Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001658

Physical Location & Seq

Genomic Coordinates Forward (+)

16590048 .. 16601231

Gene Structure 11184 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g25110.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2865 bp

ATGGAGCAGCTCAAGACCATCGGGCGGGAGCTCGCCATGGGCTCCCAGGGCGGCTTCGGCCAATCCAAGGAGTTCCTCGACCTCGTCAAGTCCATCGGCGAAGCCCGATCCAAGGCCGAAGAGGAACGCATCGTCCTCCACGAGATCGAAACCCTAAAACGCCGCCTCGCCGAGCCTGACATCCCCAAACGCAAGATGAAGGAGTACCTCATCCGCCTCGTCTACGTAGAAATGCTCGGCCACGACGCCTCCTTCGCTTACATCCACGCCGTCAAGATGACTCACGACGACAATCTCGTCCTCAAACGCACCGGCTACCTCGCCGTCTCTCTCTTCCTCAACGACGACCACGACCTCATCATCCTCATCGTCAACACCATCCAGAAAGACCTCAAATCTGATAACTACCTCGTCGTATGCACCGCGCTCAACGCCGTTTGTAAGCTCATCAACGACGAGACTGTTCCCGCCGTTTTGCCACAGGTCGTGGAGCTGCTGGCGCATCAGAAGGAGGCGGTGCGGAAGAAGGCGATCATGGCGCTGCATAGGTTTTACCAGAAATCGCCGTCGTCGGTTTTGCATCTGGTGTCGAATTTCCGGAAGCGGCTCTGTGATAATGATCCTGGAGTCATGGGAGCCACGCTGTGCCCGTTGTTTGATCTCATTACGATTGATGTGAATACTTATAAGGATTTGGTGGTTAGCTTTGTCAGCATTTTGAGGCAAGTTGCGGAGCGGAGGTTGCCTAAGACGTATGACTACCATCAGCTTCCTGCGCCTTTTATTCAGATCAGGTTGTTGAAGATTTTGGCAATGTTGGGGAGCGGGGATAAGCAAGCGAGTGAGAAGATGTATACGGTAGTCAGTGACATATTTAAGAAGTGTGATTCCACGAGTAATATAGGAAATGCGGTTCTTTACGAGTGTATTTGTTGCGTTTCTGCAATACATCCGAATCCTAAGTTGTTAGATCAGGCTGCTCAAGTCATCTCAAGATTTTTGAAGAGTGACAGTCATAATTTGAAATATATGGGAATTGATGCTCTTGGTCGACTGATCAAGATCAGTCCAGAGATAGCTGAGCAACACCAGTTGGCTGTCATTGATTGCTTAGAGGACCCAGATGATACTTTGAAGCGAAAAACATTTGAACTGTTGTATAAGATGACCAAGTCCTCCAATGTGGAGGTGATTGTTGACCGCATGATTAGTTACATGATAAGCATTAATGATAATCATTACAAAACATATATAGCATCTCGATGCGTGGAGCTTGCTGAGCAATTTGCTCCAAGCAATCAATGGTTTATCCAGACCATGAATAAAGTCTTTGAACATGCTGGAGATTTGGTGAATGTTAAGGTGGCACATAACTTGATGAAATTGATTGCTGAGGGATTTGGAGAGGATGATGATACTGCAGATAGTCAGTTAAGATCATCTGCGGTGGAATCATATTTGCGCATAATTGGAGAGCCAAAGCTTCCGTCTGTATTTCTTCAGGTCATTTGTTGGGTTTTGGGAGAATATGGAACTGCTGATGGAAAGTATTCTGCTTCATATATCACTGGGAAATTATGTGATGTGGCTGAGGCATATTCAAATGATGAAACTGTCAAGGCATATGCTGTTACAGCAATCAAGAAAATATATGCATTTGAAATATCAGCTGGAAGAAAAGTGGAAATGCTACCCGAGTGTCAATCTTTGGTGGAGGAATTATCAGCTTCTCATTCTACAGATCTCCAGCAGCGTGCATATGAATTGCAAGCTGTCATTGGCATAGATGCTCATGCCATTGAGAGTATTATGCCATCAGATGCAAGTTGTGAAGATGTTGAGGCAATAGAAAAAGGTGCTCAGCCATATATTTCTGAGAATGAGCGCACTGGAATGTTAAATATCAACAATTTTAGAAACCAAGATCAGCCTGAAGCTCTAAGTCACAGTCTTCGGTTTGAGGCCTATGAGCTTCCCAAACCACTGGTGCCATCAAGAGTTCCTCCAGCTGCAGTTGCATCCTCAACTGAACTTGTTCCGGTGCCTGAACCATATTATGCTAGGGAGACACACCAGACTGCATCATTGCCATCTGTGTCAGATGCAGGATCATCAGAACTTAAATTACGACTTGACGGTGTTCAGAAGAAATGGGGTAGGCCTACATACTCGTCTTCTGCATCTTTGACCTCAACATCTAGTTCCCACAAAACGACAAACGGGGTAACACAGGTAGATGGTGTGGGTACTTCGAACTCAAAAGGACGTGATACTTATGATTCAAGGAAGCCATCAGTTGAAATTTCTCCAGAAAAGCAGAAGTTGGCCAGTTCACTTTTTGGAGGTTCATCAAGAACAGAGAAGAGGGCATCTTCGGGCAACCATAAAGTGTCCAAGGCCGCAGAGAAGTCGCACGTAGGGAAGGCAGCAGGTGCACACAGTGACACTGTAGTGGAGAAAATAAATCGGGAACCTACTCCAGACTTGCTTGACTTCAGTGATTTAGCTGTTACTAGTACTGCCCCATCTGTAGATCCTTTCCAGCAGTTGGAAGGGCTTCTTGATCAAACTGAAGCTACATCAACCATGAACAATGGTGCAGCAGGTGCTTCAAGAACACCTGAAATTATGGGATTATATGCAGATAGTGCTGTGAGTGGGCTCAGCAGCAGTGTTGCCAATAGAGATGAATTTAATCTTTCATCTGAATTATCAAATGCTGCAAGGACTTCTCAAGTTGGGGTGTCACAATTGAATAAGGGTCCTAACCCTAAAGATTCATTGGAAAAGGATGCACTTGTAAGGCAGATGGGCGTTAACCCCACAAGTCAGAACCCCAACTTGTTTAAAGATTTGCTTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0030117 GO:0030119 GO:0030124 GO:0032991 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048475 GO:0055044 GO:0098796

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N

Protein Analysis

955

Amino Acids

105.06

Weight (kDa)

5.83

Isoelectric Point (pI)

43.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	11 - 340	1.5e-38	Adaptin N terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31730
fragaria_vesca	FvH4_5g19200 FvH4_5g25110 FvH4_5g25110 FvH4_5g25110
malus_domestica	MD02G1267100.v1.1 MD07G1052000.v1.1
prunus_persica	Prupe.2G018400_v2.0.a1 Prupe.2G055800_v2.0.a1 Prupe.2G056200_v2.0.a1 Prupe.2G057700_v2.0.a1 Prupe.2G066700_v2.0.a1 Prupe.2G068200_v2.0.a1
pyrus_communis	pycom02g22880 pycom02g22890 pycom02g22910 pycom07g04030 pycom15g15900
rosa_chinensis	RchiOBHm_Chr1g0351661 RchiOBHm_Chr4g0407221 RchiOBHm_Chr7g0215311
rosa_laevigata	RLG00000002671
rosa_multiflora	Rmu_co8017010.1_g000001 Rmu_co8035246.1_g000001 Rmu_co8165622.1_g000001 Rmu_co8288873.1_g000001 Rmu_sc0000355.1_g000018 Rmu_sc0000542.1_g000006 Rmu_sc0004129.1_g000014 Rmu_sc0005117.1_g000009 Rmu_sc0014840.1_g000006 Rmu_sc0015060.1_g000010 Rmu_sc0015060.1_g000011 Rmu_sc0018122.1_g000005
rosa_roxburghii	Rroxscaffold_3G00244290
rosa_rugosa	Rorug06G0151000 Rorug07G0152000
rosa_samantha	Rh1CG270800 Rh2AG294700 Rh7AG288800 Rh7AG297700 Rh7AG297900 Rh7BG280800 Rh7CG308600 Rh7CG317900 Rh7DG292400
