FvH4_7g16130

Anthocyanidin reductase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
13882983 .. 13883459
477 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16130.t1

Sequence Viewer

Length: 267 bp
ATGGTACTGCTACACGACACTTCTGAAGCAGCAGTTTCTGGCCTAATGAGCATTGTGGAGTCTTGCATCAAATCAGGCACCGTAAAACGACTCATTTACACAGCCTCTGTGGTGGCTGCATCACCAATAAAAGACTCTGGAAACGGCTTCAAAGAAGTGTTGGACGAGTCTTGTTGGACTCCCTTCAATCTTTCATTTCCTCATGCCAATGAGGGATTCTTAATAGTAAGCATCATTAAGTTTGATATTCTAGAACGTAGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

89

Amino Acids

9.62

Weight (kDa)

5.55

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 77
AcsI RAATTY 1 cut(s) 261
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 1 cut(s) 6
AgsI TTSAA 2 cut(s) 151, 187
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AlwNI CAGNNNCTG 2 cut(s) 38, 107
AoxI GGCC 1 cut(s) 40
ApeKI GCWGC 2 cut(s) 29, 116
ApoI RAATTY 1 cut(s) 261
AsuHPI GGTGA 1 cut(s) 114
BanI GGYRCC 1 cut(s) 77
BbvI GCAGC 2 cut(s) 41, 103
BceAI ACGGC 1 cut(s) 160
BfaI CTAG 1 cut(s) 251
BisI GCNGC 2 cut(s) 30, 117
BlsI GCNGC 2 cut(s) 31, 118
BmiI GGNNCC 1 cut(s) 79
BmsI GCATC 3 cut(s) 75, 128, 240
BseXI GCAGC 2 cut(s) 41, 103
BshFI GGCC 1 cut(s) 42
BshNI GGYRCC 1 cut(s) 77
BsnI GGCC 1 cut(s) 42
BspANI GGCC 1 cut(s) 42
BspLI GGNNCC 1 cut(s) 79
BspT107I GGYRCC 1 cut(s) 77
Bst4CI ACNGT 1 cut(s) 82
BstMWI GCNNNNNNNGC 1 cut(s) 48
BstV1I GCAGC 2 cut(s) 41, 103
BsuRI GGCC 1 cut(s) 42
CaiI CAGNNNCTG 2 cut(s) 38, 107
Csp6I GTAC 1 cut(s) 5
CviAII CATG 1 cut(s) 203
CviJI RGCY 4 cut(s) 42, 104, 116, 147
CviKI_1 RGCY 4 cut(s) 42, 104, 116, 147
CviQI GTAC 1 cut(s) 5
Eco57I CTGAAG 1 cut(s) 45
FaeI CATG 1 cut(s) 206
FaiI YATR 1 cut(s) 204
FatI CATG 1 cut(s) 202
Fnu4HI GCNGC 2 cut(s) 30, 117
Fsp4HI GCNGC 2 cut(s) 30, 117
FspBI CTAG 1 cut(s) 251
GluI GCNGC 2 cut(s) 30, 117
HaeIII GGCC 1 cut(s) 42
Hin1II CATG 1 cut(s) 206
HinfI GANTC 6 cut(s) 59, 90, 134, 167, 178, 216
HphI GGTGA 1 cut(s) 114
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 2 cut(s) 138, 251
HpyAV CCTTC 1 cut(s) 193
HpyCH4III ACNGT 1 cut(s) 82
HpyCH4IV ACGT 1 cut(s) 256
HpyCH4V TGCA 2 cut(s) 66, 119
HpyF10VI GCNNNNNNNGC 1 cut(s) 48
HpySE526I ACGT 1 cut(s) 256
Hsp92II CATG 1 cut(s) 206
LpnPI CCDG 3 cut(s) 24, 60, 123
Lsp1109I GCAGC 2 cut(s) 41, 103
LweI GCATC 3 cut(s) 75, 128, 240
MaeI CTAG 1 cut(s) 251
MaeII ACGT 1 cut(s) 256
MluCI AATT 1 cut(s) 261
MlyI GAGTC 5 cut(s) 68, 84, 128, 172, 176
MmeI TCCRAC 2 cut(s) 141, 155
MnlI CCTC 3 cut(s) 115, 205, 210
MseI TTAA 2 cut(s) 221, 237
MslI CAYNNNNRTG 1 cut(s) 207
MwoI GCNNNNNNNGC 1 cut(s) 48
NlaIII CATG 1 cut(s) 206
NlaIV GGNNCC 1 cut(s) 79
PfeI GAWTC 1 cut(s) 216
PkrI GCNGC 2 cut(s) 31, 118
PleI GAGTC 5 cut(s) 67, 84, 128, 172, 175
PpsI GAGTC 5 cut(s) 67, 84, 128, 172, 175
PspN4I GGNNCC 1 cut(s) 79
PstNI CAGNNNCTG 2 cut(s) 38, 107
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
RseI CAYNNNNRTG 1 cut(s) 207
SaqAI TTAA 2 cut(s) 221, 237
SatI GCNGC 2 cut(s) 30, 117
SchI GAGTC 5 cut(s) 68, 84, 128, 172, 176
SetI ASST 1 cut(s) 259
SfaNI GCATC 3 cut(s) 75, 128, 240
SgeI CNNG 9 cut(s) 26, 51, 75, 87, 150, 178, 183, 215, 263
SmiMI CAYNNNNRTG 1 cut(s) 207
Sse9I AATT 1 cut(s) 261
SspMI CTAG 1 cut(s) 251
TaaI ACNGT 1 cut(s) 82
TaiI ACGT 1 cut(s) 259
TasI AATT 1 cut(s) 261
TfiI GAWTC 1 cut(s) 216
Tru1I TTAA 2 cut(s) 221, 237
Tru9I TTAA 2 cut(s) 221, 237
TseI GCWGC 2 cut(s) 29, 116
TspDTI ATGAA 1 cut(s) 183
XapI RAATTY 1 cut(s) 261
XbaI TCTAGA 1 cut(s) 250
XspI CTAG 1 cut(s) 251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.