Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000888

Physical Location & Seq

Genomic Coordinates Reverse (-)

10529169 .. 10532286

Gene Structure 3118 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0134300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAAGAAGCCTCGCCACGGTTCCTTACATATCAAAATCCAAAGCAACGACAACTCTGACACCAAGGACAAAGGAGACAAAAACAACAAGAGCAGCAACCACTACAACAACAATAAAGGGAAGAGCTTCTATGAGCTCTCTCTGTCTTTGATCTTCTCTCTCTGGTGTCTTGTTGTCTTGTTCTACTCTAAGCTTGGTCTTGGCCATGGCAATGGAGGGAATATTTCAGGTCCGAGTAACAGAACTACACATTGTCCTGGTGTTTACAAGGGTAAGCATGGTGAGCATGCATATTCATTTGTGGCAAATGGAGGCGAAAATAAGACAAATGGGATGCTTTTAGATTATAATTCGTCTGAAAGTTGTAATGGTACTGCTGTTGGTCACAACTTGCCAGTTTCGAAGTACTCACTGCCGGAGACAAATGGATTAGAGAAGATAGTTTGGAGAGTTTTGGGTTATAGCAGTTTGGTCTGTGAACTCAACCAAGAACAAGAAGAGCATAACAGAAACTGTCCAGGACAATGTGTGAATAGAACTTCTCACTCTACCTATCTCAATCTTGATGAATTTCGAAACATAACAAAGCAAGAGAAAGACCGTGTAATGCCTAGTCAGCTTGTTAACATTACCCATGGGCTCGAACCTGATGGAACGGAGTACAACTATGCCTCGGAATCCAAGGGGGCAAAGGTGGTGTCTCACAACAAGGAAGCAAAAGGAGCAAGTAACATATTAGGCAAGGATCACGATAAATACCTCAGAAACCCTTGTTCCGTAGAGGGAAAGTTTGTTATAATTGAGCTCGCAGAGGAGACTCTGGTAGATGCTGTCAAAATTGCAAATTTTGAGCACTACTCTTCTAATTTCAAGGAATTTAAATTGTCTGGCAGTTTAAGCTATCCAACAGAAGCATGGTCACCGCTGGGTAGCTTTGTTGCTGCTAATAGTAAGCATGCTCAAACCTTTAAGCTTCCTGAACCCAAATGGGTGAGATACCTAAAGTTGGATTTACTAAGCCACTATGGAGCAGAGTTTTACTGCACACTTAGTGTTCTAGAGGTGTATGGTATTAATGCAATCGAAAGAATGCTTGAAGATCTCATTGTGGAGTCTGCAGAATCTGCAACCAACAAGTTGCCAGAGCCTAATGCAACTGTAATATCTTCTACAAAGGAAGAGGTTGGTCCAACTGACCGGAAAACAAGCAGCGATAGTCAAAATGGGATTGGTGCAGCTGTAGGGATACAAAACACTGAAGAAGCGCAACGAGCCAATTCAGATGCTTCCAAGAATTCAGTAACTACTAACAAGATTCCTGATCCGGTTATGACAGTTAGGCAGCAGCCAAATGGAAGAATTCCTGGTGATTCTGTTCTGAAGATTTTGATGCAGAAGGTGCGGTCACTTGAGCTGAACTTGTCCGTGCTGGAGGAGTTTATCAAAGAATTGAACCGAAGACAAGGCGATGTTTTGCCAGAGCTTGGTAAAGAGATATTAAGAATATCATTGCTGTTGGAGCAAAGCAAAATGGAGATTAAAGATCTCATGCAATGGAAGGAAACTATGGAAAAACAAATGAGTGACCTTGAACTATGGAAAGCTGCTGTCTCGTCTCAATTGAATGCATTGGTCAGGGAAAATAACTTGTTGAGATTAGATTTTGAAAAGGTTGTAAATGATCAAGCCAGTCTTGAAAGCAAAGAGCTTGCTATTTTAGCAGTTAGTCTTTTCTTTTTGTGCTTCGCGATCCTCCAGCTAGTTTCATTTCAAATTTTGACATTTTTCAGAACCTCTCAGCCTGACAACGGATGCAGGAAAAGTAGAGGTTGGGTTTTAGTCATTGTTAGCAGCAGTATGACAATATTCATAACTTTGATATATAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

629

Amino Acids

70.22

Weight (kDa)

6.62