rosa_wichuraiana	Rw7G024690 Rw7G025350 Rw7G028510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	687
AarI	CACCTGC	2 cut(s)	2420, 2594
AasI	GACNNNNNNGTC	1 cut(s)	296
Acc16I	TGCGCA	1 cut(s)	1463
Acc36I	ACCTGC	2 cut(s)	2420, 2594
AccB1I	GGYRCC	2 cut(s)	1987, 2041
AccB7I	CCANNNNNTGG	1 cut(s)	2548
AccBSI	CCGCTC	2 cut(s)	736, 825
AccI	GTMKAC	3 cut(s)	222, 854, 1051
AccII	CGCG	1 cut(s)	425
AccIII	TCCGGA	1 cut(s)	597
AclWI	GGATC	4 cut(s)	102, 614, 2116, 2528
AcoI	YGGCCR	3 cut(s)	58, 238, 2325
AcsI	RAATTY	3 cut(s)	592, 2301, 2690
AcuI	CTGAAG	4 cut(s)	1484, 1953, 2479, 2592
AcyI	GRCGYC	1 cut(s)	246
AdeI	CACNNNGTG	2 cut(s)	645, 2441
AfaI	GTAC	3 cut(s)	206, 2248, 2518
AfiI	CCNNNNNNNGG	4 cut(s)	24, 67, 112, 2548
AhlI	ACTAGT	1 cut(s)	2513
AjiI	CACGTC	1 cut(s)	2267
AjnI	CCWGG	2 cut(s)	45, 622
AleI	CACNNNNGTG	1 cut(s)	2450
AloI	GAACNNNNNNTCC	4 cut(s)	117, 149, 897, 929
Alw21I	GWGCWC	3 cut(s)	33, 1861, 2437
Alw26I	GTCTC	3 cut(s)	331, 452, 2060
Alw44I	GTGCAC	1 cut(s)	2433
AlwI	GGATC	4 cut(s)	102, 614, 2116, 2528
Ama87I	CYCGRG	1 cut(s)	1694
Aor13HI	TCCGGA	1 cut(s)	597
AoxI	GGCC	7 cut(s)	58, 114, 238, 1962, 2159, 2325, 2397
ApaLI	GTGCAC	1 cut(s)	2433
ApoI	RAATTY	3 cut(s)	592, 2301, 2690
ArsI	GACNNNNNNTTYG	4 cut(s)	236, 268, 1472, 1504
AseI	ATTAAT	1 cut(s)	1227
Asp700I	GAANNNNTTC	3 cut(s)	1549, 2034, 2556
AspLEI	GCGC	6 cut(s)	427, 502, 541, 778, 1464, 1887
AspS9I	GGNCC	2 cut(s)	1117, 2762
AsuHPI	GGTGA	2 cut(s)	1201, 1363
AsuII	TTCGAA	1 cut(s)	2252
AvaI	CYCGRG	1 cut(s)	1694
AvaII	GGWCC	2 cut(s)	1117, 2762
BaeGI	GKGCMC	2 cut(s)	650, 2437
BalI	TGGCCA	1 cut(s)	2327
BanI	GGYRCC	2 cut(s)	1987, 2041
BanII	GRGCYC	3 cut(s)	33, 44, 2664
BauI	CACGAG	2 cut(s)	140, 892
BbsI	GAAGAC	2 cut(s)	1943, 2166
Bbv12I	GWGCWC	3 cut(s)	33, 1861, 2437
BbvCI	CCTCAGC	2 cut(s)	1392, 1590
BceAI	ACGGC	5 cut(s)	254, 308, 419, 455, 550
BcgI	CGANNNNNNTGC	2 cut(s)	2391, 2425
BciT130I	CCWGG	2 cut(s)	47, 624
BclI	TGATCA	2 cut(s)	1056, 2563
BcoDI	GTCTC	3 cut(s)	331, 452, 2060
BcuI	ACTAGT	1 cut(s)	2513
BfaI	CTAG	4 cut(s)	2061, 2199, 2514, 2863
BfmI	CTRYAG	5 cut(s)	1419, 1737, 2010, 2448, 2529
BfoI	RGCGCY	1 cut(s)	542
BfuAI	ACCTGC	2 cut(s)	2420, 2594
BglII	AGATCT	1 cut(s)	1741
BlpI	GCTNAGC	4 cut(s)	1080, 1278, 1860, 2663
BmcAI	AGTACT	1 cut(s)	2518
Bme1390I	CCNGG	2 cut(s)	47, 624
