Rw7G022820

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27192678 .. 27195538
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G022820.1

Sequence Viewer

Length: 2781 bp
ATGGCAGAGAGTTCGGTTATTTATCTGCTGGAAAAGCTTGCAGACATTTTCGAAAATGACGACCACTTGTTGGGAGTCCTATTCGGAGGTGTTAGAGAAGAAGGGGTCTATCTTCGAGGAGAATTTGAAAGGATGAGAGCCTTCCTGAGGACTGCAGATGCATTGCAAGAAACTGATCAGGAAGTCGAAGTCTGGGTCAAGCAAGTCAGAGATGTTGCTCATGAAGCTGAAGATATTCTAGATGAATTCACCTTGCTCCACAAACATGATCACGGCCAAGGAATCTATGGTTCTCTACGCACTTTGGGATGCTGTATCAAGAATGCAAAAGCTTGTTACCGAATCGCTTCCGAACTCCGTCACAAGTTCATCAAAGCTGAACAAGGTCCAGGATCTGATAGTGTGGGAAATACATGGCAAGACCGTCGGGGAGATGCCCTTCTTTTAGATGTATCTGATCTTGTGGGCCTTGATGAGCCTAAAAAACAGCTGGTGGGGTGGCTGTTTAAGAGTAGTCCTGGGCGGAAAGTGGTTTCATTGGCTGGAATGGGGGGGATGGGGAAGTCCACTTTGGCAAAGCAAGTCTATGATGATCCAGAAGTGAAAAAACATTTCAAAGTGTGTGCATGGATCACTGTCAATCGATCCTTCAAATCTGGAGAAATTCTCAAAGACATGGCTCAACAACTCTTCAAAGCAATCCGGAGACGAGTTCCACAAGTAGTCGCAAACATGGACAATGATCAGCTGAAGACAACAATCAAGGAGCTGCTGCAGCAAAGGAGGTACCTGATTGTTTTGGATGATGTATGGCACCTGTGTGAATGGCATGCTATTCAAAACGCATTGCCTAACAACAGTTGTGGCAGCCGAATTATGCTCACTACAAGAAATTCAGAAACCTATGAGTTAAAGCCCTTGCCTCCTCCAGAGTCTTGGGAACTATTTTGCAGAAAGGCATTTCGGCATAACAAATGCCCTCCTCACTTGGAGGATATATGTAAGGACATCTTAAAAAAATGTGAGGGTCTTCCCCTTGCGATTGTTGCAATCAGTGGTGTTTTGGCTACAAAAGATACAAGACGGATTGATGAGTGGGATATGGTTAGCCGCAGCCTTGGGGCAGAAATTGAGGCTAATGACAAGCTCAGCTATTTGAAAAAGGTTCTTTCACTCAGTTTTAGTGATTTGCCTTACTTCCTCAAATCGTGCTTCTTATACCTGAGCATCTTCCCTGAGGGCCATCTGATTCAACGCATGAGGCTAATCCGGTTATGGGTAGCAGAGGGATTCATTGAAGCTAAAGAGGGGAGAACACTGGAAGAAGTAGCAGATGACTATCTCCATGAACTCTTGAACAGAAGCCTAATGCAAGTGGCCACAACTACTCCTGATGGAAGGGTCAAAACATGTCGGATCCATGACCTTTTGCGGGAGATCATCATCTCCAAGTCAAGAGATCAAAACTTCACCACAATTGTGAAAGAAAAAACTGTGCCTGCGCAATGGTCTGATAAAATTCGACGTCTATCTATACATAACAGGCTACAATCTGTGCAGCCAAACAGGTCAGTTTCCCAATTACGTTCGTTATTCATGTTTGGGGCCAGTAGAAAGCCTTCCATCACCGCATTATTCCCCAGCGGCTTTAGGCTGCTAAATGTGTTGGACTTGCATAGCGCACCTTTAAAAAGATTTCCAGTTGAAGTTGTGGACTTGTACTTCTTGAAATACCTGAGCTTGAGGGAAACCAAGGTGAAAACTGTTCCAAGATTCATTGGGAAGCTTCAGAATCTAGAAACTCTAGATCTTAAGCATTCCTATGTCAGTGAACTCCCTGATGAGATCCTCAAGCTTCAACGCCTACGCCATCTTCTGGTATATAAGCATGAATTTGTGTCTTATGAACAGTTTAATTCAAAGAATGGATTTAAGGTTACCCCCAAAATAGGTGTCTTGCGAGCATTACAAAAGCTCTGTTTCATAGAGGTGAACCAAGATGATGGCACAATTATAAGAGAGCTAGGGAAGCTAACTCAACTGCGGAGGTTAGGTCTTTTAAAATTGAGAAAAGCAGATGGAAAGGCTCTATGTTCGTCCATTGCAAAGCTGAGTAATCTTCGTGCACTATCCATAGCTTCAGTGGAAGAAGATGAGACCATTGATCTTCAACACCTATATTCTCCTCCTTCGTTGCTCCAGCGGCTCTACATGAGAGGACGTTTGGACGCATTACCCCACTGGATTCCTTCTCTTCCAAGCCTAGTGAGATTGTCCCTGAAATGGAGTAGGCTAAAGGATGATCCGCTCATCTCTCTACGACATATTCCCAATCTTGTTCAACTTGAATTATGTCAAGTATTTGTTGGAGACAGATTGTGTTTCAAGGCTGATGGGTTTAGAAAGCTGAAGATTTTAAGCCTGGAGAAATTCGATGAACTTAGGTGCATAGACGTGGAGATGGGTGCAATGGAATGTCTTGAAAAGCTAAGCATCCAACGGTGTAAGCGTCTGGAGAATGTGCCATCAGGGATTGAGCATCTGCATAAGTTGAAATTTCTTGAGTTTTCTGATATGCCAGTGGATTTGATGAAGACAATCCGTCCAGATGGAAAAGATAATTGGAGAGTCTCGCATGTCCCCGAAGTTTATTCAACATACTGGAGAGAAGGGGGATGGGAGGTGTATTCCATAGACAGCATGACTGATGGAGAGTACTGTCCCCTGCCCAGCAATCTCTTCAGCCACGAACTCCAAACAAGATGGAAATCGTGGAAGTAA

Protein Analysis

926

Amino Acids

106.64

Weight (kDa)

8.88

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 91 2.1e-19 Rx N-terminal domain
NB-ARC PF00931 159 - 325 5.1e-38 NB-ARC domain
WHD_DRP PF23559 410 - 481 1.1e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 527 - 853 6.7e-48 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2015
AatII GACGTC 1 cut(s) 1528
Acc16I TGCGCA 1 cut(s) 1503
Acc65I GGTACC 1 cut(s) 786
AccB1I GGYRCC 2 cut(s) 786, 813
AccB7I CCANNNNNTGG 2 cut(s) 70, 1876
AccBSI CCGCTC 1 cut(s) 2308
AccIII TCCGGA 1 cut(s) 702
AciI CCGC 8 cut(s) 523, 1111, 1432, 1629, 1644, 2044, 2203, 2306
AclWI GGATC 8 cut(s) 400, 587, 638, 639, 1411, 1424, 1840, 2297
AcoI YGGCCR 2 cut(s) 274, 1377
AcsI RAATTY 8 cut(s) 122, 245, 663, 892, 1518, 1892, 2429, 2555
AcuI CTGAAG 6 cut(s) 249, 770, 1772, 2124, 2429, 2725
AcyI GRCGYC 1 cut(s) 1525
AfaI GTAC 3 cut(s) 788, 1721, 2717
AfiI CCNNNNNNNGG 7 cut(s) 70, 147, 1276, 1432, 1876, 1949, 2283
AflII CTTAAG 1 cut(s) 1811
AflIII ACRYGT 1 cut(s) 1409
AhdI GACNNNNNGTC 1 cut(s) 2601
AjiI CACGTC 1 cut(s) 2455
AjnI CCWGG 3 cut(s) 388, 517, 2421
AjuI GAANNNNNNNTTGG 4 cut(s) 554, 586, 2605, 2637
AleI CACNNNNGTG 2 cut(s) 819, 1478
Alw21I GWGCWC 1 cut(s) 2128
