGCATGGATCACTGTCAATCGATCCTTCAAATCTGGAGAAATTCTCAAAGACATGGCTCAACAACTCTTCAAAGCAATCCGGAGACGAGTTCCACAAGTAGTCGCAAACATGGACAATGATCAGCTGAAGACAACAATCAAGGAGCTGCTGCAGCAAAGGAGGTACCTGATTGTTTTGGATGATGTATGGCACCTGTGTGAATGGCATGCTATTCAAAACGCATTGCCTAACAACAGTTGTGGCAGCCGAATTATGCTCACTACAAGAAATTCAGAAGTAGCCTCCACCACTTGTGTACTCTCTGATGATAAGACCTATGAGTTAAAGCCCTTGCCTCCTCCAGAGTCTTGGGAACTATTTTGCAGAAAGGCATTTCGGCATAACAAATGCCCTCCTCACTTGGAGGATATATGTAAGGACATCTTAAAAAAATGTGAGGGTCTTCCCCTTGCGATTGTTGCAATCAGTGGTGTTTTGGCTACAAAAGATACAAGACGGATTGATGAGTGGGATATGGTTAGCCGCAGCCTTGGGGCAGAAATTGAGGGTAATGACAAGCTCAGCTATTTGAAAAAGGTTCTTTCACTCAGTTTTAGTGATTTGCCTTACTTCCTCAAATCGTGCTTCTTATACCTGAGCATCTTCCCTGAGGGCCATCTGATTCAACGCATGAGGCTAATCCGGTTATGGGTAGCAGAGGGATTCATTGAAGCTAAAGAGGGGAGAACACTGGAAGAAGTAGCAGATGACTATCTCCATGAACTCTTGAACAGAAGCCTAATGCAAGTGGCCACAACTACTCCTGATGGAAGGGTCAAAACATGTCGGATCCATGACCTTTTGCGGGAGATCATCATCTCCAAGTCAAGAGATCAAAACTTCACCACAATTGTGAAAGAAAAAAGTGTGCCTGCGCAATGGTCTGATAAAATTCGACGTCTATCTATACATAACAGGCTACAATCTGTGCAGCCAAACAGGTCAGTTTCCCAATTACGTTCGTTATTCATGTTTGGGGCCAGTAGAAAGCCTTCCATCACCGCATTATTCCCCAGCGGCTTTAGGCTGCTAAATGTGTTGGACTTGCATAGCGCACCTTTAAAAAGATTTCCAGTTGAAGTTGTGGACTTGTACTTCTTGAAATACCTGAGCTTGAGGGAAACCAAGGTGAAAACTGTTCCAAGATTCATTGGGAAGCTTCAGAATCTAGAAACTCTAGATCTTAAGCATTCCTATGTCAGTGAACTCCCTGATGAGATCCTCAAGCTTCAACGCCTACGCCATCTTCTGGTATATAAGCATGAATTTGTGTCTTATGAACAGTTTAATTCAAAGAATGGATTTAAGGTTACCCCCAAAATAGGTGTCTTGCGAGCATTACAAAAGCTCTGTTTCATAGAGGTGAACCAAGATGATGGCACAATTATAAGAGAGCTAGGGAAGCTAACTCAACTGCGGAGGTTAGGTCTTTTAAAATTGAGAAAAGCAGATGGAAAGGCTCTATGTTCGTCCATTGCAAAGCTGAGTAATCTTCGTGCACTATCCATAGCTTCAGTGGAAGAAGATGAGACCATTGATCTTCAACACCTATATTCTCCTCCTTCGTTGCTCCAGCGGCTCTACATGAGAGGACGTTTGGACGCATTACCCCACTGGATTCCTTCTCTTCCAAGCCTAGTGAGATTGTCCCTGAAATGGAGTAGGCTAAAGGATGATCCGCTCATCTCTCTACGACATATTCCCAATCTTGTTCAACTTGAATTATGTCAAGTATTTGTTGGAGACAGATTGTGTTTCAAGGCTGATGGGTTTAGAAAGCTGAAGATTTTAAGCCTGGAGAAATTCGATGAACTTAGGTGCATAGACGTGGAGATGGGTGCAATGGAATGTCTTGAAAAGCTAAGCATCCAACGGTGTAAGCGTCTGGAGAATGTGCCATCAGGGATTGAGCATCTGCATAAGTTGAAATTTCTTGAGTTTTCTGATATGCCAGTGGATTTGATGAAGACAATCCGTCCAGATGGAAAAGATAATTGGAGAGTCTCGCATGTCCCCGAAGTTTATTCAACATACTGGAGAGAAGGGGGATGGGAGGTGTATTCCATAGACAGCATGACTGATGGAGAGTACTGTCCCCTGCCCAGCAATCTCTTCAGCCACGAACTCCAAACAAGATGGAAATCGTGGAAGTAA

Protein Analysis

955

Amino Acids

109.82