Bme18I	GGWCC	2 cut(s)	1117, 2762
BmeT110I	CYCGRG	1 cut(s)	1694
BmgBI	CACGTC	1 cut(s)	2267
BmgT120I	GGNCC	2 cut(s)	1117, 2762
BmiI	GGNNCC	7 cut(s)	43, 637, 1119, 1989, 2043, 2472, 2763
BmrFI	CCNGG	2 cut(s)	47, 624
BmrI	ACTGGG	1 cut(s)	1578
BmuI	ACTGGG	1 cut(s)	1578
BpiI	GAAGAC	2 cut(s)	1943, 2166
BpmI	CTGGAG	6 cut(s)	645, 1362, 1730, 1989, 2292, 2463
Bpu10I	CCTNAGC	2 cut(s)	1392, 1590
Bpu1102I	GCTNAGC	4 cut(s)	1080, 1278, 1860, 2663
Bpu14I	TTCGAA	1 cut(s)	2252
BpuEI	CTTGAG	3 cut(s)	966, 976, 2718
BsaAI	YACGTR	2 cut(s)	226, 2416
BsaBI	GATNNNNATC	2 cut(s)	618, 1061
BsaHI	GRCGYC	1 cut(s)	246
BsaJI	CCNNGG	6 cut(s)	36, 45, 46, 66, 111, 2394
BsaWI	WCCGGW	2 cut(s)	597, 2038
BsaXI	ACNNNNNCTCC	6 cut(s)	233, 263, 725, 755, 1335, 1365
Bsc4I	CCNNNNNNNGG	4 cut(s)	24, 67, 112, 2548
Bse118I	RCCGGY	1 cut(s)	311
Bse1I	ACTGG	5 cut(s)	1090, 1573, 1894, 1989, 2328
Bse3DI	GCAATG	2 cut(s)	819, 2084
Bse8I	GATNNNNATC	2 cut(s)	618, 1061
BseAI	TCCGGA	1 cut(s)	597
BseBI	CCWGG	2 cut(s)	47, 624
BseDI	CCNNGG	6 cut(s)	36, 45, 46, 66, 111, 2394
BseGI	GGATG	9 cut(s)	180, 210, 261, 360, 378, 949, 1414, 2018, 2797
BseJI	GATNNNNATC	2 cut(s)	618, 1061
BseLI	CCNNNNNNNGG	4 cut(s)	24, 67, 112, 2548
BseMI	GCAATG	2 cut(s)	819, 2084
BseMII	CTCAG	7 cut(s)	1071, 1269, 1383, 1581, 1866, 1874, 2677
BseNI	ACTGG	5 cut(s)	1090, 1573, 1894, 1989, 2328
BseSI	GKGCMC	2 cut(s)	650, 2437
BsgI	GTGCAG	1 cut(s)	2619
Bsh1236I	CGCG	1 cut(s)	425
BshFI	GGCC	7 cut(s)	60, 116, 240, 1964, 2161, 2327, 2399
BshNI	GGYRCC	2 cut(s)	1987, 2041
BsiHKAI	GWGCWC	3 cut(s)	33, 1861, 2437
BsiHKCI	CYCGRG	1 cut(s)	1694
BsiSI	CCGG	3 cut(s)	312, 598, 2039
BslI	CCNNNNNNNGG	4 cut(s)	24, 67, 112, 2548
BsmAI	GTCTC	3 cut(s)	331, 452, 2060
BsmBI	CGTCTC	1 cut(s)	331
BsnI	GGCC	7 cut(s)	60, 116, 240, 1964, 2161, 2327, 2399
BsoBI	CYCGRG	1 cut(s)	1694
Bsp119I	TTCGAA	1 cut(s)	2252
Bsp1286I	GDGCHC	6 cut(s)	33, 44, 650, 1861, 2437, 2664
Bsp13I	TCCGGA	1 cut(s)	597
Bsp1720I	GCTNAGC	4 cut(s)	1080, 1278, 1860, 2663
Bsp19I	CCATGG	1 cut(s)	36
BspANI	GGCC	7 cut(s)	60, 116, 240, 1964, 2161, 2327, 2399
BspCNI	CTCAG	7 cut(s)	1072, 1270, 1384, 1582, 1867, 1873, 2676
BspEI	TCCGGA	1 cut(s)	597
BspFNI	CGCG	1 cut(s)	425
BspLI	GGNNCC	7 cut(s)	43, 637, 1119, 1989, 2043, 2472, 2763
BspMAI	CTGCAG	2 cut(s)	1423, 2014
BspMI	ACCTGC	2 cut(s)	2420, 2594
BspPI	GGATC	4 cut(s)	102, 614, 2116, 2528
