pycom02g22910

AP-4 complex subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
21048545 .. 21049516
972 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22910.1

Sequence Viewer

Length: 972 bp
ATGTCAGCAACTTCGGAAACCAAGATCGACCATGAAGCTTTAACCCATAGTCTTAGGTTTGAGGCGTATGATCTTCCAAAGCCAGTAGTGTCATCAAGAGTTCCCCCAGCTGCAGTTGCTTCCTCAACTGAGCTTGTTCCAGTGCCAGAACCATCTTATGCGAGGGAGATCCGCCAACCTGCATCATCGCCATCTGTCTCAGATGCAGGATCGTCGGAACTTAAGCTACGACTTGATGGTGTACAAAAAAAATGGGGCAGACCAACATACTCCTCTTCTGCATCACCGAGCTCGAACTCTTCAAGTTCTACTTCCCACAACACAACGAATGGGGTCACACAAGTAGATAGCGTGGGCACTTCAAATTCAAAAGCATGTGACACTTATGATTCAAAGCGGCCACAGGTTGAGATTTCTGAAGAAAAGCAGAAGCTTGCCTCTTCTCTGTTTGGAGGCTCATCAAAAACCGAGAAGAGGCCATCTTCTACCAACCATAAGGCGTCTAAGGTGGGTAGCCATGCTTCAGAGAAGTCCCAGGCGCCAAAGGCTGCAGTTGTACACACTGAAATTATTCATGAACCTGCTCCAGACTTGCTCGACTTGGGTGACTCAACTAGTTCTGCTCCGTCTGTAGATCCTTTTAAGCAGTTAGAAGGGCTTCTTGATCAAACTGACGTTGCGTCAAATGTGAATCATGGTACAGCAAAGACACCTGATTTTATGGGATTATATGCGGATACATCTGTCAGTGGGCTCAGTAGCAGTGTTGGGGATCTTTTGCCGACCAACAGGGATGAGTTTAATCTTACATCTGAGTTATCAAGTGCTACAAGGACTGCTCAAGGTGGGGTAACACAGATTAATAAGGGTCCTAACCCTAAAGATGCCTTGGAAAAGGATTCACGTGTAAGGCAGATGGGTGTGACACCAACAAGGCCGAATCCCAACTTGTTTCGAGATCTGCTTGGCTAA

Protein Analysis

324

Amino Acids

34.17

Weight (kDa)

6.08

Isoelectric Point (pI)