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sad1_UNC	PF07738	235 - 357	2.8e-34	Sad1 / UNC-like C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000888)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g22710 FvH4_5g23390 FvH4_5g23400 FvH4_5g23400 FvH4_5g23420
malus_domestica	MD06G1024500.v1.1 MD09G1164200.v1.1 MD09G1164500.v1.1 MD17G1163600.v1.1
prunus_persica	Prupe.5G025400_v2.0.a1 Prupe.5G025500_v2.0.a1 Prupe.5G025500_v2.0.a1 Prupe.5G025600_v2.0.a1
pyrus_communis	pycom06g01980 pycom09g08130 pycom17g15640
rosa_chinensis	RchiOBHm_Chr7g0211261 RchiOBHm_Chr7g0212451 RchiOBHm_Chr7g0212471 RchiOBHm_Chr7g0212481
rosa_laevigata	RLG00000018806
rosa_multiflora	Rmu_sc0005478.1_g000003 Rmu_sc0007576.1_g000003 Rmu_sc0007576.1_g000004 Rmu_sc0007576.1_g000011 Rmu_sc0007576.1_g000012 Rmu_sc0038076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246770 Rroxscaffold_3G00246780 Rroxscaffold_3G00246790 Rroxscaffold_3G00246810 Rroxscaffold_3G00247970
rosa_rugosa	Rorug02G0251500 Rorug07G0124700 Rorug07G0134000 Rorug07G0134100 Rorug07G0134200 Rorug07G0134300 Rorug07G0134400 Rorug07G0134500 Rorug07G0134500 Rorug07G0134700
rosa_samantha	Rh2AG309900 Rh2AG385400 Rh2BG318600 Rh2CG296800 Rh2CG301800 Rh7BG251100 Rh7BG260900 Rh7BG261000 Rh7CG273800 Rh7CG283800 Rh7CG283900 Rh7CG284100 Rh7DG264700 Rh7DG264800 Rh7DG273700 Rh7DG273800 Rh7DG273900
rosa_wichuraiana	Rw2G025080 Rw7G021970 Rw7G022810 Rw7G022820 Rw7G022840 Rw7G022850 Rw7G022870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	348, 797
AccB7I	CCANNNNNTGG	1 cut(s)	1484
AccII	CGCG	1 cut(s)	1748
AciI	CCGC	2 cut(s)	923, 1402
AclWI	GGATC	3 cut(s)	753, 1316, 1744
AcoI	YGGCCR	1 cut(s)	202
AcsI	RAATTY	6 cut(s)	569, 844, 875, 1294, 1359, 1773
AcuI	CTGAAG	2 cut(s)	1278, 1400
AdeI	CACNNNGTG	1 cut(s)	1052
AfaI	GTAC	3 cut(s)	373, 407, 662
AfiI	CCNNNNNNNGG	4 cut(s)	17, 1006, 1484, 1808
AgsI	TTSAA	8 cut(s)	871, 1097, 1453, 1592, 1624, 1667, 1697, 1772
AjnI	CCWGG	3 cut(s)	256, 517, 1363
Alw21I	GWGCWC	3 cut(s)	138, 807, 855
Alw26I	GTCTC	6 cut(s)	69, 413, 705, 809, 1615, 1620
AlwI	GGATC	3 cut(s)	753, 1316, 1744
AlwNI	CAGNNNCTG	2 cut(s)	513, 1124
AoxI	GGCC	1 cut(s)	202
ApeKI	GCWGC	8 cut(s)	93, 941, 1209, 1235, 1342, 1345, 1604, 1851
ApoI	RAATTY	6 cut(s)	569, 844, 875, 1294, 1359, 1773