BspT104I	TTCGAA	1 cut(s)	2252
BspT107I	GGYRCC	2 cut(s)	1987, 2041
BsrBI	CCGCTC	2 cut(s)	736, 825
BsrDI	GCAATG	2 cut(s)	819, 2084
BsrFI	RCCGGY	1 cut(s)	311
BsrI	ACTGG	5 cut(s)	1090, 1573, 1894, 1989, 2328
BssAI	RCCGGY	1 cut(s)	311
BssECI	CCNNGG	6 cut(s)	36, 45, 46, 66, 111, 2394
BssNAI	GTATAC	1 cut(s)	855
BssNI	GRCGYC	1 cut(s)	246
BssSI	CACGAG	2 cut(s)	140, 892
BssT1I	CCWWGG	4 cut(s)	36, 66, 111, 2394
Bst1107I	GTATAC	1 cut(s)	855
Bst2BI	CACGAG	2 cut(s)	140, 892
Bst2UI	CCWGG	2 cut(s)	47, 624
Bst4CI	ACNGT	9 cut(s)	463, 859, 1013, 1155, 1615, 1949, 2138, 2441, 2449
Bst6I	CTCTTC	4 cut(s)	114, 338, 998, 2357
BstACI	GRCGYC	1 cut(s)	246
BstAPI	GCANNNNNTGC	3 cut(s)	2432, 2606, 2648
BstBAI	YACGTR	2 cut(s)	226, 2416
BstBI	TTCGAA	1 cut(s)	2252
BstC8I	GCNNGC	6 cut(s)	33, 498, 837, 1275, 1755, 1770
BstDSI	CCRYGG	1 cut(s)	36
BstF5I	GGATG	9 cut(s)	180, 210, 261, 360, 378, 949, 1414, 2018, 2797
BstFNI	CGCG	1 cut(s)	425
BstH2I	RGCGCY	1 cut(s)	542
BstHHI	GCGC	6 cut(s)	427, 502, 541, 778, 1464, 1887
BstMAI	GTCTC	3 cut(s)	331, 452, 2060
BstNI	CCWGG	2 cut(s)	47, 624
BstNSI	RCATGY	1 cut(s)	1340
BstSCI	CCNGG	2 cut(s)	45, 622
BstSFI	CTRYAG	5 cut(s)	1419, 1737, 2010, 2448, 2529
BstSLI	GKGCMC	2 cut(s)	650, 2437
BstSNI	TACGTA	1 cut(s)	226
BstUI	CGCG	1 cut(s)	425
BstV2I	GAAGAC	2 cut(s)	1943, 2166
BstX2I	RGATCY	2 cut(s)	1741, 2533
BstXI	CCANNNNNNTGG	1 cut(s)	1984
BstYI	RGATCY	2 cut(s)	1741, 2533
BstZ17I	GTATAC	1 cut(s)	855
BsuRI	GGCC	7 cut(s)	60, 116, 240, 1964, 2161, 2327, 2399
BtgI	CCRYGG	1 cut(s)	36
BtrI	CACGTC	1 cut(s)	2267
BtsCI	GGATG	9 cut(s)	180, 210, 261, 360, 378, 949, 1414, 2018, 2797
BtsI	GCAGTG	1 cut(s)	2677
BtsIMutI	CAGTG	8 cut(s)	871, 1566, 1887, 1982, 2445, 2446, 2503, 2677
BveI	ACCTGC	2 cut(s)	2420, 2594
Cac8I	GCNNGC	6 cut(s)	33, 498, 837, 1275, 1755, 1770
CfoI	GCGC	6 cut(s)	427, 502, 541, 778, 1464, 1887
Cfr10I	RCCGGY	1 cut(s)	311
Cfr13I	GGNCC	2 cut(s)	1117, 2762
CseI	GACGC	1 cut(s)	254
Csp6I	GTAC	3 cut(s)	205, 2247, 2517
CviAII	CATG	9 cut(s)	37, 535, 631, 1204, 1216, 1318, 1337, 1793, 2587
CviQI	GTAC	3 cut(s)	205, 2247, 2517
DraI	TTTAAA	1 cut(s)	2848
DraIII	CACNNNGTG	2 cut(s)	645, 2441
DrdI	GACNNNNNNGTC	1 cut(s)	296
DseDI	GACNNNNNNGTC	1 cut(s)	296
EaeI	YGGCCR	3 cut(s)	58, 238, 2325
Eam1104I	CTCTTC	4 cut(s)	114, 338, 998, 2357
EarI	CTCTTC	4 cut(s)	114, 338, 998, 2357