55.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 187, 589
AccB1I GGYRCC 1 cut(s) 538
AciI CCGC 3 cut(s) 172, 397, 734
AclWI GGATC 4 cut(s) 163, 217, 629, 780
AcoI YGGCCR 1 cut(s) 398
AcsI RAATTY 1 cut(s) 364
AcuI CTGAAG 2 cut(s) 438, 507
AcvI CACGTG 1 cut(s) 905
AcyI GRCGYC 2 cut(s) 500, 539
AfaI GTAC 3 cut(s) 243, 558, 700
AfiI CCNNNNNNNGG 1 cut(s) 474
AflII CTTAAG 1 cut(s) 221
AflIII ACRYGT 1 cut(s) 904
AgsI TTSAA 4 cut(s) 303, 363, 369, 393
AhdI GACNNNNNGTC 1 cut(s) 679
AhlI ACTAGT 1 cut(s) 614
AjnI CCWGG 1 cut(s) 534
AluBI AGCT 6 cut(s) 38, 110, 133, 226, 291, 433
AluI AGCT 6 cut(s) 38, 110, 133, 226, 291, 433
Alw21I GWGCWC 1 cut(s) 293
Alw26I GTCTC 1 cut(s) 202
AlwI GGATC 4 cut(s) 163, 217, 629, 780
AoxI GGCC 3 cut(s) 398, 476, 935
ApeKI GCWGC 2 cut(s) 110, 548
ApoI RAATTY 1 cut(s) 364
AseI ATTAAT 1 cut(s) 861
Asp700I GAANNNNTTC 2 cut(s) 570, 657
AspLEI GCGC 1 cut(s) 541
AspS9I GGNCC 1 cut(s) 869
AsuHPI GGTGA 2 cut(s) 276, 617
AvaII GGWCC 1 cut(s) 869
BaeGI GKGCMC 1 cut(s) 359
BaeI ACNNNNGTAYC 2 cut(s) 729, 762
BanI GGYRCC 1 cut(s) 538
BanII GRGCYC 2 cut(s) 293, 756
BarI GAAGNNNNNNTAC 2 cut(s) 505, 537
BbrPI CACGTG 1 cut(s) 905
Bbv12I GWGCWC 1 cut(s) 293
BbvI GCAGC 2 cut(s) 97, 535
BccI CCATC 5 cut(s) 160, 199, 230, 487, 910
BcgI CGANNNNNNTGC 2 cut(s) 195, 229
BciT130I CCWGG 1 cut(s) 536
BciVI GTATCC 1 cut(s) 730
BclI TGATCA 1 cut(s) 664
BcoDI GTCTC 1 cut(s) 202
BcuI ACTAGT 1 cut(s) 614
BfaI CTAG 1 cut(s) 615
BfmI CTRYAG 3 cut(s) 111, 549, 630
BfoI RGCGCY 1 cut(s) 542
BfrI CTTAAG 1 cut(s) 221
BfuAI ACCTGC 2 cut(s) 187, 589
BfuI GTATCC 1 cut(s) 730
BglII AGATCT 1 cut(s) 958
BisI GCNGC 3 cut(s) 111, 398, 549
BlsI GCNGC 3 cut(s) 112, 399, 550
Bme1390I CCNGG 1 cut(s) 536
Bme18I GGWCC 1 cut(s) 869
BmeRI GACNNNNNGTC 1 cut(s) 679
BmgT120I GGNCC 1 cut(s) 869
BmiI GGNNCC 2 cut(s) 540, 870
BmrFI CCNGG 1 cut(s) 536
BmsI GCATC 4 cut(s) 191, 193, 290, 874
BpmI CTGGAG 1 cut(s) 570
BpuEI CTTGAG 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 905
BsaHI GRCGYC 2 cut(s) 500, 539
BsaJI CCNNGG 2 cut(s) 534, 888
Bsc4I CCNNNNNNNGG 1 cut(s) 474
Bse1I ACTGG 2 cut(s) 83, 140
BseBI CCWGG 1 cut(s) 536
BseDI CCNNGG 2 cut(s) 534, 888
BseGI GGATG 1 cut(s) 799
BseLI CCNNNNNNNGG 1 cut(s) 474
BseMII CTCAG 4 cut(s) 120, 213, 769, 804
BseNI ACTGG 2 cut(s) 83, 140
BseRI GAGGAG 1 cut(s) 262
BseSI GKGCMC 1 cut(s) 359
BseXI GCAGC 2 cut(s) 97, 535
BseYI CCCAGC 1 cut(s) 106
BshFI GGCC 3 cut(s) 400, 478, 937
BshNI GGYRCC 1 cut(s) 538
BsiHKAI GWGCWC 1 cut(s) 293
BslFI GGGAC 1 cut(s) 517
BslI CCNNNNNNNGG 1 cut(s) 474