ArsI	GACNNNNNNTTYG	2 cut(s)	683, 715
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	1 cut(s)	125
AspLEI	GCGC	1 cut(s)	1267
AspS9I	GGNCC	2 cut(s)	230, 1187
AsuHPI	GGTGA	4 cut(s)	293, 912, 1003, 1379
AsuII	TTCGAA	2 cut(s)	401, 574
AvaII	GGWCC	2 cut(s)	230, 1187
BaeI	ACNNNNGTAYC	2 cut(s)	363, 396
BalI	TGGCCA	1 cut(s)	204
BanII	GRGCYC	3 cut(s)	138, 642, 807
BbsI	GAAGAC	1 cut(s)	1465
Bbv12I	GWGCWC	3 cut(s)	138, 807, 855
BbvI	GCAGC	8 cut(s)	105, 928, 1221, 1247, 1354, 1357, 1591, 1863
BccI	CCATC	1 cut(s)	644
BciT130I	CCWGG	3 cut(s)	258, 519, 1365
BciVI	GTATCC	1 cut(s)	1239
BclI	TGATCA	1 cut(s)	1681
BcoDI	GTCTC	6 cut(s)	69, 413, 705, 809, 1615, 1620
BfaI	CTAG	4 cut(s)	612, 1058, 1760, 1888
BfmI	CTRYAG	2 cut(s)	1116, 1239
BfuI	GTATCC	1 cut(s)	1239
BglII	AGATCT	2 cut(s)	1099, 1543
BisI	GCNGC	8 cut(s)	94, 942, 1210, 1236, 1343, 1346, 1605, 1852
BlsI	GCNGC	8 cut(s)	95, 943, 1211, 1237, 1344, 1347, 1606, 1853
BmcAI	AGTACT	1 cut(s)	407
Bme1390I	CCNGG	3 cut(s)	258, 519, 1365
Bme18I	GGWCC	2 cut(s)	230, 1187
BmgT120I	GGNCC	2 cut(s)	230, 1187
BmiI	GGNNCC	1 cut(s)	22
BmrFI	CCNGG	3 cut(s)	258, 519, 1365
BmsI	GCATC	5 cut(s)	324, 817, 1273, 1380, 1802
BpiI	GAAGAC	1 cut(s)	1465
BplI	GAGNNNNNCTC	2 cut(s)	842, 874
BpmI	CTGGAG	2 cut(s)	1451, 1739
Bpu14I	TTCGAA	2 cut(s)	401, 574
BpuEI	CTTGAG	1 cut(s)	1430
BsaJI	CCNNGG	6 cut(s)	16, 63, 205, 634, 672, 681
BsaWI	WCCGGW	2 cut(s)	1197, 1324
Bsc4I	CCNNNNNNNGG	4 cut(s)	17, 1006, 1484, 1808
Bse1I	ACTGG	2 cut(s)	395, 1689
Bse3DI	GCAATG	3 cut(s)	217, 1508, 1559
BseBI	CCWGG	3 cut(s)	258, 519, 1365
BseDI	CCNNGG	6 cut(s)	16, 63, 205, 634, 672, 681
BseGI	GGATG	2 cut(s)	339, 1817
BseLI	CCNNNNNNNGG	4 cut(s)	17, 1006, 1484, 1808
BseMI	GCAATG	3 cut(s)	217, 1508, 1559
BseMII	CTCAG	2 cut(s)	775, 1811
BseNI	ACTGG	2 cut(s)	395, 1689
BseRI	GAGGAG	2 cut(s)	827, 1448
BseXI	GCAGC	8 cut(s)	105, 928, 1221, 1247, 1354, 1357, 1591, 1863
BseYI	CCCAGC	1 cut(s)	925
BsgI	GTGCAG	2 cut(s)	1027, 1254
Bsh1236I	CGCG	1 cut(s)	1748
BshFI	GGCC	1 cut(s)	204
BsiHKAI	GWGCWC	3 cut(s)	138, 807, 855
BsiSI	CCGG	3 cut(s)	416, 1198, 1325
BslI	CCNNNNNNNGG	4 cut(s)	17, 1006, 1484, 1808
BsmAI	GTCTC	6 cut(s)	69, 413, 705, 809, 1615, 1620
BsmBI	CGTCTC	1 cut(s)	1620
BsmI	GAATGC	2 cut(s)	1095, 1630
BsnI	GGCC	1 cut(s)	204
Bsp119I	TTCGAA	2 cut(s)	401, 574