EciI	GGCGGA	1 cut(s)	203
Ecl136II	GAGCTC	1 cut(s)	31
Eco105I	TACGTA	1 cut(s)	226
Eco130I	CCWWGG	4 cut(s)	36, 66, 111, 2394
Eco147I	AGGCCT	2 cut(s)	1964, 2161
Eco24I	GRGCYC	3 cut(s)	33, 44, 2664
Eco47I	GGWCC	2 cut(s)	1117, 2762
Eco53kI	GAGCTC	1 cut(s)	31
Eco57I	CTGAAG	4 cut(s)	1484, 1953, 2479, 2592
Eco88I	CYCGRG	1 cut(s)	1694
EcoICRI	GAGCTC	1 cut(s)	31
EcoO109I	RGGNCCY	2 cut(s)	1117, 2762
EcoRII	CCWGG	2 cut(s)	45, 622
EcoT14I	CCWWGG	4 cut(s)	36, 66, 111, 2394
EcoT22I	ATGCAT	1 cut(s)	1657
EcoT38I	GRGCYC	3 cut(s)	33, 44, 2664
ErhI	CCWWGG	4 cut(s)	36, 66, 111, 2394
Esp3I	CGTCTC	1 cut(s)	331
FaeI	CATG	9 cut(s)	40, 538, 634, 1207, 1219, 1321, 1340, 1796, 2590
FalI	AAGNNNNNCTT	3 cut(s)	2544, 2576, 2841
FatI	CATG	9 cut(s)	36, 534, 630, 1203, 1215, 1317, 1336, 1792, 2586
FauI	CCCGC	3 cut(s)	18, 475, 818
FauNDI	CATATG	2 cut(s)	1624, 1759
FbaI	TGATCA	2 cut(s)	1056, 2563
FblI	GTMKAC	3 cut(s)	222, 854, 1051
FokI	GGATG	9 cut(s)	167, 197, 248, 347, 365, 936, 1421, 2005, 2804
FriOI	GRGCYC	3 cut(s)	33, 44, 2664
FspBI	CTAG	4 cut(s)	2061, 2199, 2514, 2863
FspI	TGCGCA	1 cut(s)	1463
GlaI	GCGC	6 cut(s)	426, 501, 540, 777, 1463, 1886
GsuI	CTGGAG	6 cut(s)	645, 1362, 1730, 1989, 2292, 2463
HaeII	RGCGCY	1 cut(s)	542
HaeIII	GGCC	7 cut(s)	60, 116, 240, 1964, 2161, 2327, 2399
HapII	CCGG	3 cut(s)	312, 598, 2039
HgaI	GACGC	1 cut(s)	254
HhaI	GCGC	6 cut(s)	427, 502, 541, 778, 1464, 1887
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	9 cut(s)	40, 538, 634, 1207, 1219, 1321, 1340, 1796, 2590
Hin6I	GCGC	6 cut(s)	425, 500, 539, 776, 1462, 1885
HinP1I	GCGC	6 cut(s)	425, 500, 539, 776, 1462, 1885
HincII	GTYRAC	4 cut(s)	373, 1052, 1198, 2818
HindII	GTYRAC	4 cut(s)	373, 1052, 1198, 2818
HindIII	AAGCTT	1 cut(s)	1481
HinfI	GANTC	7 cut(s)	280, 627, 887, 955, 1451, 2279, 2777
HpaI	GTTAAC	1 cut(s)	2818
HpaII	CCGG	3 cut(s)	312, 598, 2039
HphI	GGTGA	2 cut(s)	1201, 1363
Hpy166II	GTNNAC	8 cut(s)	223, 373, 855, 1052, 1198, 2333, 2435, 2818
Hpy8I	GTNNAC	8 cut(s)	223, 373, 855, 1052, 1198, 2333, 2435, 2818
Hpy99I	CGWCG	7 cut(s)	248, 290, 347, 416, 458, 571, 574
HpyAV	CCTTC	6 cut(s)	193, 262, 502, 520, 2416, 2546
HpyCH4III	ACNGT	9 cut(s)	463, 859, 1013, 1155, 1615, 1949, 2138, 2441, 2449
HpyCH4IV	ACGT	4 cut(s)	225, 752, 2266, 2415
HpySE526I	ACGT	4 cut(s)	225, 752, 2266, 2415
