WSTF, HB1, Itc1p, MBD9 motif 1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 358 |
| Acc65I | GGTACC | 1 cut(s) | 123 |
| AccB1I | GGYRCC | 1 cut(s) | 123 |
| AclWI | GGATC | 2 cut(s) | 92, 105 |
| AfaI | GTAC | 2 cut(s) | 125, 314 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 133 |
| AgsI | TTSAA | 4 cut(s) | 80, 225, 257, 323 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 193 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 82, 114 |
| AluBI | AGCT | 1 cut(s) | 51 |
| AluI | AGCT | 1 cut(s) | 51 |
| Alw26I | GTCTC | 2 cut(s) | 180, 213 |
| AlwI | GGATC | 2 cut(s) | 92, 105 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| Asp718I | GGTACC | 1 cut(s) | 123 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| BamHI | GGATCC | 1 cut(s) | 97 |
| BanI | GGYRCC | 1 cut(s) | 123 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 273, 305 |
| BbsI | GAAGAC | 1 cut(s) | 291 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BccI | CCATC | 2 cut(s) | 17, 53 |
| BcoDI | GTCTC | 2 cut(s) | 180, 213 |
| BfaI | CTAG | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 74 |
| BlsI | GCNGC | 1 cut(s) | 75 |
| BmcAI | AGTACT | 1 cut(s) | 314 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 2 cut(s) | 99, 125 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BpiI | GAAGAC | 1 cut(s) | 291 |
| BsaI | GGTCTC | 1 cut(s) | 180 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 54, 84 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 133 |
| Bse1I | ACTGG | 2 cut(s) | 127, 274 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BseNI | ACTGG | 2 cut(s) | 127, 274 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BsgI | GTGCAG | 1 cut(s) | 324 |
| BshNI | GGYRCC | 1 cut(s) | 123 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BsmAI | GTCTC | 2 cut(s) | 180, 213 |
| Bso31I | GGTCTC | 1 cut(s) | 180 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| BspLI | GGNNCC | 2 cut(s) | 99, 125 |
| BspPI | GGATC | 2 cut(s) | 92, 105 |
| BspQI | GCTCTTC | 1 cut(s) | 175 |
| BspT107I | GGYRCC | 1 cut(s) | 123 |
| BspTNI | GGTCTC | 1 cut(s) | 180 |
| BsrI | ACTGG | 2 cut(s) | 127, 274 |
| BssMI | GATC | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 1 cut(s) | 317 |
| Bst6I | CTCTTC | 2 cut(s) | 175, 303 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMAI | GTCTC | 2 cut(s) | 180, 213 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 291 |
| BstX2I | RGATCY | 1 cut(s) | 97 |
| BstYI | RGATCY | 1 cut(s) | 97 |
| Csp6I | GTAC | 2 cut(s) | 124, 313 |
| CviJI | RGCY | 1 cut(s) | 51 |
| CviKI_1 | RGCY | 1 cut(s) | 51 |
| CviQI | GTAC | 2 cut(s) | 124, 313 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| DriI | GACNNNNNGTC | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 2 cut(s) | 175, 303 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 193 |
| EarI | CTCTTC | 2 cut(s) | 175, 303 |
| Eco31I | GGTCTC | 1 cut(s) | 180 |
| FaiI | YATR | 9 cut(s) | 7, 9, 11, 54, 132, 194, 290, 346, 358 |
| Fnu4HI | GCNGC | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 1 cut(s) | 74 |
| FspBI | CTAG | 1 cut(s) | 93 |
| GluI | GCNGC | 1 cut(s) | 74 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 1 cut(s) | 331 |
| Hpy188I | TCNGA | 2 cut(s) | 115, 199 |
| Hpy188III | TCNNGA | 3 cut(s) | 80, 231, 323 |
| Hpy8I | GTNNAC | 1 cut(s) | 331 |
| HpyAV | CCTTC | 1 cut(s) | 231 |
| HpyCH4III | ACNGT | 1 cut(s) | 317 |
| HpyCH4V | TGCA | 2 cut(s) | 32, 305 |
| KpnI | GGTACC | 1 cut(s) | 127 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LguI | GCTCTTC | 1 cut(s) | 175 |
| LpnPI | CCDG | 5 cut(s) | 140, 216, 218, 255, 336 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeI | CTAG | 1 cut(s) | 93 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 7 cut(s) | 102, 162, 254, 262, 293, 296, 320 |
| MflI | RGATCY | 1 cut(s) | 97 |
| MnlI | CCTC | 1 cut(s) | 319 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIV | GGNNCC | 2 cut(s) | 99, 125 |
| PciSI | GCTCTTC | 1 cut(s) | 175 |
| PkrI | GCNGC | 1 cut(s) | 75 |
| PsiI | TTATAA | 1 cut(s) | 358 |
| PspN4I | GGNNCC | 2 cut(s) | 99, 125 |
| PsuI | RGATCY | 1 cut(s) | 97 |
| RsaI | GTAC | 2 cut(s) | 125, 314 |
| RsaNI | GTAC | 2 cut(s) | 124, 313 |
| SapI | GCTCTTC | 1 cut(s) | 175 |
| SatI | GCNGC | 1 cut(s) | 74 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| ScaI | AGTACT | 1 cut(s) | 314 |
| SetI | ASST | 4 cut(s) | 53, 192, 330, 355 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| SspMI | CTAG | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 317 |
| TaqI | TCGA | 2 cut(s) | 15, 156 |
| TatI | WGTACW | 1 cut(s) | 312 |
| TseI | GCWGC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 1 cut(s) | 132 |
| XspI | CTAG | 1 cut(s) | 93 |
| ZrmI | AGTACT | 1 cut(s) | 314 |