BsmAI GTCTC 1 cut(s) 202
BsmFI GGGAC 1 cut(s) 517
BsnI GGCC 3 cut(s) 400, 478, 937
Bsp1286I GDGCHC 3 cut(s) 293, 359, 756
Bsp1407I TGTACA 2 cut(s) 241, 556
Bsp143I GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
BspACI CCGC 3 cut(s) 172, 397, 734
BspANI GGCC 3 cut(s) 400, 478, 937
BspCNI CTCAG 4 cut(s) 121, 212, 768, 805
BspHI TCATGA 1 cut(s) 574
BspLI GGNNCC 2 cut(s) 540, 870
BspMAI CTGCAG 2 cut(s) 115, 553
BspMI ACCTGC 2 cut(s) 187, 589
BspPI GGATC 4 cut(s) 163, 217, 629, 780
BspT107I GGYRCC 1 cut(s) 538
BspTI CTTAAG 1 cut(s) 221
BsrGI TGTACA 2 cut(s) 241, 556
BsrI ACTGG 2 cut(s) 83, 140
BssECI CCNNGG 2 cut(s) 534, 888
BssMI GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
BssNI GRCGYC 2 cut(s) 500, 539
BssT1I CCWWGG 1 cut(s) 888
Bst2UI CCWGG 1 cut(s) 536
Bst6I CTCTTC 4 cut(s) 280, 304, 445, 467
BstACI GRCGYC 2 cut(s) 500, 539
BstAFI CTTAAG 1 cut(s) 221
BstAUI TGTACA 2 cut(s) 241, 556
BstBAI YACGTR 1 cut(s) 905
BstC8I GCNNGC 1 cut(s) 435
BstDEI CTNAG 6 cut(s) 53, 129, 199, 504, 755, 813
BstF5I GGATG 1 cut(s) 799
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 1 cut(s) 541
BstKTI GATC 8 cut(s) 27, 73, 171, 212, 637, 667, 775, 961
BstMAI GTCTC 1 cut(s) 202
BstMBI GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
BstMWI GCNNNNNNNGC 2 cut(s) 116, 545
BstNI CCWGG 1 cut(s) 536
BstNSI RCATGY 1 cut(s) 378
BstSCI CCNGG 1 cut(s) 534
BstSFI CTRYAG 3 cut(s) 111, 549, 630
BstSLI GKGCMC 1 cut(s) 359
BstV1I GCAGC 2 cut(s) 97, 535
BstX2I RGATCY 4 cut(s) 168, 634, 772, 958
BstYI RGATCY 4 cut(s) 168, 634, 772, 958
BsuI GTATCC 1 cut(s) 730
BsuRI GGCC 3 cut(s) 400, 478, 937
BtgZI GCGATG 1 cut(s) 171
BtsCI GGATG 1 cut(s) 799
BtsI GCAGTG 1 cut(s) 769
BtsIMutI CAGTG 4 cut(s) 147, 561, 754, 769
BveI ACCTGC 2 cut(s) 187, 589
Cac8I GCNNGC 1 cut(s) 435
CciI TCATGA 1 cut(s) 574
CfoI GCGC 1 cut(s) 541
Cfr13I GGNCC 1 cut(s) 869
CseI GACGC 2 cut(s) 489, 669
Csp6I GTAC 3 cut(s) 242, 557, 699
CviAII CATG 5 cut(s) 32, 375, 518, 575, 695
CviQI GTAC 3 cut(s) 242, 557, 699
DdeI CTNAG 6 cut(s) 53, 129, 199, 504, 755, 813
DinI GGCGCC 1 cut(s) 540
DpnI GATC 8 cut(s) 26, 72, 170, 211, 636, 666, 774, 960
DpnII GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
DriI GACNNNNNGTC 1 cut(s) 679
EaeI YGGCCR 1 cut(s) 398
Eam1104I CTCTTC 4 cut(s) 280, 304, 445, 467
Eam1105I GACNNNNNGTC 1 cut(s) 679
EarI CTCTTC 4 cut(s) 280, 304, 445, 467
EciI GGCGGA 1 cut(s) 161
Ecl136II GAGCTC 1 cut(s) 291
Eco130I CCWWGG 1 cut(s) 888
Eco24I GRGCYC 2 cut(s) 293, 756
Eco47I GGWCC 1 cut(s) 869
Eco53kI GAGCTC 1 cut(s) 291