Weight (kDa)

8.96

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 91 2.1e-19 Rx N-terminal domain
NB-ARC PF00931 176 - 354 2.3e-43 NB-ARC domain
WHD_DRP PF23559 439 - 510 1.2e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 556 - 882 7.1e-48 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2102
AatII GACGTC 1 cut(s) 1615
Acc16I TGCGCA 1 cut(s) 1590
Acc65I GGTACC 1 cut(s) 837
AccB1I GGYRCC 2 cut(s) 837, 864
AccB7I CCANNNNNTGG 2 cut(s) 70, 1963
AccBSI CCGCTC 1 cut(s) 2395
AccIII TCCGGA 1 cut(s) 753
AciI CCGC 8 cut(s) 574, 1198, 1519, 1716, 1731, 2131, 2290, 2393
AclWI GGATC 8 cut(s) 451, 638, 689, 690, 1498, 1511, 1927, 2384
AcoI YGGCCR 2 cut(s) 274, 1464
AcsI RAATTY 8 cut(s) 122, 245, 714, 943, 1605, 1979, 2516, 2642
AcuI CTGAAG 6 cut(s) 249, 821, 1859, 2211, 2516, 2812
AcyI GRCGYC 1 cut(s) 1612
AfaI GTAC 4 cut(s) 839, 972, 1808, 2804
AfiI CCNNNNNNNGG 7 cut(s) 70, 147, 1363, 1519, 1963, 2036, 2370
AflII CTTAAG 1 cut(s) 1898
AflIII ACRYGT 1 cut(s) 1496
AhdI GACNNNNNGTC 1 cut(s) 2688
AjiI CACGTC 1 cut(s) 2542
AjnI CCWGG 3 cut(s) 439, 568, 2508
AjuI GAANNNNNNNTTGG 4 cut(s) 605, 637, 2692, 2724
AleI CACNNNNGTG 2 cut(s) 870, 1565
Alw21I GWGCWC 1 cut(s) 2215
Alw26I GTCTC 5 cut(s) 397, 751, 2237, 2451, 2722
Alw44I GTGCAC 1 cut(s) 2211
AlwI GGATC 8 cut(s) 451, 638, 689, 690, 1498, 1511, 1927, 2384
AlwNI CAGNNNCTG 1 cut(s) 446
Aor13HI TCCGGA 1 cut(s) 753
AoxI GGCC 5 cut(s) 274, 517, 1327, 1464, 1692
ApaLI GTGCAC 1 cut(s) 2211
ApeKI GCWGC 7 cut(s) 820, 823, 826, 918, 1200, 1645, 1741
ApoI RAATTY 8 cut(s) 122, 245, 714, 943, 1605, 1979, 2516, 2642
ArsI GACNNNNNNTTYG 4 cut(s) 180, 212, 2025, 2057
Asp700I GAANNNNTTC 3 cut(s) 234, 346, 1705
Asp718I GGTACC 1 cut(s) 837
AspLEI GCGC 2 cut(s) 1591, 1769
AspS9I GGNCC 4 cut(s) 437, 517, 1327, 1692
AsuHPI GGTGA 5 cut(s) 241, 1549, 1705, 1855, 2089
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 1 cut(s) 437
AxyI CCTNAGG 2 cut(s) 146, 1323
BaeGI GKGCMC 1 cut(s) 2215
BalI TGGCCA 1 cut(s) 1466
BamHI GGATCC 1 cut(s) 1503
BanI GGYRCC 2 cut(s) 837, 864
BarI GAAGNNNNNNTAC 2 cut(s) 1690, 1722
BbsI GAAGAC 3 cut(s) 809, 1109, 2687
Bbv12I GWGCWC 1 cut(s) 2215
BbvI GCAGC 7 cut(s) 807, 810, 838, 930, 1212, 1657, 1728
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 3 cut(s) 28, 458, 492