Alw26I GTCTC 4 cut(s) 700, 2150, 2364, 2635
Alw44I GTGCAC 1 cut(s) 2124
AlwI GGATC 8 cut(s) 400, 587, 638, 639, 1411, 1424, 1840, 2297
AlwNI CAGNNNCTG 1 cut(s) 395
Aor13HI TCCGGA 1 cut(s) 702
AoxI GGCC 5 cut(s) 274, 466, 1240, 1377, 1605
ApaLI GTGCAC 1 cut(s) 2124
ApeKI GCWGC 7 cut(s) 769, 772, 775, 867, 1113, 1558, 1654
ApoI RAATTY 8 cut(s) 122, 245, 663, 892, 1518, 1892, 2429, 2555
ArsI GACNNNNNNTTYG 4 cut(s) 180, 212, 1938, 1970
Asp700I GAANNNNTTC 3 cut(s) 234, 346, 1618
Asp718I GGTACC 1 cut(s) 786
AspLEI GCGC 2 cut(s) 1504, 1682
AspS9I GGNCC 4 cut(s) 386, 466, 1240, 1605
AsuHPI GGTGA 5 cut(s) 241, 1462, 1618, 1768, 2002
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 1 cut(s) 386
AxyI CCTNAGG 2 cut(s) 146, 1236
BaeGI GKGCMC 1 cut(s) 2128
BalI TGGCCA 1 cut(s) 1379
BamHI GGATCC 1 cut(s) 1416
BanI GGYRCC 2 cut(s) 786, 813
BarI GAAGNNNNNNTAC 2 cut(s) 1603, 1635
BbsI GAAGAC 3 cut(s) 758, 1022, 2600
Bbv12I GWGCWC 1 cut(s) 2128
BbvI GCAGC 7 cut(s) 756, 759, 787, 879, 1125, 1570, 1641
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 3 cut(s) 28, 407, 441
BciT130I CCWGG 3 cut(s) 390, 519, 2423
BclI TGATCA 3 cut(s) 175, 268, 742
BcoDI GTCTC 4 cut(s) 700, 2150, 2364, 2635
BfaI CTAG 5 cut(s) 239, 1796, 1805, 2024, 2264
BfmI CTRYAG 2 cut(s) 153, 773
BfrI CTTAAG 1 cut(s) 1811
BglII AGATCT 1 cut(s) 1807
BlpI GCTNAGC 2 cut(s) 1148, 2489
BmcAI AGTACT 1 cut(s) 2717
Bme1390I CCNGG 3 cut(s) 390, 519, 2423
Bme18I GGWCC 1 cut(s) 386
BmeRI GACNNNNNGTC 1 cut(s) 2601
BmgBI CACGTC 1 cut(s) 2455
BmgT120I GGNCC 4 cut(s) 386, 466, 1240, 1605
BmiI GGNNCC 4 cut(s) 788, 815, 1418, 1606
BmrFI CCNGG 3 cut(s) 390, 519, 2423
BmsI GCATC 6 cut(s) 148, 299, 424, 1236, 2502, 2548
BpiI GAAGAC 3 cut(s) 758, 1022, 2600
BplI GAGNNNNNCTC 2 cut(s) 651, 683
BpmI CTGGAG 6 cut(s) 678, 912, 2183, 2444, 2534, 2683
Bpu10I CCTNAGC 2 cut(s) 1223, 1736
Bpu1102I GCTNAGC 2 cut(s) 1148, 2489
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 3 cut(s) 1762, 1835, 2582
Bsa29I ATCGAT 1 cut(s) 643
BsaBI GATNNNNATC 3 cut(s) 1338, 1442, 2767
BsaHI GRCGYC 1 cut(s) 1525
BsaI GGTCTC 1 cut(s) 2150
