Rh7AG297900

AP-4 complex subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
32562312 .. 32562644
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG297900.1

Sequence Viewer

Length: 333 bp
ATGGGATTATATGCAGACACTCCTGTCAGTGGGTTCAGCAGCAGTGTTGGGAACCCTGTGTTGACTAATAGGGATGACTTTGCATCTGAGTTATCAAATGATACAAGGACTTCTCAAGTTGGGGTATCACAATCGAATAAGGGTCCTAACCGTAAAGATTCATTTGAAAAGGATGCACTTGTAAGGCAGATGGGCGTTACCCCCACAAGTCAGAACCCCAACTTGTTTAGAGATTTGCTTGGCTGGAACTGTTTGTTTGGCAGATTTAAAATCAAAATGTTCGAGATTATTCAGTTAGTCATGCATGGTCTTTCGGAGTGGCTGGTTATATGA

Protein Analysis

110

Amino Acids

12.26

Weight (kDa)

6.55

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 23
AfiI CCNNNNNNNGG 1 cut(s) 29
AgsI TTSAA 1 cut(s) 167
ApeKI GCWGC 1 cut(s) 39
AspS9I GGNCC 1 cut(s) 143
AvaII GGWCC 1 cut(s) 143
BbvI GCAGC 1 cut(s) 51
BccI CCATC 1 cut(s) 184
BisI GCNGC 1 cut(s) 40
BlsI GCNGC 1 cut(s) 41
Bme18I GGWCC 1 cut(s) 143
BmgT120I GGNCC 1 cut(s) 143
BmiI GGNNCC 2 cut(s) 53, 144
BmsI GCATC 2 cut(s) 92, 163
BpuEI CTTGAG 1 cut(s) 99
Bsc4I CCNNNNNNNGG 1 cut(s) 29
BseGI GGATG 2 cut(s) 79, 178
BseLI CCNNNNNNNGG 1 cut(s) 29
BseMII CTCAG 1 cut(s) 78
BseXI GCAGC 1 cut(s) 51
BslI CCNNNNNNNGG 1 cut(s) 29
BspCNI CTCAG 1 cut(s) 79
BspLI GGNNCC 2 cut(s) 53, 144
Bst4CI ACNGT 2 cut(s) 152, 251
BstDEI CTNAG 1 cut(s) 87
BstF5I GGATG 2 cut(s) 79, 178
BstV1I GCAGC 1 cut(s) 51
BtsCI GGATG 2 cut(s) 79, 178
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 2 cut(s) 34, 49
Cfr13I GGNCC 1 cut(s) 143
CviAII CATG 2 cut(s) 301, 305
CviJI RGCY 2 cut(s) 243, 322
CviKI_1 RGCY 2 cut(s) 243, 322
DdeI CTNAG 1 cut(s) 87
DraI TTTAAA 1 cut(s) 268
DrdI GACNNNNNNGTC 1 cut(s) 23
DseDI GACNNNNNNGTC 1 cut(s) 23
Eco47I GGWCC 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 143
EcoT22I ATGCAT 1 cut(s) 306
FaeI CATG 2 cut(s) 304, 308
FaiI YATR 6 cut(s) 10, 12, 302, 306, 329, 331
FatI CATG 2 cut(s) 300, 304
Fnu4HI GCNGC 1 cut(s) 40
FokI GGATG 2 cut(s) 86, 185
Fsp4HI GCNGC 1 cut(s) 40
GluI GCNGC 1 cut(s) 40
Hin1II CATG 2 cut(s) 304, 308
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HinfI GANTC 1 cut(s) 158
Hpy166II GTNNAC 1 cut(s) 63
Hpy188I TCNGA 3 cut(s) 88, 213, 316
Hpy188III TCNNGA 1 cut(s) 283
Hpy8I GTNNAC 1 cut(s) 63
HpyCH4III ACNGT 2 cut(s) 152, 251
HpyCH4V TGCA 4 cut(s) 14, 83, 176, 304
HpyF3I CTNAG 1 cut(s) 87
Hsp92II CATG 2 cut(s) 304, 308
LpnPI CCDG 4 cut(s) 36, 69, 229, 308
Lsp1109I GCAGC 1 cut(s) 51
LweI GCATC 2 cut(s) 92, 163
MaeIII GTNAC 1 cut(s) 196
Mph1103I ATGCAT 1 cut(s) 306
MseI TTAA 1 cut(s) 267
NlaIII CATG 2 cut(s) 304, 308
NlaIV GGNNCC 2 cut(s) 53, 144
NsiI ATGCAT 1 cut(s) 306
PfeI GAWTC 1 cut(s) 158
PkrI GCNGC 1 cut(s) 41
PpuMI RGGWCCY 1 cut(s) 143
Psp5II RGGWCCY 1 cut(s) 143
PspN4I GGNNCC 2 cut(s) 53, 144
PspPI GGNCC 1 cut(s) 143
PspPPI RGGWCCY 1 cut(s) 143
SaqAI TTAA 1 cut(s) 267
SatI GCNGC 1 cut(s) 40
Sau96I GGNCC 1 cut(s) 143
SfaNI GCATC 2 cut(s) 92, 163
SinI GGWCC 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 114
SmoI CTYRAG 1 cut(s) 114
TaaI ACNGT 2 cut(s) 152, 251
TaqI TCGA 2 cut(s) 134, 282
TfiI GAWTC 1 cut(s) 158
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TscAI CASTG 2 cut(s) 34, 49
TseI GCWGC 1 cut(s) 39
TspDTI ATGAA 1 cut(s) 150
TspRI CASTG 2 cut(s) 34, 49
VpaK11BI GGWCC 1 cut(s) 143
Zsp2I ATGCAT 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.