BciT130I CCWGG 3 cut(s) 441, 570, 2510
BclI TGATCA 3 cut(s) 175, 268, 793
BcoDI GTCTC 5 cut(s) 397, 751, 2237, 2451, 2722
BfaI CTAG 5 cut(s) 239, 1883, 1892, 2111, 2351
BfmI CTRYAG 2 cut(s) 153, 824
BfrI CTTAAG 1 cut(s) 1898
BglII AGATCT 1 cut(s) 1894
BlpI GCTNAGC 2 cut(s) 1235, 2576
BmcAI AGTACT 1 cut(s) 2804
Bme1390I CCNGG 3 cut(s) 441, 570, 2510
Bme18I GGWCC 1 cut(s) 437
BmeRI GACNNNNNGTC 1 cut(s) 2688
BmgBI CACGTC 1 cut(s) 2542
BmgT120I GGNCC 4 cut(s) 437, 517, 1327, 1692
BmiI GGNNCC 4 cut(s) 839, 866, 1505, 1693
BmrFI CCNGG 3 cut(s) 441, 570, 2510
BmsI GCATC 6 cut(s) 148, 299, 475, 1323, 2589, 2635
BpiI GAAGAC 3 cut(s) 809, 1109, 2687
BplI GAGNNNNNCTC 2 cut(s) 702, 734
BpmI CTGGAG 6 cut(s) 729, 999, 2270, 2531, 2621, 2770
Bpu10I CCTNAGC 2 cut(s) 1310, 1823
Bpu1102I GCTNAGC 2 cut(s) 1235, 2576
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 4 cut(s) 355, 1849, 1922, 2669
Bsa29I ATCGAT 1 cut(s) 694
BsaBI GATNNNNATC 3 cut(s) 1425, 1529, 2854
BsaHI GRCGYC 1 cut(s) 1612
BsaI GGTCTC 1 cut(s) 2237
BsaJI CCNNGG 4 cut(s) 277, 569, 1204, 1839
BsaWI WCCGGW 2 cut(s) 753, 1356
BsaXI ACNNNNNCTCC 4 cut(s) 1459, 1489, 2125, 2155
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 147, 1363, 1519, 1963, 2036, 2370
Bse1I ACTGG 6 cut(s) 1410, 1695, 1787, 2333, 2666, 2753
Bse21I CCTNAGG 2 cut(s) 146, 1323
Bse3DI GCAATG 5 cut(s) 161, 896, 1598, 2187, 2562
Bse8I GATNNNNATC 3 cut(s) 1425, 1529, 2854
BseAI TCCGGA 1 cut(s) 753
BseBI CCWGG 3 cut(s) 441, 570, 2510
BseCI ATCGAT 1 cut(s) 694
BseDI CCNNGG 4 cut(s) 277, 569, 1204, 1839
BseGI GGATG 7 cut(s) 138, 314, 612, 859, 2392, 2580, 2768
BseJI GATNNNNATC 3 cut(s) 1425, 1529, 2854
BseLI CCNNNNNNNGG 7 cut(s) 70, 147, 1363, 1519, 1963, 2036, 2370
BseMI GCAATG 5 cut(s) 161, 896, 1598, 2187, 2562
BseMII CTCAG 8 cut(s) 137, 381, 1249, 1276, 1301, 1314, 1814, 2189
BseNI ACTGG 6 cut(s) 1410, 1695, 1787, 2333, 2666, 2753
BseRI GAGGAG 4 cut(s) 132, 1002, 1059, 2262
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 7 cut(s) 807, 810, 838, 930, 1212, 1657, 1728
BseYI CCCAGC 2 cut(s) 1727, 2816
BsgI GTGCAG 1 cut(s) 1664
BshFI GGCC 5 cut(s) 276, 519, 1329, 1466, 1694
BshNI GGYRCC 2 cut(s) 837, 864
BshVI ATCGAT 1 cut(s) 694
BsiHKAI GWGCWC 1 cut(s) 2215