BsaJI CCNNGG 4 cut(s) 277, 518, 1117, 1752
BsaWI WCCGGW 2 cut(s) 702, 1269
BsaXI ACNNNNNCTCC 4 cut(s) 1372, 1402, 2038, 2068
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 147, 1276, 1432, 1876, 1949, 2283
Bse1I ACTGG 6 cut(s) 1323, 1608, 1700, 2246, 2579, 2666
Bse21I CCTNAGG 2 cut(s) 146, 1236
Bse3DI GCAATG 5 cut(s) 161, 845, 1511, 2100, 2475
Bse8I GATNNNNATC 3 cut(s) 1338, 1442, 2767
BseAI TCCGGA 1 cut(s) 702
BseBI CCWGG 3 cut(s) 390, 519, 2423
BseCI ATCGAT 1 cut(s) 643
BseDI CCNNGG 4 cut(s) 277, 518, 1117, 1752
BseGI GGATG 7 cut(s) 138, 314, 561, 808, 2305, 2493, 2681
BseJI GATNNNNATC 3 cut(s) 1338, 1442, 2767
BseLI CCNNNNNNNGG 7 cut(s) 70, 147, 1276, 1432, 1876, 1949, 2283
BseMI GCAATG 5 cut(s) 161, 845, 1511, 2100, 2475
BseMII CTCAG 7 cut(s) 137, 1162, 1189, 1214, 1227, 1727, 2102
BseNI ACTGG 6 cut(s) 1323, 1608, 1700, 2246, 2579, 2666
BseRI GAGGAG 4 cut(s) 132, 915, 972, 2175
BseSI GKGCMC 1 cut(s) 2128
BseXI GCAGC 7 cut(s) 756, 759, 787, 879, 1125, 1570, 1641
BseYI CCCAGC 2 cut(s) 1640, 2729
BsgI GTGCAG 1 cut(s) 1577
BshFI GGCC 5 cut(s) 276, 468, 1242, 1379, 1607
BshNI GGYRCC 2 cut(s) 786, 813
BshVI ATCGAT 1 cut(s) 643
BsiHKAI GWGCWC 1 cut(s) 2128
BsiSI CCGG 2 cut(s) 703, 1270
BslFI GGGAC 3 cut(s) 2260, 2624, 2706
BslI CCNNNNNNNGG 7 cut(s) 70, 147, 1276, 1432, 1876, 1949, 2283
BsmAI GTCTC 4 cut(s) 700, 2150, 2364, 2635
BsmBI CGTCTC 1 cut(s) 700
BsmFI GGGAC 3 cut(s) 2260, 2624, 2706
BsmI GAATGC 2 cut(s) 328, 1816
BsnI GGCC 5 cut(s) 276, 468, 1242, 1379, 1607
Bso31I GGTCTC 1 cut(s) 2150
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 2128
Bsp13I TCCGGA 1 cut(s) 702
Bsp1720I GCTNAGC 2 cut(s) 1148, 2489
BspACI CCGC 8 cut(s) 523, 1111, 1432, 1629, 1644, 2044, 2203, 2306
BspANI GGCC 5 cut(s) 276, 468, 1242, 1379, 1607
BspCNI CTCAG 7 cut(s) 138, 1161, 1188, 1215, 1228, 1728, 2103
BspDI ATCGAT 1 cut(s) 643
BspEI TCCGGA 1 cut(s) 702
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 4 cut(s) 788, 815, 1418, 1606
BspMAI CTGCAG 2 cut(s) 157, 777
BspPI GGATC 8 cut(s) 400, 587, 638, 639, 1411, 1424, 1840, 2297
BspT104I TTCGAA 1 cut(s) 51
BspT107I GGYRCC 2 cut(s) 786, 813