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	9 cut(s)	40, 538, 634, 1207, 1219, 1321, 1340, 1796, 2590
HspAI	GCGC	6 cut(s)	425, 500, 539, 776, 1462, 1885
Kpn2I	TCCGGA	1 cut(s)	597
Ksp22I	TGATCA	2 cut(s)	1056, 2563
KspAI	GTTAAC	1 cut(s)	2818
LmnI	GCTCC	9 cut(s)	4, 28, 47, 490, 635, 733, 822, 1270, 1294
MaeI	CTAG	4 cut(s)	2061, 2199, 2514, 2863
MaeII	ACGT	4 cut(s)	225, 752, 2266, 2415
MaeIII	GTNAC	9 cut(s)	866, 1007, 1211, 1630, 1943, 2224, 2441, 2509, 2745
MbiI	CCGCTC	2 cut(s)	736, 825
MfeI	CAATTG	1 cut(s)	2750
MflI	RGATCY	2 cut(s)	1741, 2533
MhlI	GDGCHC	6 cut(s)	33, 44, 650, 1861, 2437, 2664
MlsI	TGGCCA	1 cut(s)	2327
MluNI	TGGCCA	1 cut(s)	2327
MlyI	GAGTC	2 cut(s)	274, 636
MmeI	TCCRAC	1 cut(s)	2529
Mox20I	TGGCCA	1 cut(s)	2327
Mph1103I	ATGCAT	1 cut(s)	1657
MroI	TCCGGA	1 cut(s)	597
MroXI	GAANNNNTTC	3 cut(s)	1549, 2034, 2556
MscI	TGGCCA	1 cut(s)	2327
MseI	TTAA	9 cut(s)	876, 1227, 1359, 1433, 1898, 2121, 2694, 2817, 2847
MslI	CAYNNNNRTG	3 cut(s)	1261, 1892, 2450
Msp20I	TGGCCA	1 cut(s)	2327
MspA1I	CMGCKG	2 cut(s)	1670, 2009
MspI	CCGG	3 cut(s)	312, 598, 2039
MspR9I	CCNGG	2 cut(s)	47, 624
MunI	CAATTG	1 cut(s)	2750
MvaI	CCWGG	2 cut(s)	47, 624
MvnI	CGCG	1 cut(s)	425
NcoI	CCATGG	1 cut(s)	36
NdeI	CATATG	2 cut(s)	1624, 1759
NlaIII	CATG	9 cut(s)	40, 538, 634, 1207, 1219, 1321, 1340, 1796, 2590
NlaIV	GGNNCC	7 cut(s)	43, 637, 1119, 1989, 2043, 2472, 2763
NmeAIII	GCCGAG	2 cut(s)	196, 216
NmuCI	GTSAC	5 cut(s)	866, 1007, 1943, 2441, 2745
NsbI	TGCGCA	1 cut(s)	1463
NsiI	ATGCAT	1 cut(s)	1657
NspI	RCATGY	1 cut(s)	1340
NspV	TTCGAA	1 cut(s)	2252
OliI	CACNNNNGTG	1 cut(s)	2450
PaqCI	CACCTGC	2 cut(s)	2420, 2594
PasI	CCCWGGG	1 cut(s)	46
PceI	AGGCCT	2 cut(s)	1964, 2161
PcsI	WCGNNNNNNNCGW	4 cut(s)	138, 294, 348, 647
PdmI	GAANNNNTTC	3 cut(s)	1549, 2034, 2556
PfeI	GAWTC	5 cut(s)	887, 955, 1451, 2279, 2777
PflFI	GACNNNGTC	2 cut(s)	83, 1171
PflMI	CCANNNNNTGG	1 cut(s)	2548
PfoI	TCCNGGA	1 cut(s)	622
PleI	GAGTC	2 cut(s)	274, 635
PpsI	GAGTC	2 cut(s)	274, 635
Ppu21I	YACGTR	2 cut(s)	226, 2416
PpuMI	RGGWCCY	2 cut(s)	1117, 2762
PshBI	ATTAAT	1 cut(s)	1227
PsiI	TTATAA	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	33
Psp5II	RGGWCCY	2 cut(s)	1117, 2762
Psp6I	CCWGG	2 cut(s)	45, 622
PspGI	CCWGG	2 cut(s)	45, 622
PspN4I	GGNNCC	7 cut(s)	43, 637, 1119, 1989, 2043, 2472, 2763