BsiSI CCGG 2 cut(s) 754, 1357
BslFI GGGAC 3 cut(s) 2347, 2711, 2793
BslI CCNNNNNNNGG 7 cut(s) 70, 147, 1363, 1519, 1963, 2036, 2370
BsmAI GTCTC 5 cut(s) 397, 751, 2237, 2451, 2722
BsmBI CGTCTC 1 cut(s) 751
BsmFI GGGAC 3 cut(s) 2347, 2711, 2793
BsmI GAATGC 2 cut(s) 328, 1903
BsnI GGCC 5 cut(s) 276, 519, 1329, 1466, 1694
Bso31I GGTCTC 1 cut(s) 2237
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 2215
Bsp13I TCCGGA 1 cut(s) 753
Bsp1720I GCTNAGC 2 cut(s) 1235, 2576
BspACI CCGC 8 cut(s) 574, 1198, 1519, 1716, 1731, 2131, 2290, 2393
BspANI GGCC 5 cut(s) 276, 519, 1329, 1466, 1694
BspCNI CTCAG 8 cut(s) 138, 382, 1248, 1275, 1302, 1315, 1815, 2190
BspDI ATCGAT 1 cut(s) 694
BspEI TCCGGA 1 cut(s) 753
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 4 cut(s) 839, 866, 1505, 1693
BspMAI CTGCAG 2 cut(s) 157, 828
BspPI GGATC 8 cut(s) 451, 638, 689, 690, 1498, 1511, 1927, 2384
BspT104I TTCGAA 1 cut(s) 51
BspT107I GGYRCC 2 cut(s) 837, 864
BspTI CTTAAG 1 cut(s) 1898
BspTNI GGTCTC 1 cut(s) 2237
BsrBI CCGCTC 1 cut(s) 2395
BsrDI GCAATG 5 cut(s) 161, 896, 1598, 2187, 2562
BsrI ACTGG 6 cut(s) 1410, 1695, 1787, 2333, 2666, 2753
BssECI CCNNGG 4 cut(s) 277, 569, 1204, 1839
BssNI GRCGYC 1 cut(s) 1612
BssT1I CCWWGG 3 cut(s) 277, 1204, 1839
Bst2UI CCWGG 3 cut(s) 441, 570, 2510
Bst4CI ACNGT 7 cut(s) 476, 688, 911, 1852, 1998, 2589, 2807
Bst6I CTCTTC 3 cut(s) 746, 2346, 2831
BstACI GRCGYC 1 cut(s) 1612
BstAFI CTTAAG 1 cut(s) 1898
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 4 cut(s) 39, 882, 1587, 2049
BstEII GGTNACC 1 cut(s) 2023
BstENI CCTNNNNNAGG 1 cut(s) 145
BstF5I GGATG 7 cut(s) 138, 314, 612, 859, 2392, 2580, 2768
BstHHI GCGC 2 cut(s) 1591, 1769
BstMAI GTCTC 5 cut(s) 397, 751, 2237, 2451, 2722
BstMWI GCNNNNNNNGC 6 cut(s) 34, 224, 826, 1133, 2116, 2290
BstNI CCWGG 3 cut(s) 441, 570, 2510
BstNSI RCATGY 3 cut(s) 884, 1500, 2726
BstPI GGTNACC 1 cut(s) 2023
BstSCI CCNGG 3 cut(s) 439, 568, 2508
BstSFI CTRYAG 2 cut(s) 153, 824
BstSLI GKGCMC 1 cut(s) 2215
BstV1I GCAGC 7 cut(s) 807, 810, 838, 930, 1212, 1657, 1728
BstV2I GAAGAC 3 cut(s) 809, 1109, 2687
BstX2I RGATCY 4 cut(s) 443, 1503, 1894, 1932
BstXI CCANNNNNNTGG 2 cut(s) 1023, 2090
BstYI RGATCY 4 cut(s) 443, 1503, 1894, 1932
Bsu15I ATCGAT 1 cut(s) 694
