WSTF, HB1, Itc1p, MBD9 motif 1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 45, 61, 287 |
| AciI | CCGC | 1 cut(s) | 287 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AgsI | TTSAA | 5 cut(s) | 33, 142, 172, 206, 359 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 208, 240 |
| AluBI | AGCT | 1 cut(s) | 86 |
| AluI | AGCT | 1 cut(s) | 86 |
| Alw26I | GTCTC | 2 cut(s) | 118, 340 |
| AlwI | GGATC | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 3 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 51 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 195 |
| BccI | CCATC | 1 cut(s) | 143 |
| BceAI | ACGGC | 1 cut(s) | 308 |
| BcoDI | GTCTC | 2 cut(s) | 118, 340 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| BmiI | GGNNCC | 2 cut(s) | 254, 332 |
| BmsI | GCATC | 2 cut(s) | 16, 374 |
| BpiI | GAAGAC | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 1 cut(s) | 72 |
| BseMII | CTCAG | 1 cut(s) | 335 |
| Bsh1236I | CGCG | 3 cut(s) | 45, 61, 287 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 2 cut(s) | 118, 340 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 40, 223 |
| Bsp68I | TCGCGA | 2 cut(s) | 45, 61 |
| BspACI | CCGC | 1 cut(s) | 287 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 336 |
| BspFNI | CGCG | 3 cut(s) | 45, 61, 287 |
| BspLI | GGNNCC | 2 cut(s) | 254, 332 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BssMI | GATC | 2 cut(s) | 40, 223 |
| Bst4CI | ACNGT | 1 cut(s) | 263 |
| Bst6I | CTCTTC | 1 cut(s) | 374 |
| BstDEI | CTNAG | 1 cut(s) | 344 |
| BstFNI | CGCG | 3 cut(s) | 45, 61, 287 |
| BstKTI | GATC | 2 cut(s) | 43, 226 |
| BstMAI | GTCTC | 2 cut(s) | 118, 340 |
| BstMBI | GATC | 2 cut(s) | 40, 223 |
| BstUI | CGCG | 3 cut(s) | 45, 61, 287 |
| BstV2I | GAAGAC | 1 cut(s) | 195 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsIMutI | CAGTG | 1 cut(s) | 144 |
| BtuMI | TCGCGA | 2 cut(s) | 45, 61 |
| CseI | GACGC | 1 cut(s) | 293 |
| CviJI | RGCY | 5 cut(s) | 5, 86, 177, 323, 331 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 86, 177, 323, 331 |
| DdeI | CTNAG | 1 cut(s) | 344 |
| DpnI | GATC | 2 cut(s) | 42, 225 |
| DpnII | GATC | 2 cut(s) | 40, 223 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 374 |
| EarI | CTCTTC | 1 cut(s) | 374 |
| FaiI | YATR | 6 cut(s) | 180, 212, 241, 243, 311, 365 |
| FauNDI | CATATG | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| GluI | GCNGC | 1 cut(s) | 288 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 1 cut(s) | 293 |
| HinfI | GANTC | 1 cut(s) | 47 |
| Hpy188I | TCNGA | 1 cut(s) | 345 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 60, 206 |
| HpyAV | CCTTC | 1 cut(s) | 365 |
| HpyCH4III | ACNGT | 1 cut(s) | 263 |
| HpyF3I | CTNAG | 1 cut(s) | 344 |
| Kzo9I | GATC | 2 cut(s) | 40, 223 |
| LmnI | GCTCC | 1 cut(s) | 336 |
| LpnPI | CCDG | 1 cut(s) | 86 |
| LweI | GCATC | 2 cut(s) | 16, 374 |
| MalI | GATC | 2 cut(s) | 42, 225 |
| MboI | GATC | 2 cut(s) | 40, 223 |
| MboII | GAAGA | 3 cut(s) | 200, 228, 297 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 74, 167 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 358 |
| MnlI | CCTC | 1 cut(s) | 266 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 51 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 273 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MvnI | CGCG | 3 cut(s) | 45, 61, 287 |
| NdeI | CATATG | 1 cut(s) | 241 |
| NdeII | GATC | 2 cut(s) | 40, 223 |
| NlaIV | GGNNCC | 2 cut(s) | 254, 332 |
| NruI | TCGCGA | 2 cut(s) | 45, 61 |
| PdmI | GAANNNNTTC | 1 cut(s) | 51 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| PspN4I | GGNNCC | 2 cut(s) | 254, 332 |
| RruI | TCGCGA | 2 cut(s) | 45, 61 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 1 cut(s) | 288 |
| Sau3AI | GATC | 2 cut(s) | 40, 223 |
| SetI | ASST | 3 cut(s) | 88, 161, 340 |
| SfaNI | GCATC | 2 cut(s) | 16, 374 |
| SmlI | CTYRAG | 1 cut(s) | 87 |
| SmoI | CTYRAG | 1 cut(s) | 87 |
| Sse9I | AATT | 2 cut(s) | 74, 167 |
| SsiI | CCGC | 1 cut(s) | 287 |
| SspI | AATATT | 1 cut(s) | 299 |
| TaaI | ACNGT | 1 cut(s) | 263 |
| TaqI | TCGA | 1 cut(s) | 21 |
| TasI | AATT | 2 cut(s) | 74, 167 |
| TauI | GCSGC | 1 cut(s) | 290 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TspDTI | ATGAA | 4 cut(s) | 96, 201, 228, 258 |
| TspRI | CASTG | 1 cut(s) | 151 |
| XmnI | GAANNNNTTC | 1 cut(s) | 51 |