Bsp1286I	GDGCHC	4 cut(s)	138, 642, 807, 855
Bsp143I	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
Bsp19I	CCATGG	2 cut(s)	205, 634
Bsp68I	TCGCGA	1 cut(s)	1748
BspACI	CCGC	2 cut(s)	923, 1402
BspANI	GGCC	1 cut(s)	204
BspCNI	CTCAG	2 cut(s)	774, 1810
BspFNI	CGCG	1 cut(s)	1748
BspLI	GGNNCC	1 cut(s)	22
BspMAI	CTGCAG	1 cut(s)	1120
BspPI	GGATC	3 cut(s)	753, 1316, 1744
BspQI	GCTCTTC	2 cut(s)	116, 492
BspT104I	TTCGAA	2 cut(s)	401, 574
BsrDI	GCAATG	3 cut(s)	217, 1508, 1559
BsrI	ACTGG	2 cut(s)	395, 1689
BssECI	CCNNGG	6 cut(s)	16, 63, 205, 634, 672, 681
BssMI	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
BssT1I	CCWWGG	4 cut(s)	63, 205, 634, 681
Bst2UI	CCWGG	3 cut(s)	258, 519, 1365
Bst4CI	ACNGT	5 cut(s)	20, 515, 602, 1159, 1336
Bst6I	CTCTTC	4 cut(s)	116, 492, 865, 1173
BstAPI	GCANNNNNTGC	2 cut(s)	1124, 1399
BstBI	TTCGAA	2 cut(s)	401, 574
BstC8I	GCNNGC	4 cut(s)	288, 807, 957, 1710
BstDEI	CTNAG	5 cut(s)	189, 761, 1016, 1049, 1797
BstDSI	CCRYGG	3 cut(s)	16, 205, 634
BstEII	GGTNACC	1 cut(s)	918
BstF5I	GGATG	2 cut(s)	339, 1817
BstFNI	CGCG	1 cut(s)	1748
BstHHI	GCGC	1 cut(s)	1267
BstKTI	GATC	7 cut(s)	153, 748, 1102, 1324, 1546, 1684, 1752
BstMAI	GTCTC	6 cut(s)	69, 413, 705, 809, 1615, 1620
BstMBI	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
BstMWI	GCNNNNNNNGC	9 cut(s)	283, 616, 722, 897, 1124, 1271, 1399, 1519, 1718
BstNI	CCWGG	3 cut(s)	258, 519, 1365
BstNSI	RCATGY	2 cut(s)	290, 959
BstPI	GGTNACC	1 cut(s)	918
BstSCI	CCNGG	3 cut(s)	256, 517, 1363
BstSFI	CTRYAG	2 cut(s)	1116, 1239
BstUI	CGCG	1 cut(s)	1748
BstV1I	GCAGC	8 cut(s)	105, 928, 1221, 1247, 1354, 1357, 1591, 1863
BstV2I	GAAGAC	1 cut(s)	1465
BstX2I	RGATCY	2 cut(s)	1099, 1543
BstXI	CCANNNNNNTGG	1 cut(s)	212
BstYI	RGATCY	2 cut(s)	1099, 1543
BsuI	GTATCC	1 cut(s)	1239
BsuRI	GGCC	1 cut(s)	204
BtgI	CCRYGG	3 cut(s)	16, 205, 634
BtgZI	GCGATG	1 cut(s)	1482
BtsCI	GGATG	2 cut(s)	339, 1817
BtsI	GCAGTG	1 cut(s)	410
BtsIMutI	CAGTG	2 cut(s)	410, 1254
BtuMI	TCGCGA	1 cut(s)	1748
Cac8I	GCNNGC	4 cut(s)	288, 807, 957, 1710
CaiI	CAGNNNCTG	2 cut(s)	513, 1124
CfoI	GCGC	1 cut(s)	1267
Cfr13I	GGNCC	2 cut(s)	230, 1187
Csp6I	GTAC	3 cut(s)	372, 406, 661
CviAII	CATG	7 cut(s)	206, 278, 287, 635, 915, 956, 1549
CviQI	GTAC	3 cut(s)	372, 406, 661
DdeI	CTNAG	5 cut(s)	189, 761, 1016, 1049, 1797
DpnI	GATC	7 cut(s)	152, 747, 1101, 1323, 1545, 1683, 1751
DpnII	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
DraI	TTTAAA	1 cut(s)	880
DraIII	CACNNNGTG	1 cut(s)	1052
EaeI	YGGCCR	1 cut(s)	202
Eam1104I	CTCTTC	4 cut(s)	116, 492, 865, 1173
EarI	CTCTTC	4 cut(s)	116, 492, 865, 1173
Ecl136II	GAGCTC	2 cut(s)	136, 805
Eco130I	CCWWGG	4 cut(s)	63, 205, 634, 681
Eco24I	GRGCYC	3 cut(s)	138, 642, 807
Eco47I	GGWCC	2 cut(s)	230, 1187
Eco53kI	GAGCTC	2 cut(s)	136, 805
Eco57I	CTGAAG	2 cut(s)	1278, 1400
Eco91I	GGTNACC	1 cut(s)	918
EcoICRI	GAGCTC	2 cut(s)	136, 805
EcoO65I	GGTNACC	1 cut(s)	918
EcoRI	GAATTC	2 cut(s)	1294, 1359
EcoRII	CCWGG	3 cut(s)	256, 517, 1363
EcoT14I	CCWWGG	4 cut(s)	63, 205, 634, 681
EcoT22I	ATGCAT	2 cut(s)	292, 1630
EcoT38I	GRGCYC	3 cut(s)	138, 642, 807
ErhI	CCWWGG	4 cut(s)	63, 205, 634, 681
Esp3I	CGTCTC	1 cut(s)	1620
FaeI	CATG	7 cut(s)	209, 281, 290, 638, 918, 959, 1552
FalI	AAGNNNNNCTT	2 cut(s)	1677, 1709
FatI	CATG	7 cut(s)	205, 277, 286, 634, 914, 955, 1548
FbaI	TGATCA	1 cut(s)	1681
Fnu4HI	GCNGC	8 cut(s)	94, 942, 1210, 1236, 1343, 1346, 1605, 1852
FokI	GGATG	2 cut(s)	346, 1824
FriOI	GRGCYC	3 cut(s)	138, 642, 807
Fsp4HI	GCNGC	8 cut(s)	94, 942, 1210, 1236, 1343, 1346, 1605, 1852
FspBI	CTAG	4 cut(s)	612, 1058, 1760, 1888
GlaI	GCGC	1 cut(s)	1266
GluI	GCNGC	8 cut(s)	94, 942, 1210, 1236, 1343, 1346, 1605, 1852
GsaI	CCCAGC	1 cut(s)	929
GsuI	CTGGAG	2 cut(s)	1451, 1739
HaeIII	GGCC	1 cut(s)	204
HapII	CCGG	3 cut(s)	416, 1198, 1325
HhaI	GCGC	1 cut(s)	1267
Hin1II	CATG	7 cut(s)	209, 281, 290, 638, 918, 959, 1552
Hin6I	GCGC	1 cut(s)	1265
HinP1I	GCGC	1 cut(s)	1265
HincII	GTYRAC	1 cut(s)	625
HindII	GTYRAC	1 cut(s)	625
HindIII	AAGCTT	2 cut(s)	191, 971
HinfI	GANTC	6 cut(s)	677, 817, 1112, 1121, 1315, 1370
HpaI	GTTAAC	1 cut(s)	625
HpaII	CCGG	3 cut(s)	416, 1198, 1325
HphI	GGTGA	4 cut(s)	293, 912, 1003, 1379
Hpy166II	GTNNAC	3 cut(s)	265, 479, 625
Hpy188I	TCNGA	8 cut(s)	58, 234, 358, 676, 764, 1282, 1380, 1790
Hpy188III	TCNNGA	7 cut(s)	563, 749, 977, 1058, 1319, 1694, 1747
Hpy8I	GTNNAC	3 cut(s)	265, 479, 625
HpyAV	CCTTC	2 cut(s)	1390, 1552
HpyCH4III	ACNGT	5 cut(s)	20, 515, 602, 1159, 1336
HpyF10VI	GCNNNNNNNGC	9 cut(s)	283, 616, 722, 897, 1124, 1271, 1399, 1519, 1718
HpyF3I	CTNAG	5 cut(s)	189, 761, 1016, 1049, 1797