Bsu36I CCTNAGG 2 cut(s) 146, 1323
BsuRI GGCC 5 cut(s) 276, 519, 1329, 1466, 1694
BsuTUI ATCGAT 1 cut(s) 694
BtrI CACGTC 1 cut(s) 2542
BtsCI GGATG 7 cut(s) 138, 314, 612, 859, 2392, 2580, 2768
BtsIMutI CAGTG 7 cut(s) 684, 1147, 1403, 1921, 2235, 2326, 2673
Cac8I GCNNGC 4 cut(s) 39, 882, 1587, 2049
CaiI CAGNNNCTG 1 cut(s) 446
CciI TCATGA 1 cut(s) 220
CfoI GCGC 2 cut(s) 1591, 1769
Cfr13I GGNCC 4 cut(s) 437, 517, 1327, 1692
ClaI ATCGAT 1 cut(s) 694
CseI GACGC 2 cut(s) 2324, 2585
Csp6I GTAC 4 cut(s) 838, 971, 1807, 2803
CspCI CAANNNNNGTGG 2 cut(s) 895, 930
CviQI GTAC 4 cut(s) 838, 971, 1807, 2803
DraI TTTAAA 2 cut(s) 1776, 2148
DriI GACNNNNNGTC 1 cut(s) 2688
EaeI YGGCCR 2 cut(s) 274, 1464
Eam1104I CTCTTC 3 cut(s) 746, 2346, 2831
Eam1105I GACNNNNNGTC 1 cut(s) 2688
EarI CTCTTC 3 cut(s) 746, 2346, 2831
EciI GGCGGA 1 cut(s) 589
Eco130I CCWWGG 3 cut(s) 277, 1204, 1839
Eco31I GGTCTC 1 cut(s) 2237
Eco47I GGWCC 1 cut(s) 437
Eco57I CTGAAG 6 cut(s) 249, 821, 1859, 2211, 2516, 2812
Eco81I CCTNAGG 2 cut(s) 146, 1323
Eco91I GGTNACC 1 cut(s) 2023
EcoNI CCTNNNNNAGG 1 cut(s) 145
EcoO65I GGTNACC 1 cut(s) 2023
EcoRI GAATTC 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 439, 568, 2508
EcoT14I CCWWGG 3 cut(s) 277, 1204, 1839
EcoT22I ATGCAT 1 cut(s) 163
ErhI CCWWGG 3 cut(s) 277, 1204, 1839
Esp3I CGTCTC 1 cut(s) 751
FalI AAGNNNNNCTT 2 cut(s) 1082, 1114
FaqI GGGAC 3 cut(s) 2347, 2711, 2793
FauI CCCGC 1 cut(s) 1512
FbaI TGATCA 3 cut(s) 175, 268, 793
FokI GGATG 7 cut(s) 145, 321, 619, 866, 2399, 2567, 2775
FspBI CTAG 5 cut(s) 239, 1883, 1892, 2111, 2351
FspI TGCGCA 1 cut(s) 1590
GlaI GCGC 2 cut(s) 1590, 1768
GsaI CCCAGC 2 cut(s) 1731, 2820
GsuI CTGGAG 6 cut(s) 729, 999, 2270, 2531, 2621, 2770
HaeIII GGCC 5 cut(s) 276, 519, 1329, 1466, 1694
HapII CCGG 2 cut(s) 754, 1357
HgaI GACGC 2 cut(s) 2324, 2585
HhaI GCGC 2 cut(s) 1591, 1769
Hin1I GRCGYC 1 cut(s) 1612
Hin6I GCGC 2 cut(s) 1589, 1767
HinP1I GCGC 2 cut(s) 1589, 1767
HindIII AAGCTT 4 cut(s) 35, 330, 1871, 1940
HpaII CCGG 2 cut(s) 754, 1357
HphI GGTGA 5 cut(s) 241, 1549, 1705, 1855, 2089
Hpy166II GTNNAC 6 cut(s) 618, 971, 1801, 1919, 2080, 2213
Hpy8I GTNNAC 6 cut(s) 618, 971, 1801, 1919, 2080, 2213
Hpy99I CGWCG 2 cut(s) 480, 1614
HpyAV CCTTC 9 cut(s) 95, 151, 500, 709, 1479, 1716, 2286, 2346, 2750
