WSTF, HB1, Itc1p, MBD9 motif 1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 140, 153 |
| AfaI | GTAC | 2 cut(s) | 24, 304 |
| AgsI | TTSAA | 5 cut(s) | 65, 79, 94, 128, 280 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 130, 162 |
| AluBI | AGCT | 2 cut(s) | 41, 47 |
| AluI | AGCT | 2 cut(s) | 41, 47 |
| Alw26I | GTCTC | 1 cut(s) | 259 |
| AlwI | GGATC | 2 cut(s) | 140, 153 |
| Ama87I | CYCGRG | 1 cut(s) | 296 |
| ApeKI | GCWGC | 2 cut(s) | 38, 121 |
| AspLEI | GCGC | 1 cut(s) | 188 |
| AvaI | CYCGRG | 1 cut(s) | 296 |
| BamHI | GGATCC | 1 cut(s) | 145 |
| BbvI | GCAGC | 2 cut(s) | 50, 108 |
| BccI | CCATC | 1 cut(s) | 101 |
| BcoDI | GTCTC | 1 cut(s) | 259 |
| BfaI | CTAG | 1 cut(s) | 312 |
| BisI | GCNGC | 2 cut(s) | 39, 122 |
| BlsI | GCNGC | 2 cut(s) | 40, 123 |
| BmeT110I | CYCGRG | 1 cut(s) | 296 |
| BmiI | GGNNCC | 2 cut(s) | 147, 176 |
| BpuEI | CTTGAG | 1 cut(s) | 27 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 102, 132 |
| BseXI | GCAGC | 2 cut(s) | 50, 108 |
| BsgI | GTGCAG | 1 cut(s) | 366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 296 |
| BsmAI | GTCTC | 1 cut(s) | 259 |
| BsoBI | CYCGRG | 1 cut(s) | 296 |
| Bsp143I | GATC | 1 cut(s) | 145 |
| BspLI | GGNNCC | 2 cut(s) | 147, 176 |
| BspPI | GGATC | 2 cut(s) | 140, 153 |
| BspQI | GCTCTTC | 1 cut(s) | 226 |
| BssMI | GATC | 1 cut(s) | 145 |
| Bst4CI | ACNGT | 2 cut(s) | 12, 251 |
| Bst6I | CTCTTC | 1 cut(s) | 226 |
| BstHHI | GCGC | 1 cut(s) | 188 |
| BstKTI | GATC | 1 cut(s) | 148 |
| BstMAI | GTCTC | 1 cut(s) | 259 |
| BstMBI | GATC | 1 cut(s) | 145 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 44 |
| BstV1I | GCAGC | 2 cut(s) | 50, 108 |
| BstX2I | RGATCY | 1 cut(s) | 145 |
| BstYI | RGATCY | 1 cut(s) | 145 |
| CfoI | GCGC | 1 cut(s) | 188 |
| Csp6I | GTAC | 2 cut(s) | 23, 303 |
| CviAII | CATG | 1 cut(s) | 50 |
| CviJI | RGCY | 3 cut(s) | 41, 47, 236 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 47, 236 |
| CviQI | GTAC | 2 cut(s) | 23, 303 |
| DpnI | GATC | 1 cut(s) | 147 |
| DpnII | GATC | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 1 cut(s) | 226 |
| EarI | CTCTTC | 1 cut(s) | 226 |
| Eco88I | CYCGRG | 1 cut(s) | 296 |
| FaeI | CATG | 1 cut(s) | 53 |
| FaiI | YATR | 6 cut(s) | 51, 102, 332, 358, 362, 364 |
| FatI | CATG | 1 cut(s) | 49 |
| Fnu4HI | GCNGC | 2 cut(s) | 39, 122 |
| Fsp4HI | GCNGC | 2 cut(s) | 39, 122 |
| FspBI | CTAG | 1 cut(s) | 312 |
| GlaI | GCGC | 1 cut(s) | 187 |
| GluI | GCNGC | 2 cut(s) | 39, 122 |
| HhaI | GCGC | 1 cut(s) | 188 |
| Hin1II | CATG | 1 cut(s) | 53 |
| Hin6I | GCGC | 1 cut(s) | 186 |
| HinP1I | GCGC | 1 cut(s) | 186 |
| HinfI | GANTC | 3 cut(s) | 4, 79, 242 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| Hpy188III | TCNNGA | 5 cut(s) | 76, 128, 277, 298, 312 |
| HpyAV | CCTTC | 1 cut(s) | 226 |
| HpyCH4III | ACNGT | 2 cut(s) | 12, 251 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 3 cut(s) | 18, 53, 347 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 44 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| Hsp92II | CATG | 1 cut(s) | 53 |
| HspAI | GCGC | 1 cut(s) | 186 |
| Kzo9I | GATC | 1 cut(s) | 145 |
| LguI | GCTCTTC | 1 cut(s) | 226 |
| Lsp1109I | GCAGC | 2 cut(s) | 50, 108 |
| MaeI | CTAG | 1 cut(s) | 312 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MalI | GATC | 1 cut(s) | 147 |
| MboI | GATC | 1 cut(s) | 145 |
| MboII | GAAGA | 3 cut(s) | 150, 213, 338 |
| MflI | RGATCY | 1 cut(s) | 145 |
| MluCI | AATT | 1 cut(s) | 89 |
| MlyI | GAGTC | 1 cut(s) | 236 |
| MmeI | TCCRAC | 1 cut(s) | 270 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 145 |
| NlaIII | CATG | 1 cut(s) | 53 |
| NlaIV | GGNNCC | 2 cut(s) | 147, 176 |
| PaeR7I | CTCGAG | 1 cut(s) | 296 |
| PciSI | GCTCTTC | 1 cut(s) | 226 |
| PfeI | GAWTC | 2 cut(s) | 4, 79 |
| PkrI | GCNGC | 2 cut(s) | 40, 123 |
| PleI | GAGTC | 1 cut(s) | 236 |
| PpsI | GAGTC | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 2 cut(s) | 147, 176 |
| PsuI | RGATCY | 1 cut(s) | 145 |
| RsaI | GTAC | 2 cut(s) | 24, 304 |
| RsaNI | GTAC | 2 cut(s) | 23, 303 |
| SapI | GCTCTTC | 1 cut(s) | 226 |
| SatI | GCNGC | 2 cut(s) | 39, 122 |
| Sau3AI | GATC | 1 cut(s) | 145 |
| SchI | GAGTC | 1 cut(s) | 236 |
| SetI | ASST | 3 cut(s) | 24, 43, 49 |
| Sfr274I | CTCGAG | 1 cut(s) | 296 |
| SlaI | CTCGAG | 1 cut(s) | 296 |
| SmlI | CTYRAG | 2 cut(s) | 42, 296 |
| SmoI | CTYRAG | 2 cut(s) | 42, 296 |
| Sse9I | AATT | 1 cut(s) | 89 |
| SspMI | CTAG | 1 cut(s) | 312 |
| TaaI | ACNGT | 2 cut(s) | 12, 251 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TaqI | TCGA | 2 cut(s) | 270, 297 |
| TasI | AATT | 1 cut(s) | 89 |
| TatI | WGTACW | 1 cut(s) | 302 |
| TfiI | GAWTC | 2 cut(s) | 4, 79 |
| TseI | GCWGC | 2 cut(s) | 38, 121 |
| TspDTI | ATGAA | 2 cut(s) | 17, 180 |
| XbaI | TCTAGA | 1 cut(s) | 311 |
| XhoI | CTCGAG | 1 cut(s) | 296 |
| XspI | CTAG | 1 cut(s) | 312 |