Hsp92II	CATG	7 cut(s)	209, 281, 290, 638, 918, 959, 1552
HspAI	GCGC	1 cut(s)	1265
Ksp22I	TGATCA	1 cut(s)	1681
KspAI	GTTAAC	1 cut(s)	625
Kzo9I	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
LguI	GCTCTTC	2 cut(s)	116, 492
LmnI	GCTCC	3 cut(s)	722, 1028, 1519
Lsp1109I	GCAGC	8 cut(s)	105, 928, 1221, 1247, 1354, 1357, 1591, 1863
LweI	GCATC	5 cut(s)	324, 817, 1273, 1380, 1802
MaeI	CTAG	4 cut(s)	612, 1058, 1760, 1888
MaeIII	GTNAC	7 cut(s)	236, 383, 728, 918, 1300, 1404, 1583
MalI	GATC	7 cut(s)	152, 747, 1101, 1323, 1545, 1683, 1751
MboI	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
MfeI	CAATTG	1 cut(s)	1619
MflI	RGATCY	2 cut(s)	1099, 1543
MhlI	GDGCHC	4 cut(s)	138, 642, 807, 855
MlsI	TGGCCA	1 cut(s)	204
MluNI	TGGCCA	1 cut(s)	204
MlyI	GAGTC	2 cut(s)	811, 1121
MmeI	TCCRAC	4 cut(s)	929, 987, 1214, 1497
Mox20I	TGGCCA	1 cut(s)	204
Mph1103I	ATGCAT	2 cut(s)	292, 1630
MroXI	GAANNNNTTC	1 cut(s)	125
MscI	TGGCCA	1 cut(s)	204
MseI	TTAA	7 cut(s)	624, 879, 896, 969, 1074, 1499, 1539
MslI	CAYNNNNRTG	1 cut(s)	210
Msp20I	TGGCCA	1 cut(s)	204
MspA1I	CMGCKG	2 cut(s)	925, 1238
MspI	CCGG	3 cut(s)	416, 1198, 1325
MspR9I	CCNGG	3 cut(s)	258, 519, 1365
MunI	CAATTG	1 cut(s)	1619
Mva1269I	GAATGC	2 cut(s)	1095, 1630
MvaI	CCWGG	3 cut(s)	258, 519, 1365
MvnI	CGCG	1 cut(s)	1748
MwoI	GCNNNNNNNGC	9 cut(s)	283, 616, 722, 897, 1124, 1271, 1399, 1519, 1718
NcoI	CCATGG	2 cut(s)	205, 634
NdeII	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
NlaIII	CATG	7 cut(s)	209, 281, 290, 638, 918, 959, 1552
NlaIV	GGNNCC	1 cut(s)	22
NmuCI	GTSAC	4 cut(s)	383, 918, 1404, 1583
NruI	TCGCGA	1 cut(s)	1748
NsiI	ATGCAT	2 cut(s)	292, 1630
NspI	RCATGY	2 cut(s)	290, 959
NspV	TTCGAA	2 cut(s)	401, 574
PaeI	GCATGC	2 cut(s)	290, 959
PciSI	GCTCTTC	2 cut(s)	116, 492
PctI	GAATGC	2 cut(s)	1095, 1630
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	4 cut(s)	677, 1121, 1315, 1370
PflMI	CCANNNNNTGG	1 cut(s)	1484
PfoI	TCCNGGA	1 cut(s)	517
PkrI	GCNGC	8 cut(s)	95, 943, 1211, 1237, 1344, 1347, 1606, 1853
PleI	GAGTC	2 cut(s)	811, 1120
PpsI	GAGTC	2 cut(s)	811, 1120
PshBI	ATTAAT	1 cut(s)	1074
PsiI	TTATAA	2 cut(s)	348, 797
Psp124BI	GAGCTC	2 cut(s)	138, 807
Psp6I	CCWGG	3 cut(s)	256, 517, 1363
PspEI	GGTNACC	1 cut(s)	918
PspFI	CCCAGC	1 cut(s)	925
PspGI	CCWGG	3 cut(s)	256, 517, 1363