Eco57I CTGAAG 2 cut(s) 438, 507
Eco72I CACGTG 1 cut(s) 905
EcoICRI GAGCTC 1 cut(s) 291
EcoO109I RGGNCCY 1 cut(s) 869
EcoRII CCWGG 1 cut(s) 534
EcoT14I CCWWGG 1 cut(s) 888
EcoT38I GRGCYC 2 cut(s) 293, 756
EgeI GGCGCC 1 cut(s) 540
EheI GGCGCC 1 cut(s) 540
ErhI CCWWGG 1 cut(s) 888
FaeI CATG 5 cut(s) 35, 378, 521, 578, 698
FalI AAGNNNNNCTT 4 cut(s) 295, 327, 645, 677
FaqI GGGAC 1 cut(s) 517
FatI CATG 5 cut(s) 31, 374, 517, 574, 694
FbaI TGATCA 1 cut(s) 664
Fnu4HI GCNGC 3 cut(s) 111, 398, 549
FokI GGATG 1 cut(s) 806
FriOI GRGCYC 2 cut(s) 293, 756
Fsp4HI GCNGC 3 cut(s) 111, 398, 549
FspBI CTAG 1 cut(s) 615
GlaI GCGC 1 cut(s) 540
GluI GCNGC 3 cut(s) 111, 398, 549
GsaI CCCAGC 1 cut(s) 110
GsuI CTGGAG 1 cut(s) 570
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 3 cut(s) 400, 478, 937
HgaI GACGC 2 cut(s) 489, 669
HhaI GCGC 1 cut(s) 541
Hin1I GRCGYC 2 cut(s) 500, 539
Hin1II CATG 5 cut(s) 35, 378, 521, 578, 698
Hin6I GCGC 1 cut(s) 539
HinP1I GCGC 1 cut(s) 539
HindIII AAGCTT 2 cut(s) 36, 431
HinfI GANTC 5 cut(s) 389, 608, 691, 899, 940
HphI GGTGA 2 cut(s) 276, 617
Hpy166II GTNNAC 2 cut(s) 242, 559
Hpy188I TCNGA 6 cut(s) 16, 202, 217, 418, 526, 814
Hpy188III TCNNGA 5 cut(s) 96, 575, 587, 662, 956
Hpy8I GTNNAC 2 cut(s) 242, 559
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 1 cut(s) 647
HpyCH4IV ACGT 2 cut(s) 675, 904
HpyCH4V TGCA 5 cut(s) 113, 182, 206, 281, 551
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 545
HpyF3I CTNAG 6 cut(s) 53, 129, 199, 504, 755, 813
HpySE526I ACGT 2 cut(s) 675, 904
Hsp92I GRCGYC 2 cut(s) 500, 539
Hsp92II CATG 5 cut(s) 35, 378, 521, 578, 698
HspAI GCGC 1 cut(s) 539
KasI GGCGCC 1 cut(s) 538
Ksp22I TGATCA 1 cut(s) 664
Kzo9I GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
LmnI GCTCC 2 cut(s) 589, 628
Lsp1109I GCAGC 2 cut(s) 97, 535
LweI GCATC 4 cut(s) 191, 193, 290, 874
MaeI CTAG 1 cut(s) 615
MaeII ACGT 2 cut(s) 675, 904
MaeIII GTNAC 5 cut(s) 334, 377, 605, 850, 922
MalI GATC 8 cut(s) 26, 72, 170, 211, 636, 666, 774, 960
MboI GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
MboII GAAGA 7 cut(s) 65, 267, 291, 431, 432, 474, 484
MflI RGATCY 4 cut(s) 168, 634, 772, 958
MhlI GDGCHC 3 cut(s) 293, 359, 756
MluCI AATT 2 cut(s) 364, 567
Mly113I GGCGCC 1 cut(s) 539
MlyI GAGTC 1 cut(s) 602
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 7 cut(s) 55, 133, 156, 283, 446, 448, 468
MroXI GAANNNNTTC 2 cut(s) 570, 657
MseI TTAA 5 cut(s) 41, 222, 642, 801, 861
MspA1I CMGCKG 1 cut(s) 110
MspCI CTTAAG 1 cut(s) 221
MspR9I CCNGG 1 cut(s) 536
