WSTF, HB1, Itc1p, MBD9 motif 1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 58, 268, 377 |
| AcoI | YGGCCR | 1 cut(s) | 265 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AflIII | ACRYGT | 1 cut(s) | 480 |
| AgsI | TTSAA | 2 cut(s) | 188, 320 |
| AjnI | CCWGG | 1 cut(s) | 332 |
| AluBI | AGCT | 4 cut(s) | 85, 134, 164, 170 |
| AluI | AGCT | 4 cut(s) | 85, 134, 164, 170 |
| Alw21I | GWGCWC | 1 cut(s) | 109 |
| Alw26I | GTCTC | 1 cut(s) | 374 |
| AoxI | GGCC | 2 cut(s) | 265, 330 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| AspS9I | GGNCC | 1 cut(s) | 330 |
| BauI | CACGAG | 1 cut(s) | 459 |
| Bbv12I | GWGCWC | 1 cut(s) | 109 |
| BbvI | GCAGC | 1 cut(s) | 173 |
| BccI | CCATC | 1 cut(s) | 257 |
| BciT130I | CCWGG | 1 cut(s) | 334 |
| BcoDI | GTCTC | 1 cut(s) | 374 |
| BfaI | CTAG | 1 cut(s) | 432 |
| BisI | GCNGC | 2 cut(s) | 162, 268 |
| BlsI | GCNGC | 2 cut(s) | 163, 269 |
| Bme1390I | CCNGG | 1 cut(s) | 334 |
| BmgT120I | GGNCC | 1 cut(s) | 330 |
| BmiI | GGNNCC | 2 cut(s) | 243, 331 |
| BmrFI | CCNGG | 1 cut(s) | 334 |
| BmsI | GCATC | 2 cut(s) | 279, 328 |
| BpuEI | CTTGAG | 2 cut(s) | 38, 150 |
| BsaJI | CCNNGG | 1 cut(s) | 333 |
| BseBI | CCWGG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 1 cut(s) | 333 |
| BseGI | GGATG | 2 cut(s) | 262, 343 |
| BseRI | GAGGAG | 2 cut(s) | 41, 99 |
| BseXI | GCAGC | 1 cut(s) | 173 |
| BshFI | GGCC | 2 cut(s) | 267, 332 |
| BsiHKAI | GWGCWC | 1 cut(s) | 109 |
| BsmAI | GTCTC | 1 cut(s) | 374 |
| BsnI | GGCC | 2 cut(s) | 267, 332 |
| Bsp1286I | GDGCHC | 1 cut(s) | 109 |
| Bsp1407I | TGTACA | 1 cut(s) | 37 |
| BspACI | CCGC | 3 cut(s) | 58, 268, 377 |
| BspANI | GGCC | 2 cut(s) | 267, 332 |
| BspLI | GGNNCC | 2 cut(s) | 243, 331 |
| BsrGI | TGTACA | 1 cut(s) | 37 |
| BssECI | CCNNGG | 1 cut(s) | 333 |
| BssSI | CACGAG | 1 cut(s) | 459 |
| Bst2BI | CACGAG | 1 cut(s) | 459 |
| Bst2UI | CCWGG | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 3 cut(s) | 407, 442, 454 |
| BstAUI | TGTACA | 1 cut(s) | 37 |
| BstF5I | GGATG | 2 cut(s) | 262, 343 |
| BstMAI | GTCTC | 1 cut(s) | 374 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 64, 167, 338 |
| BstNI | CCWGG | 1 cut(s) | 334 |
| BstNSI | RCATGY | 1 cut(s) | 484 |
| BstSCI | CCNGG | 1 cut(s) | 332 |
| BstV1I | GCAGC | 1 cut(s) | 173 |
| BsuRI | GGCC | 2 cut(s) | 267, 332 |
| BtsCI | GGATG | 2 cut(s) | 262, 343 |
| Cfr13I | GGNCC | 1 cut(s) | 330 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 2 cut(s) | 128, 481 |
| CviJI | RGCY | 7 cut(s) | 85, 134, 164, 170, 244, 267, 332 |
| CviKI_1 | RGCY | 7 cut(s) | 85, 134, 164, 170, 244, 267, 332 |
| CviQI | GTAC | 1 cut(s) | 38 |
| EaeI | YGGCCR | 1 cut(s) | 265 |
| Eco32I | GATATC | 1 cut(s) | 310 |
| EcoO109I | RGGNCCY | 1 cut(s) | 330 |
| EcoRII | CCWGG | 1 cut(s) | 332 |
| EcoRV | GATATC | 1 cut(s) | 310 |
| FaeI | CATG | 2 cut(s) | 131, 484 |
| FaiI | YATR | 5 cut(s) | 129, 200, 219, 372, 482 |