HpyCH4III ACNGT 7 cut(s) 476, 688, 911, 1852, 1998, 2589, 2807
HpyCH4IV ACGT 4 cut(s) 1612, 1672, 2308, 2541
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 224, 826, 1133, 2116, 2290
HpySE526I ACGT 4 cut(s) 1612, 1672, 2308, 2541
Hsp92I GRCGYC 1 cut(s) 1612
HspAI GCGC 2 cut(s) 1589, 1767
Kpn2I TCCGGA 1 cut(s) 753
KpnI GGTACC 1 cut(s) 841
Ksp22I TGATCA 3 cut(s) 175, 268, 793
LmnI GCTCC 3 cut(s) 261, 817, 2289
Lsp1109I GCAGC 7 cut(s) 807, 810, 838, 930, 1212, 1657, 1728
LweI GCATC 6 cut(s) 148, 299, 475, 1323, 2589, 2635
MaeI CTAG 5 cut(s) 239, 1883, 1892, 2111, 2351
MaeII ACGT 4 cut(s) 1612, 1672, 2308, 2541
MaeIII GTNAC 3 cut(s) 335, 410, 2023
MbiI CCGCTC 1 cut(s) 2395
MfeI CAATTG 1 cut(s) 1563
MflI RGATCY 4 cut(s) 443, 1503, 1894, 1932
MhlI GDGCHC 1 cut(s) 2215
MlsI TGGCCA 1 cut(s) 1466
MluNI TGGCCA 1 cut(s) 1466
MlyI GAGTC 4 cut(s) 84, 399, 1028, 2724
MmeI TCCRAC 4 cut(s) 1481, 1734, 2434, 2608
Mox20I TGGCCA 1 cut(s) 1466
Mph1103I ATGCAT 1 cut(s) 163
MroI TCCGGA 1 cut(s) 753
MroXI GAANNNNTTC 3 cut(s) 234, 346, 1705
MscI TGGCCA 1 cut(s) 1466
MslI CAYNNNNRTG 6 cut(s) 264, 870, 1565, 1908, 2075, 2540
Msp20I TGGCCA 1 cut(s) 1466
MspA1I CMGCKG 4 cut(s) 541, 799, 1731, 2290
MspCI CTTAAG 1 cut(s) 1898
MspI CCGG 2 cut(s) 754, 1357
MspR9I CCNGG 3 cut(s) 441, 570, 2510
MunI CAATTG 1 cut(s) 1563
Mva1269I GAATGC 2 cut(s) 328, 1903
MvaI CCWGG 3 cut(s) 441, 570, 2510
MwoI GCNNNNNNNGC 6 cut(s) 34, 224, 826, 1133, 2116, 2290
NlaIV GGNNCC 4 cut(s) 839, 866, 1505, 1693
NmuCI GTSAC 1 cut(s) 410
NsbI TGCGCA 1 cut(s) 1590
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 3 cut(s) 884, 1500, 2726
NspV TTCGAA 1 cut(s) 51
OliI CACNNNNGTG 2 cut(s) 870, 1565
PaeI GCATGC 1 cut(s) 884
PagI TCATGA 1 cut(s) 220
PciI ACATGT 1 cut(s) 1496
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 2593
PctI GAATGC 2 cut(s) 328, 1903
PdmI GAANNNNTTC 3 cut(s) 234, 346, 1705
PfeI GAWTC 8 cut(s) 282, 342, 375, 1336, 1377, 1860, 1879, 2332
PflFI GACNNNGTC 1 cut(s) 408
PflMI CCANNNNNTGG 2 cut(s) 70, 1963
PfoI TCCNGGA 1 cut(s) 439
PleI GAGTC 4 cut(s) 83, 399, 1027, 2723
PpsI GAGTC 4 cut(s) 83, 399, 1027, 2723
PscI ACATGT 1 cut(s) 1496
PsiI TTATAA 1 cut(s) 2102
Psp6I CCWGG 3 cut(s) 439, 568, 2508
PspEI GGTNACC 1 cut(s) 2023