PspPI	GGNCC	2 cut(s)	1117, 2762
PspPPI	RGGWCCY	2 cut(s)	1117, 2762
PsrI	GAACNNNNNNTAC	2 cut(s)	2109, 2141
PstI	CTGCAG	2 cut(s)	1423, 2014
PsuI	RGATCY	2 cut(s)	1741, 2533
PsyI	GACNNNGTC	2 cut(s)	83, 1171
PvuII	CAGCTG	2 cut(s)	1670, 2009
RsaI	GTAC	3 cut(s)	206, 2248, 2518
RsaNI	GTAC	3 cut(s)	205, 2247, 2517
RseI	CAYNNNNRTG	3 cut(s)	1261, 1892, 2450
SacI	GAGCTC	1 cut(s)	33
SalI	GTCGAC	1 cut(s)	1050
SaqAI	TTAA	9 cut(s)	876, 1227, 1359, 1433, 1898, 2121, 2694, 2817, 2847
Sau96I	GGNCC	2 cut(s)	1117, 2762
ScaI	AGTACT	1 cut(s)	2518
SchI	GAGTC	2 cut(s)	274, 636
ScrFI	CCNGG	2 cut(s)	47, 624
SduI	GDGCHC	6 cut(s)	33, 44, 650, 1861, 2437, 2664
SfcI	CTRYAG	5 cut(s)	1419, 1737, 2010, 2448, 2529
SfuI	TTCGAA	1 cut(s)	2252
SinI	GGWCC	2 cut(s)	1117, 2762
SmiMI	CAYNNNNRTG	3 cut(s)	1261, 1892, 2450
SmlI	CTYRAG	4 cut(s)	11, 981, 991, 2733
SmoI	CTYRAG	4 cut(s)	11, 981, 991, 2733
SnaBI	TACGTA	1 cut(s)	226
SpeI	ACTAGT	1 cut(s)	2513
SseBI	AGGCCT	2 cut(s)	1964, 2161
SspMI	CTAG	4 cut(s)	2061, 2199, 2514, 2863
SstI	GAGCTC	1 cut(s)	33
StuI	AGGCCT	2 cut(s)	1964, 2161
StyD4I	CCNGG	2 cut(s)	45, 622
StyI	CCWWGG	4 cut(s)	36, 66, 111, 2394
TaaI	ACNGT	9 cut(s)	463, 859, 1013, 1155, 1615, 1949, 2138, 2441, 2449
TaiI	ACGT	4 cut(s)	228, 755, 2269, 2418
TaqI	TCGA	6 cut(s)	78, 147, 590, 1051, 1261, 2252
TatI	WGTACW	1 cut(s)	2516
TauI	GCSGC	4 cut(s)	54, 165, 607, 2402
TfiI	GAWTC	5 cut(s)	887, 955, 1451, 2279, 2777
Tru1I	TTAA	9 cut(s)	876, 1227, 1359, 1433, 1898, 2121, 2694, 2817, 2847
Tru9I	TTAA	9 cut(s)	876, 1227, 1359, 1433, 1898, 2121, 2694, 2817, 2847
TscAI	CASTG	8 cut(s)	871, 1573, 1894, 1989, 2446, 2452, 2503, 2677
TseFI	GTSAC	5 cut(s)	866, 1007, 1943, 2441, 2745
Tsp45I	GTSAC	5 cut(s)	866, 1007, 1943, 2441, 2745
TspGWI	ACGGA	1 cut(s)	1476
TspRI	CASTG	8 cut(s)	871, 1573, 1894, 1989, 2446, 2452, 2503, 2677
Tth111I	GACNNNGTC	2 cut(s)	83, 1171
Van91I	CCANNNNNTGG	1 cut(s)	2548
VneI	GTGCAC	1 cut(s)	2433
VpaK11BI	GGWCC	2 cut(s)	1117, 2762
VspI	ATTAAT	1 cut(s)	1227
XapI	RAATTY	3 cut(s)	592, 2301, 2690
XceI	RCATGY	1 cut(s)	1340
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1299
XmiI	GTMKAC	3 cut(s)	222, 854, 1051
XmnI	GAANNNNTTC	3 cut(s)	1549, 2034, 2556
XspI	CTAG	4 cut(s)	2061, 2199, 2514, 2863
ZrmI	AGTACT	1 cut(s)	2518
Zsp2I	ATGCAT	1 cut(s)	1657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.