| FatI | CATG | 2 cut(s) | 127, 480 |
| Fnu4HI | GCNGC | 2 cut(s) | 162, 268 |
| FokI | GGATG | 2 cut(s) | 269, 350 |
| Fsp4HI | GCNGC | 2 cut(s) | 162, 268 |
| FspBI | CTAG | 1 cut(s) | 432 |
| GluI | GCNGC | 2 cut(s) | 162, 268 |
| HaeIII | GGCC | 2 cut(s) | 267, 332 |
| Hin1II | CATG | 2 cut(s) | 131, 484 |
| HindIII | AAGCTT | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 2 cut(s) | 320, 461 |
| HpyCH4III | ACNGT | 3 cut(s) | 407, 442, 454 |
| HpyCH4IV | ACGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 3 cut(s) | 67, 95, 341 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 64, 167, 338 |
| HpySE526I | ACGT | 1 cut(s) | 174 |
| Hsp92II | CATG | 2 cut(s) | 131, 484 |
| LmnI | GCTCC | 2 cut(s) | 112, 241 |
| LpnPI | CCDG | 3 cut(s) | 26, 319, 346 |
| Lsp1109I | GCAGC | 1 cut(s) | 173 |
| LweI | GCATC | 2 cut(s) | 279, 328 |
| MaeI | CTAG | 1 cut(s) | 432 |
| MaeII | ACGT | 1 cut(s) | 174 |
| MaeIII | GTNAC | 1 cut(s) | 290 |
| MboII | GAAGA | 4 cut(s) | 317, 368, 402, 485 |
| MfeI | CAATTG | 1 cut(s) | 393 |
| MhlI | GDGCHC | 1 cut(s) | 109 |
| MluCI | AATT | 5 cut(s) | 22, 117, 281, 393, 400 |
| MnlI | CCTC | 4 cut(s) | 62, 120, 187, 468 |
| MseI | TTAA | 5 cut(s) | 15, 33, 233, 284, 416 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| MspR9I | CCNGG | 1 cut(s) | 334 |
| MunI | CAATTG | 1 cut(s) | 393 |
| MvaI | CCWGG | 1 cut(s) | 334 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 64, 167, 338 |
| NlaIII | CATG | 2 cut(s) | 131, 484 |
| NlaIV | GGNNCC | 2 cut(s) | 243, 331 |
| NspI | RCATGY | 1 cut(s) | 484 |
| PciI | ACATGT | 1 cut(s) | 480 |
| PkrI | GCNGC | 2 cut(s) | 163, 269 |
| PscI | ACATGT | 1 cut(s) | 480 |
| Psp6I | CCWGG | 1 cut(s) | 332 |
| PspGI | CCWGG | 1 cut(s) | 332 |
| PspN4I | GGNNCC | 2 cut(s) | 243, 331 |
| PspPI | GGNCC | 1 cut(s) | 330 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SaqAI | TTAA | 5 cut(s) | 15, 33, 233, 284, 416 |
| SatI | GCNGC | 2 cut(s) | 162, 268 |
| Sau96I | GGNCC | 1 cut(s) | 330 |
| ScrFI | CCNGG | 1 cut(s) | 334 |
| SduI | GDGCHC | 1 cut(s) | 109 |
| SetI | ASST | 6 cut(s) | 78, 87, 136, 166, 172, 177 |
| SfaNI | GCATC | 2 cut(s) | 279, 328 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 2 cut(s) | 53, 165 |
| SmoI | CTYRAG | 2 cut(s) | 53, 165 |
| Sse9I | AATT | 5 cut(s) | 22, 117, 281, 393, 400 |
| SsiI | CCGC | 3 cut(s) | 58, 268, 377 |
| SspMI | CTAG | 1 cut(s) | 432 |
| StyD4I | CCNGG | 1 cut(s) | 332 |
| TaaI | ACNGT | 3 cut(s) | 407, 442, 454 |
| TaiI | ACGT | 1 cut(s) | 177 |
| TasI | AATT | 5 cut(s) | 22, 117, 281, 393, 400 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TauI | GCSGC | 1 cut(s) | 270 |
| Tru1I | TTAA | 5 cut(s) | 15, 33, 233, 284, 416 |
| Tru9I | TTAA | 5 cut(s) | 15, 33, 233, 284, 416 |
| TseI | GCWGC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 2 cut(s) | 144, 486 |
| TspGWI | ACGGA | 1 cut(s) | 254 |
| XceI | RCATGY | 1 cut(s) | 484 |
| XspI | CTAG | 1 cut(s) | 432 |