BspTI CTTAAG 1 cut(s) 1811
BspTNI GGTCTC 1 cut(s) 2150
BsrBI CCGCTC 1 cut(s) 2308
BsrDI GCAATG 5 cut(s) 161, 845, 1511, 2100, 2475
BsrI ACTGG 6 cut(s) 1323, 1608, 1700, 2246, 2579, 2666
BssECI CCNNGG 4 cut(s) 277, 518, 1117, 1752
BssNI GRCGYC 1 cut(s) 1525
BssT1I CCWWGG 3 cut(s) 277, 1117, 1752
Bst2UI CCWGG 3 cut(s) 390, 519, 2423
Bst4CI ACNGT 8 cut(s) 425, 637, 860, 1495, 1765, 1911, 2502, 2720
Bst6I CTCTTC 3 cut(s) 695, 2259, 2744
BstACI GRCGYC 1 cut(s) 1525
BstAFI CTTAAG 1 cut(s) 1811
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 4 cut(s) 39, 831, 1500, 1962
BstDEI CTNAG 9 cut(s) 146, 1148, 1175, 1223, 1236, 1736, 2111, 2441, 2489
BstEII GGTNACC 1 cut(s) 1936
BstENI CCTNNNNNAGG 1 cut(s) 145
BstF5I GGATG 7 cut(s) 138, 314, 561, 808, 2305, 2493, 2681
BstHHI GCGC 2 cut(s) 1504, 1682
BstMAI GTCTC 4 cut(s) 700, 2150, 2364, 2635
BstMWI GCNNNNNNNGC 6 cut(s) 34, 224, 775, 1046, 2029, 2203
BstNI CCWGG 3 cut(s) 390, 519, 2423
BstNSI RCATGY 3 cut(s) 833, 1413, 2639
BstPI GGTNACC 1 cut(s) 1936
BstSCI CCNGG 3 cut(s) 388, 517, 2421
BstSFI CTRYAG 2 cut(s) 153, 773
BstSLI GKGCMC 1 cut(s) 2128
BstV1I GCAGC 7 cut(s) 756, 759, 787, 879, 1125, 1570, 1641
BstV2I GAAGAC 3 cut(s) 758, 1022, 2600
BstX2I RGATCY 4 cut(s) 392, 1416, 1807, 1845
BstXI CCANNNNNNTGG 2 cut(s) 936, 2003
BstYI RGATCY 4 cut(s) 392, 1416, 1807, 1845
Bsu15I ATCGAT 1 cut(s) 643
Bsu36I CCTNAGG 2 cut(s) 146, 1236
BsuRI GGCC 5 cut(s) 276, 468, 1242, 1379, 1607
BsuTUI ATCGAT 1 cut(s) 643
BtrI CACGTC 1 cut(s) 2455
BtsCI GGATG 7 cut(s) 138, 314, 561, 808, 2305, 2493, 2681
BtsIMutI CAGTG 7 cut(s) 633, 1060, 1316, 1834, 2148, 2239, 2586
Cac8I GCNNGC 4 cut(s) 39, 831, 1500, 1962
CaiI CAGNNNCTG 1 cut(s) 395
CciI TCATGA 1 cut(s) 220
CfoI GCGC 2 cut(s) 1504, 1682
Cfr13I GGNCC 4 cut(s) 386, 466, 1240, 1605
ClaI ATCGAT 1 cut(s) 643
CseI GACGC 2 cut(s) 2237, 2498
Csp6I GTAC 3 cut(s) 787, 1720, 2716
CspCI CAANNNNNGTGG 2 cut(s) 844, 879
CviQI GTAC 3 cut(s) 787, 1720, 2716
DdeI CTNAG 9 cut(s) 146, 1148, 1175, 1223, 1236, 1736, 2111, 2441, 2489
DraI TTTAAA 2 cut(s) 1689, 2061
DriI GACNNNNNGTC 1 cut(s) 2601
