Rroxscaffold_4G00297370

Anthocyanidin reductase-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
17301942 .. 17302774
833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00297370.1

Sequence Viewer

Length: 432 bp
ATGGACGAGTCTTGTTGTACTCCCTTCAATCTTTCATTTCCTCATGCCAATGAGGGATTGATGGCATATACACACACAAAGACCTTTTCGGAGAAAGAATTGTTGGGGCATAATGAGAATGATGTTCTTGAGCTTGATGTAGTCAGCATTGCTTGTAGTCTTGTGGGAGGGGACACCCTTCTCCCTGGTGTGCCTGAGAGCATGGGAGTGCTCATCTCACAGGTCACAAACAATAAGGGGACGTATCATGTTCTGAGATTTTTGGAGGAATTGCTGGGTAAAGTTCCAATTGTGCATATTGAAGATGTCAGTGAGGCACACATTTTGTGCATGGAGAAGCCCCTTAATCACTGGCAAATTTCTATGTGCTACTACATATATGTCATCCGTAGAAATTGCTTCTCGCTGGTAAAAACATTATCCGGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

16.01

Weight (kDa)

5.22

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 422
AcsI RAATTY 1 cut(s) 357
AfaI GTAC 1 cut(s) 19
AgsI TTSAA 2 cut(s) 28, 302
AjnI CCWGG 1 cut(s) 184
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
Alw21I GWGCWC 1 cut(s) 213
Aor13HI TCCGGA 1 cut(s) 422
ApoI RAATTY 1 cut(s) 357
Bbv12I GWGCWC 1 cut(s) 213
BccI CCATC 1 cut(s) 55
BciT130I CCWGG 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 186
BmrFI CCNGG 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 184
BsaWI WCCGGW 1 cut(s) 422
Bse1I ACTGG 1 cut(s) 356
Bse3DI GCAATG 1 cut(s) 147
BseAI TCCGGA 1 cut(s) 422
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 1 cut(s) 184
BseGI GGATG 1 cut(s) 384
BseMI GCAATG 1 cut(s) 147
BseMII CTCAG 2 cut(s) 186, 245
BseNI ACTGG 1 cut(s) 356
BseYI CCCAGC 1 cut(s) 274
BsiHKAI GWGCWC 1 cut(s) 213
BsiSI CCGG 1 cut(s) 423
BslFI GGGAC 2 cut(s) 185, 253
BsmFI GGGAC 2 cut(s) 185, 253
Bsp1286I GDGCHC 1 cut(s) 213
Bsp13I TCCGGA 1 cut(s) 422
BspCNI CTCAG 2 cut(s) 187, 246
BspEI TCCGGA 1 cut(s) 422
BsrDI GCAATG 1 cut(s) 147
BsrI ACTGG 1 cut(s) 356
BssECI CCNNGG 1 cut(s) 184
Bst2UI CCWGG 1 cut(s) 186
BstDEI CTNAG 2 cut(s) 195, 254
BstF5I GGATG 1 cut(s) 384
BstNI CCWGG 1 cut(s) 186
BstSCI CCNGG 1 cut(s) 184
BtsCI GGATG 1 cut(s) 384
BtsIMutI CAGTG 2 cut(s) 316, 349
Csp6I GTAC 1 cut(s) 18
CviAII CATG 4 cut(s) 44, 202, 248, 331
CviJI RGCY 2 cut(s) 133, 340
CviKI_1 RGCY 2 cut(s) 133, 340
CviQI GTAC 1 cut(s) 18
DdeI CTNAG 2 cut(s) 195, 254
EcoRII CCWGG 1 cut(s) 184
FaeI CATG 4 cut(s) 47, 205, 251, 334
FaqI GGGAC 2 cut(s) 185, 253
FatI CATG 4 cut(s) 43, 201, 247, 330
FokI GGATG 1 cut(s) 371
GsaI CCCAGC 1 cut(s) 278
HapII CCGG 1 cut(s) 423
Hin1II CATG 4 cut(s) 47, 205, 251, 334
HinfI GANTC 1 cut(s) 8
HpaII CCGG 1 cut(s) 423
Hpy188I TCNGA 2 cut(s) 91, 255
Hpy188III TCNNGA 2 cut(s) 128, 423
HpyAV CCTTC 2 cut(s) 34, 188
HpyCH4IV ACGT 1 cut(s) 242
HpyCH4V TGCA 2 cut(s) 295, 330
HpyF3I CTNAG 2 cut(s) 195, 254
HpySE526I ACGT 1 cut(s) 242
Hsp92II CATG 4 cut(s) 47, 205, 251, 334
Kpn2I TCCGGA 1 cut(s) 422
LpnPI CCDG 7 cut(s) 171, 198, 206, 207, 260, 337, 392
MaeII ACGT 1 cut(s) 242
MaeIII GTNAC 1 cut(s) 223
MboII GAAGA 1 cut(s) 314
MfeI CAATTG 1 cut(s) 288
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 6 cut(s) 98, 269, 288, 357, 394, 427
MlyI GAGTC 1 cut(s) 17
MnlI CCTC 5 cut(s) 46, 51, 161, 259, 307
MroI TCCGGA 1 cut(s) 422
MseI TTAA 2 cut(s) 345, 430
MslI CAYNNNNRTG 2 cut(s) 48, 206
MspI CCGG 1 cut(s) 423
MspR9I CCNGG 1 cut(s) 186
MunI CAATTG 1 cut(s) 288
MvaI CCWGG 1 cut(s) 186
NlaIII CATG 4 cut(s) 47, 205, 251, 334
NmuCI GTSAC 1 cut(s) 223
PleI GAGTC 1 cut(s) 16
PpsI GAGTC 1 cut(s) 16
Psp6I CCWGG 1 cut(s) 184
PspFI CCCAGC 1 cut(s) 274
PspGI CCWGG 1 cut(s) 184
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
RseI CAYNNNNRTG 2 cut(s) 48, 206
SaqAI TTAA 2 cut(s) 345, 430
SchI GAGTC 1 cut(s) 17
ScrFI CCNGG 1 cut(s) 186
SduI GDGCHC 1 cut(s) 213
SetI ASST 4 cut(s) 86, 135, 225, 245
SmiMI CAYNNNNRTG 2 cut(s) 48, 206
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 6 cut(s) 98, 269, 288, 357, 394, 427
StyD4I CCNGG 1 cut(s) 184
TaiI ACGT 1 cut(s) 245
TasI AATT 6 cut(s) 98, 269, 288, 357, 394, 427
TatI WGTACW 1 cut(s) 17
Tru1I TTAA 2 cut(s) 345, 430
Tru9I TTAA 2 cut(s) 345, 430
TscAI CASTG 2 cut(s) 316, 356
TseFI GTSAC 1 cut(s) 223
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 1 cut(s) 24
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 2 cut(s) 316, 356
XapI RAATTY 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.