PspN4I	GGNNCC	1 cut(s)	22
PspPI	GGNCC	2 cut(s)	230, 1187
PstI	CTGCAG	1 cut(s)	1120
PstNI	CAGNNNCTG	2 cut(s)	513, 1124
PsuI	RGATCY	2 cut(s)	1099, 1543
PvuII	CAGCTG	1 cut(s)	1238
RruI	TCGCGA	1 cut(s)	1748
RsaI	GTAC	3 cut(s)	373, 407, 662
RsaNI	GTAC	3 cut(s)	372, 406, 661
RseI	CAYNNNNRTG	1 cut(s)	210
SacI	GAGCTC	2 cut(s)	138, 807
SapI	GCTCTTC	2 cut(s)	116, 492
SaqAI	TTAA	7 cut(s)	624, 879, 896, 969, 1074, 1499, 1539
SatI	GCNGC	8 cut(s)	94, 942, 1210, 1236, 1343, 1346, 1605, 1852
Sau3AI	GATC	7 cut(s)	150, 745, 1099, 1321, 1543, 1681, 1749
Sau96I	GGNCC	2 cut(s)	230, 1187
ScaI	AGTACT	1 cut(s)	407
SchI	GAGTC	2 cut(s)	811, 1121
ScrFI	CCNGG	3 cut(s)	258, 519, 1365
SduI	GDGCHC	4 cut(s)	138, 642, 807, 855
SfaNI	GCATC	5 cut(s)	324, 817, 1273, 1380, 1802
SfcI	CTRYAG	2 cut(s)	1116, 1239
SfuI	TTCGAA	2 cut(s)	401, 574
SinI	GGWCC	2 cut(s)	230, 1187
SmiI	ATTTAAAT	1 cut(s)	880
SmiMI	CAYNNNNRTG	1 cut(s)	210
SmlI	CTYRAG	1 cut(s)	1409
SmoI	CTYRAG	1 cut(s)	1409
SphI	GCATGC	2 cut(s)	290, 959
SsiI	CCGC	2 cut(s)	923, 1402
SspI	AATATT	2 cut(s)	223, 1866
SspMI	CTAG	4 cut(s)	612, 1058, 1760, 1888
SstI	GAGCTC	2 cut(s)	138, 807
StyD4I	CCNGG	3 cut(s)	256, 517, 1363
StyI	CCWWGG	4 cut(s)	63, 205, 634, 681
SwaI	ATTTAAAT	1 cut(s)	880
TaaI	ACNGT	5 cut(s)	20, 515, 602, 1159, 1336
TaqI	TCGA	4 cut(s)	401, 574, 642, 1083
TatI	WGTACW	2 cut(s)	405, 660
TfiI	GAWTC	4 cut(s)	677, 1121, 1315, 1370
Tru1I	TTAA	7 cut(s)	624, 879, 896, 969, 1074, 1499, 1539
Tru9I	TTAA	7 cut(s)	624, 879, 896, 969, 1074, 1499, 1539
TscAI	CASTG	2 cut(s)	417, 1261
TseFI	GTSAC	4 cut(s)	383, 918, 1404, 1583
TseI	GCWGC	8 cut(s)	93, 941, 1209, 1235, 1342, 1345, 1604, 1851
Tsp45I	GTSAC	4 cut(s)	383, 918, 1404, 1583
TspDTI	ATGAA	5 cut(s)	17, 285, 582, 1755, 1858
TspGWI	ACGGA	4 cut(s)	671, 766, 1414, 1824
TspRI	CASTG	2 cut(s)	417, 1261
Van91I	CCANNNNNTGG	1 cut(s)	1484
VpaK11BI	GGWCC	2 cut(s)	230, 1187
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	6 cut(s)	569, 844, 875, 1294, 1359, 1773
XbaI	TCTAGA	1 cut(s)	1057
XceI	RCATGY	2 cut(s)	290, 959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	912
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	4 cut(s)	612, 1058, 1760, 1888
ZrmI	AGTACT	1 cut(s)	407
Zsp2I	ATGCAT	2 cut(s)	292, 1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.