EaeI YGGCCR 2 cut(s) 274, 1377
Eam1104I CTCTTC 3 cut(s) 695, 2259, 2744
Eam1105I GACNNNNNGTC 1 cut(s) 2601
EarI CTCTTC 3 cut(s) 695, 2259, 2744
EciI GGCGGA 1 cut(s) 538
Eco130I CCWWGG 3 cut(s) 277, 1117, 1752
Eco31I GGTCTC 1 cut(s) 2150
Eco47I GGWCC 1 cut(s) 386
Eco57I CTGAAG 6 cut(s) 249, 770, 1772, 2124, 2429, 2725
Eco81I CCTNAGG 2 cut(s) 146, 1236
Eco91I GGTNACC 1 cut(s) 1936
EcoNI CCTNNNNNAGG 1 cut(s) 145
EcoO65I GGTNACC 1 cut(s) 1936
EcoRI GAATTC 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 388, 517, 2421
EcoT14I CCWWGG 3 cut(s) 277, 1117, 1752
EcoT22I ATGCAT 1 cut(s) 163
ErhI CCWWGG 3 cut(s) 277, 1117, 1752
Esp3I CGTCTC 1 cut(s) 700
FalI AAGNNNNNCTT 2 cut(s) 995, 1027
FaqI GGGAC 3 cut(s) 2260, 2624, 2706
FauI CCCGC 1 cut(s) 1425
FbaI TGATCA 3 cut(s) 175, 268, 742
FokI GGATG 7 cut(s) 145, 321, 568, 815, 2312, 2480, 2688
FspBI CTAG 5 cut(s) 239, 1796, 1805, 2024, 2264
FspI TGCGCA 1 cut(s) 1503
GlaI GCGC 2 cut(s) 1503, 1681
GsaI CCCAGC 2 cut(s) 1644, 2733
GsuI CTGGAG 6 cut(s) 678, 912, 2183, 2444, 2534, 2683
HaeIII GGCC 5 cut(s) 276, 468, 1242, 1379, 1607
HapII CCGG 2 cut(s) 703, 1270
HgaI GACGC 2 cut(s) 2237, 2498
HhaI GCGC 2 cut(s) 1504, 1682
Hin1I GRCGYC 1 cut(s) 1525
Hin6I GCGC 2 cut(s) 1502, 1680
HinP1I GCGC 2 cut(s) 1502, 1680
HindIII AAGCTT 4 cut(s) 35, 330, 1784, 1853
HpaII CCGG 2 cut(s) 703, 1270
HphI GGTGA 5 cut(s) 241, 1462, 1618, 1768, 2002
Hpy166II GTNNAC 5 cut(s) 567, 1714, 1832, 1993, 2126
Hpy8I GTNNAC 5 cut(s) 567, 1714, 1832, 1993, 2126
Hpy99I CGWCG 2 cut(s) 429, 1527
HpyAV CCTTC 9 cut(s) 95, 151, 449, 658, 1392, 1629, 2199, 2259, 2663
HpyCH4III ACNGT 8 cut(s) 425, 637, 860, 1495, 1765, 1911, 2502, 2720
HpyCH4IV ACGT 4 cut(s) 1525, 1585, 2221, 2454
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 224, 775, 1046, 2029, 2203
HpyF3I CTNAG 9 cut(s) 146, 1148, 1175, 1223, 1236, 1736, 2111, 2441, 2489
HpySE526I ACGT 4 cut(s) 1525, 1585, 2221, 2454
Hsp92I GRCGYC 1 cut(s) 1525
HspAI GCGC 2 cut(s) 1502, 1680
Kpn2I TCCGGA 1 cut(s) 702
KpnI GGTACC 1 cut(s) 790
Ksp22I TGATCA 3 cut(s) 175, 268, 742
LmnI GCTCC 3 cut(s) 261, 766, 2202
