WSTF, HB1, Itc1p, MBD9 motif 1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 154, 364 |
| AcoI | YGGCCR | 1 cut(s) | 361 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AgsI | TTSAA | 3 cut(s) | 92, 284, 416 |
| AluBI | AGCT | 5 cut(s) | 60, 181, 230, 260, 266 |
| AluI | AGCT | 5 cut(s) | 60, 181, 230, 260, 266 |
| Alw21I | GWGCWC | 1 cut(s) | 205 |
| AoxI | GGCC | 1 cut(s) | 361 |
| ApeKI | GCWGC | 1 cut(s) | 257 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| Bbv12I | GWGCWC | 1 cut(s) | 205 |
| BbvI | GCAGC | 1 cut(s) | 269 |
| BccI | CCATC | 1 cut(s) | 353 |
| BisI | GCNGC | 2 cut(s) | 258, 364 |
| BlsI | GCNGC | 2 cut(s) | 259, 365 |
| BmiI | GGNNCC | 1 cut(s) | 339 |
| BmsI | GCATC | 1 cut(s) | 375 |
| BpuEI | CTTGAG | 2 cut(s) | 134, 246 |
| BseGI | GGATG | 1 cut(s) | 358 |
| BseMII | CTCAG | 2 cut(s) | 44, 264 |
| BseRI | GAGGAG | 3 cut(s) | 70, 137, 195 |
| BseXI | GCAGC | 1 cut(s) | 269 |
| BshFI | GGCC | 1 cut(s) | 363 |
| BsiHKAI | GWGCWC | 1 cut(s) | 205 |
| BsnI | GGCC | 1 cut(s) | 363 |
| Bsp1286I | GDGCHC | 1 cut(s) | 205 |
| BspACI | CCGC | 2 cut(s) | 154, 364 |
| BspANI | GGCC | 1 cut(s) | 363 |
| BspCNI | CTCAG | 2 cut(s) | 45, 265 |
| BspLI | GGNNCC | 1 cut(s) | 339 |
| BstDEI | CTNAG | 2 cut(s) | 53, 273 |
| BstF5I | GGATG | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 160, 263 |
| BstV1I | GCAGC | 1 cut(s) | 269 |
| BsuRI | GGCC | 1 cut(s) | 363 |
| BtsCI | GGATG | 1 cut(s) | 358 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviAII | CATG | 2 cut(s) | 77, 224 |
| CviJI | RGCY | 7 cut(s) | 60, 181, 230, 260, 266, 340, 363 |
| CviKI_1 | RGCY | 7 cut(s) | 60, 181, 230, 260, 266, 340, 363 |
| CviQI | GTAC | 1 cut(s) | 19 |
| DdeI | CTNAG | 2 cut(s) | 53, 273 |
| EaeI | YGGCCR | 1 cut(s) | 361 |
| Eco32I | GATATC | 1 cut(s) | 406 |
| EcoRV | GATATC | 1 cut(s) | 406 |
| FaeI | CATG | 2 cut(s) | 80, 227 |
| FaiI | YATR | 4 cut(s) | 78, 225, 296, 315 |
| FatI | CATG | 2 cut(s) | 76, 223 |
| Fnu4HI | GCNGC | 2 cut(s) | 258, 364 |
| FokI | GGATG | 1 cut(s) | 365 |
| Fsp4HI | GCNGC | 2 cut(s) | 258, 364 |
| GluI | GCNGC | 2 cut(s) | 258, 364 |
| HaeIII | GGCC | 1 cut(s) | 363 |
| Hin1II | CATG | 2 cut(s) | 80, 227 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 1 cut(s) | 220 |
| HpyCH4IV | ACGT | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 4 cut(s) | 42, 125, 163, 191 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 160, 263 |
| HpyF3I | CTNAG | 2 cut(s) | 53, 273 |
| HpySE526I | ACGT | 1 cut(s) | 17 |
| Hsp92II | CATG | 2 cut(s) | 80, 227 |
| LmnI | GCTCC | 3 cut(s) | 57, 208, 337 |
| LpnPI | CCDG | 1 cut(s) | 46 |
| Lsp1109I | GCAGC | 1 cut(s) | 269 |
| LweI | GCATC | 1 cut(s) | 375 |
| MaeII | ACGT | 1 cut(s) | 17 |
| MaeIII | GTNAC | 2 cut(s) | 13, 386 |
| MboII | GAAGA | 2 cut(s) | 80, 413 |
| MhlI | GDGCHC | 1 cut(s) | 205 |
| MluCI | AATT | 2 cut(s) | 213, 377 |
| MnlI | CCTC | 5 cut(s) | 25, 48, 158, 216, 283 |
| MseI | TTAA | 3 cut(s) | 120, 329, 380 |
| MslI | CAYNNNNRTG | 1 cut(s) | 318 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 160, 263 |
| NlaIII | CATG | 2 cut(s) | 80, 227 |
| NlaIV | GGNNCC | 1 cut(s) | 339 |
| PkrI | GCNGC | 2 cut(s) | 259, 365 |
| PspN4I | GGNNCC | 1 cut(s) | 339 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 318 |
| SaqAI | TTAA | 3 cut(s) | 120, 329, 380 |
| SatI | GCNGC | 2 cut(s) | 258, 364 |
| SduI | GDGCHC | 1 cut(s) | 205 |
| SfaNI | GCATC | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 318 |
| SmlI | CTYRAG | 2 cut(s) | 149, 261 |
| SmoI | CTYRAG | 2 cut(s) | 149, 261 |
| Sse9I | AATT | 2 cut(s) | 213, 377 |
| SsiI | CCGC | 2 cut(s) | 154, 364 |
| TaiI | ACGT | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 213, 377 |
| TauI | GCSGC | 1 cut(s) | 366 |
| Tru1I | TTAA | 3 cut(s) | 120, 329, 380 |
| Tru9I | TTAA | 3 cut(s) | 120, 329, 380 |
| TseI | GCWGC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 2 cut(s) | 93, 240 |
| TspGWI | ACGGA | 1 cut(s) | 350 |