PspFI CCCAGC 2 cut(s) 1727, 2816
PspGI CCWGG 3 cut(s) 439, 568, 2508
PspN4I GGNNCC 4 cut(s) 839, 866, 1505, 1693
PspPI GGNCC 4 cut(s) 437, 517, 1327, 1692
PstI CTGCAG 2 cut(s) 157, 828
PstNI CAGNNNCTG 1 cut(s) 446
PsuI RGATCY 4 cut(s) 443, 1503, 1894, 1932
PsyI GACNNNGTC 1 cut(s) 408
PvuII CAGCTG 2 cut(s) 541, 799
RsaI GTAC 4 cut(s) 839, 972, 1808, 2804
RsaNI GTAC 4 cut(s) 838, 971, 1807, 2803
RseI CAYNNNNRTG 6 cut(s) 264, 870, 1565, 1908, 2075, 2540
Sau96I GGNCC 4 cut(s) 437, 517, 1327, 1692
ScaI AGTACT 1 cut(s) 2804
SchI GAGTC 4 cut(s) 84, 399, 1028, 2724
ScrFI CCNGG 3 cut(s) 441, 570, 2510
SduI GDGCHC 1 cut(s) 2215
SfaNI GCATC 6 cut(s) 148, 299, 475, 1323, 2589, 2635
SfcI CTRYAG 2 cut(s) 153, 824
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 1 cut(s) 437
SmiMI CAYNNNNRTG 6 cut(s) 264, 870, 1565, 1908, 2075, 2540
SmlI CTYRAG 5 cut(s) 370, 1828, 1898, 1937, 2648
SmoI CTYRAG 5 cut(s) 370, 1828, 1898, 1937, 2648
SphI GCATGC 1 cut(s) 884
SsiI CCGC 8 cut(s) 574, 1198, 1519, 1716, 1731, 2131, 2290, 2393
SspMI CTAG 5 cut(s) 239, 1883, 1892, 2111, 2351
StyD4I CCNGG 3 cut(s) 439, 568, 2508
StyI CCWWGG 3 cut(s) 277, 1204, 1839
TaaI ACNGT 7 cut(s) 476, 688, 911, 1852, 1998, 2589, 2807
TaiI ACGT 4 cut(s) 1615, 1675, 2311, 2544
TaqI TCGA 6 cut(s) 51, 115, 186, 694, 1609, 2520
TatI WGTACW 3 cut(s) 970, 1806, 2802
TauI GCSGC 3 cut(s) 1200, 1734, 2293
TfiI GAWTC 8 cut(s) 282, 342, 375, 1336, 1377, 1860, 1879, 2332
TscAI CASTG 7 cut(s) 691, 1147, 1410, 1921, 2235, 2333, 2673
TseFI GTSAC 1 cut(s) 410
TseI GCWGC 7 cut(s) 820, 823, 826, 918, 1200, 1645, 1741
Tsp45I GTSAC 1 cut(s) 410
TspGWI ACGGA 3 cut(s) 398, 1186, 2678
TspRI CASTG 7 cut(s) 691, 1147, 1410, 1921, 2235, 2333, 2673
Tth111I GACNNNGTC 1 cut(s) 408
Van91I CCANNNNNTGG 2 cut(s) 70, 1963
Vha464I CTTAAG 1 cut(s) 1898
VneI GTGCAC 1 cut(s) 2211
VpaK11BI GGWCC 1 cut(s) 437
XagI CCTNNNNNAGG 1 cut(s) 145
XapI RAATTY 8 cut(s) 122, 245, 714, 943, 1605, 1979, 2516, 2642
XbaI TCTAGA 3 cut(s) 238, 1882, 1891
XceI RCATGY 3 cut(s) 884, 1500, 2726
XcmI CCANNNNNNNNNTGG 2 cut(s) 284, 2227
XmnI GAANNNNTTC 3 cut(s) 234, 346, 1705
XspI CTAG 5 cut(s) 239, 1883, 1892, 2111, 2351
ZraI GACGTC 1 cut(s) 1613
ZrmI AGTACT 1 cut(s) 2804
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.