Lsp1109I GCAGC 7 cut(s) 756, 759, 787, 879, 1125, 1570, 1641
LweI GCATC 6 cut(s) 148, 299, 424, 1236, 2502, 2548
MaeI CTAG 5 cut(s) 239, 1796, 1805, 2024, 2264
MaeII ACGT 4 cut(s) 1525, 1585, 2221, 2454
MaeIII GTNAC 3 cut(s) 335, 359, 1936
MbiI CCGCTC 1 cut(s) 2308
MfeI CAATTG 1 cut(s) 1476
MflI RGATCY 4 cut(s) 392, 1416, 1807, 1845
MhlI GDGCHC 1 cut(s) 2128
MlsI TGGCCA 1 cut(s) 1379
MluNI TGGCCA 1 cut(s) 1379
MlyI GAGTC 3 cut(s) 84, 941, 2637
MmeI TCCRAC 4 cut(s) 1394, 1647, 2347, 2521
Mox20I TGGCCA 1 cut(s) 1379
Mph1103I ATGCAT 1 cut(s) 163
MroI TCCGGA 1 cut(s) 702
MroXI GAANNNNTTC 3 cut(s) 234, 346, 1618
MscI TGGCCA 1 cut(s) 1379
MseI TTAA 9 cut(s) 507, 911, 1013, 1688, 1812, 1914, 1932, 2060, 2417
MslI CAYNNNNRTG 6 cut(s) 264, 819, 1478, 1821, 1988, 2453
Msp20I TGGCCA 1 cut(s) 1379
MspA1I CMGCKG 4 cut(s) 490, 748, 1644, 2203
MspCI CTTAAG 1 cut(s) 1811
MspI CCGG 2 cut(s) 703, 1270
MspR9I CCNGG 3 cut(s) 390, 519, 2423
MunI CAATTG 1 cut(s) 1476
Mva1269I GAATGC 2 cut(s) 328, 1816
MvaI CCWGG 3 cut(s) 390, 519, 2423
MwoI GCNNNNNNNGC 6 cut(s) 34, 224, 775, 1046, 2029, 2203
NlaIV GGNNCC 4 cut(s) 788, 815, 1418, 1606
NmuCI GTSAC 1 cut(s) 359
NsbI TGCGCA 1 cut(s) 1503
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 3 cut(s) 833, 1413, 2639
NspV TTCGAA 1 cut(s) 51
OliI CACNNNNGTG 2 cut(s) 819, 1478
PaeI GCATGC 1 cut(s) 833
PagI TCATGA 1 cut(s) 220
PciI ACATGT 1 cut(s) 1409
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 2506
PctI GAATGC 2 cut(s) 328, 1816
PdmI GAANNNNTTC 3 cut(s) 234, 346, 1618
PfeI GAWTC 7 cut(s) 282, 342, 1249, 1290, 1773, 1792, 2245
PflMI CCANNNNNTGG 2 cut(s) 70, 1876
PfoI TCCNGGA 1 cut(s) 388
PleI GAGTC 3 cut(s) 83, 940, 2636
PpsI GAGTC 3 cut(s) 83, 940, 2636
PscI ACATGT 1 cut(s) 1409
PsiI TTATAA 1 cut(s) 2015
Psp6I CCWGG 3 cut(s) 388, 517, 2421
PspEI GGTNACC 1 cut(s) 1936
PspFI CCCAGC 2 cut(s) 1640, 2729
PspGI CCWGG 3 cut(s) 388, 517, 2421
PspN4I GGNNCC 4 cut(s) 788, 815, 1418, 1606
PspPI GGNCC 4 cut(s) 386, 466, 1240, 1605
PstI CTGCAG 2 cut(s) 157, 777
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 4 cut(s) 392, 1416, 1807, 1845
PvuII CAGCTG 2 cut(s) 490, 748