MvaI CCWGG 1 cut(s) 536
MwoI GCNNNNNNNGC 2 cut(s) 116, 545
NarI GGCGCC 1 cut(s) 539
NdeII GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
NlaIII CATG 5 cut(s) 35, 378, 521, 578, 698
NlaIV GGNNCC 2 cut(s) 540, 870
NmuCI GTSAC 4 cut(s) 334, 377, 605, 922
NspI RCATGY 1 cut(s) 378
PagI TCATGA 1 cut(s) 574
PdmI GAANNNNTTC 2 cut(s) 570, 657
PfeI GAWTC 4 cut(s) 389, 691, 899, 940
PkrI GCNGC 3 cut(s) 112, 399, 550
PleI GAGTC 1 cut(s) 602
PluTI GGCGCC 1 cut(s) 542
PmaCI CACGTG 1 cut(s) 905
PmlI CACGTG 1 cut(s) 905
PpsI GAGTC 1 cut(s) 602
Ppu21I YACGTR 1 cut(s) 905
PpuMI RGGWCCY 1 cut(s) 869
PshBI ATTAAT 1 cut(s) 861
Psp124BI GAGCTC 1 cut(s) 293
Psp5II RGGWCCY 1 cut(s) 869
Psp6I CCWGG 1 cut(s) 534
PspCI CACGTG 1 cut(s) 905
PspFI CCCAGC 1 cut(s) 106
PspGI CCWGG 1 cut(s) 534
PspN4I GGNNCC 2 cut(s) 540, 870
PspPI GGNCC 1 cut(s) 869
PspPPI RGGWCCY 1 cut(s) 869
PsrI GAACNNNNNNTAC 2 cut(s) 210, 242
PstI CTGCAG 2 cut(s) 115, 553
PsuI RGATCY 4 cut(s) 168, 634, 772, 958
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 3 cut(s) 243, 558, 700
RsaNI GTAC 3 cut(s) 242, 557, 699
SacI GAGCTC 1 cut(s) 293
SaqAI TTAA 5 cut(s) 41, 222, 642, 801, 861
SatI GCNGC 3 cut(s) 111, 398, 549
Sau3AI GATC 8 cut(s) 24, 70, 168, 209, 634, 664, 772, 958
Sau96I GGNCC 1 cut(s) 869
SchI GAGTC 1 cut(s) 602
ScrFI CCNGG 1 cut(s) 536
SduI GDGCHC 3 cut(s) 293, 359, 756
SfaNI GCATC 4 cut(s) 191, 193, 290, 874
SfcI CTRYAG 3 cut(s) 111, 549, 630
SfoI GGCGCC 1 cut(s) 540
SinI GGWCC 1 cut(s) 869
SmlI CTYRAG 2 cut(s) 221, 840
SmoI CTYRAG 2 cut(s) 221, 840
SpeI ACTAGT 1 cut(s) 614
Sse9I AATT 2 cut(s) 364, 567
SsiI CCGC 3 cut(s) 172, 397, 734
SspDI GGCGCC 1 cut(s) 538
SspMI CTAG 1 cut(s) 615
SstI GAGCTC 1 cut(s) 293
StyD4I CCNGG 1 cut(s) 534
StyI CCWWGG 1 cut(s) 888
TaiI ACGT 2 cut(s) 678, 907
TaqI TCGA 4 cut(s) 27, 293, 597, 955
TasI AATT 2 cut(s) 364, 567
TatI WGTACW 2 cut(s) 241, 556
TauI GCSGC 1 cut(s) 400
TfiI GAWTC 4 cut(s) 389, 691, 899, 940
Tru1I TTAA 5 cut(s) 41, 222, 642, 801, 861
Tru9I TTAA 5 cut(s) 41, 222, 642, 801, 861
TscAI CASTG 4 cut(s) 147, 568, 754, 769
TseFI GTSAC 4 cut(s) 334, 377, 605, 922
TseI GCWGC 2 cut(s) 110, 548
Tsp45I GTSAC 4 cut(s) 334, 377, 605, 922
TspDTI ATGAA 3 cut(s) 48, 563, 591
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 4 cut(s) 147, 568, 754, 769
Vha464I CTTAAG 1 cut(s) 221
VpaK11BI GGWCC 1 cut(s) 869
VspI ATTAAT 1 cut(s) 861
XapI RAATTY 1 cut(s) 364
XceI RCATGY 1 cut(s) 378
XmnI GAANNNNTTC 2 cut(s) 570, 657
XspI CTAG 1 cut(s) 615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.