RsaI GTAC 3 cut(s) 788, 1721, 2717
RsaNI GTAC 3 cut(s) 787, 1720, 2716
RseI CAYNNNNRTG 6 cut(s) 264, 819, 1478, 1821, 1988, 2453
SaqAI TTAA 9 cut(s) 507, 911, 1013, 1688, 1812, 1914, 1932, 2060, 2417
Sau96I GGNCC 4 cut(s) 386, 466, 1240, 1605
ScaI AGTACT 1 cut(s) 2717
SchI GAGTC 3 cut(s) 84, 941, 2637
ScrFI CCNGG 3 cut(s) 390, 519, 2423
SduI GDGCHC 1 cut(s) 2128
SfaNI GCATC 6 cut(s) 148, 299, 424, 1236, 2502, 2548
SfcI CTRYAG 2 cut(s) 153, 773
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 1 cut(s) 386
SmiMI CAYNNNNRTG 6 cut(s) 264, 819, 1478, 1821, 1988, 2453
SmlI CTYRAG 4 cut(s) 1741, 1811, 1850, 2561
SmoI CTYRAG 4 cut(s) 1741, 1811, 1850, 2561
SphI GCATGC 1 cut(s) 833
SsiI CCGC 8 cut(s) 523, 1111, 1432, 1629, 1644, 2044, 2203, 2306
SspMI CTAG 5 cut(s) 239, 1796, 1805, 2024, 2264
StyD4I CCNGG 3 cut(s) 388, 517, 2421
StyI CCWWGG 3 cut(s) 277, 1117, 1752
TaaI ACNGT 8 cut(s) 425, 637, 860, 1495, 1765, 1911, 2502, 2720
TaiI ACGT 4 cut(s) 1528, 1588, 2224, 2457
TaqI TCGA 6 cut(s) 51, 115, 186, 643, 1522, 2433
TatI WGTACW 2 cut(s) 1719, 2715
TauI GCSGC 3 cut(s) 1113, 1647, 2206
TfiI GAWTC 7 cut(s) 282, 342, 1249, 1290, 1773, 1792, 2245
Tru1I TTAA 9 cut(s) 507, 911, 1013, 1688, 1812, 1914, 1932, 2060, 2417
Tru9I TTAA 9 cut(s) 507, 911, 1013, 1688, 1812, 1914, 1932, 2060, 2417
TscAI CASTG 7 cut(s) 640, 1060, 1323, 1834, 2148, 2246, 2586
TseFI GTSAC 1 cut(s) 359
TseI GCWGC 7 cut(s) 769, 772, 775, 867, 1113, 1558, 1654
Tsp45I GTSAC 1 cut(s) 359
TspGWI ACGGA 3 cut(s) 347, 1099, 2591
TspRI CASTG 7 cut(s) 640, 1060, 1323, 1834, 2148, 2246, 2586
Van91I CCANNNNNTGG 2 cut(s) 70, 1876
Vha464I CTTAAG 1 cut(s) 1811
VneI GTGCAC 1 cut(s) 2124
VpaK11BI GGWCC 1 cut(s) 386
XagI CCTNNNNNAGG 1 cut(s) 145
XapI RAATTY 8 cut(s) 122, 245, 663, 892, 1518, 1892, 2429, 2555
XbaI TCTAGA 3 cut(s) 238, 1795, 1804
XceI RCATGY 3 cut(s) 833, 1413, 2639
XcmI CCANNNNNNNNNTGG 2 cut(s) 284, 2140
XmnI GAANNNNTTC 3 cut(s) 234, 346, 1618
XspI CTAG 5 cut(s) 239, 1796, 1805, 2024, 2264
ZraI GACGTC 1 cut(s) 1526
ZrmI AGTACT 1 cut(s) 2717
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.