Rorug07G0021900

Anthocyanidin reductase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
1586277 .. 1586771
495 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0021900.1

Sequence Viewer

Length: 195 bp
ATGGGAAGTACTCGACTCTCTTCCTTCCTTCGTTTTCTGATTATGATATTATTCATCGCTGCATCCATCTTGGCTATGCAACCATCTCAAGTTGATGCAGATTTGAAGTTCCGGAAACTAGGCGGCAAAACCAGGCCATGCCCGCCACCTCCTCCGATACCACACCTTGTGAAGCATCAAATCCCTCCTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.07

Weight (kDa)

11.01

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 111
AciI CCGC 2 cut(s) 123, 143
AdeI CACNNNGTG 1 cut(s) 169
AfaI GTAC 1 cut(s) 10
AgsI TTSAA 1 cut(s) 106
AjnI CCWGG 1 cut(s) 131
Aor13HI TCCGGA 1 cut(s) 111
AoxI GGCC 1 cut(s) 134
ApeKI GCWGC 1 cut(s) 59
BbvI GCAGC 1 cut(s) 46
BccI CCATC 2 cut(s) 74, 91
BciT130I CCWGG 1 cut(s) 133
BfaI CTAG 1 cut(s) 119
BisI GCNGC 2 cut(s) 60, 124
BlsI GCNGC 2 cut(s) 61, 125
BmcAI AGTACT 1 cut(s) 10
Bme1390I CCNGG 1 cut(s) 133
BmrFI CCNGG 1 cut(s) 133
BmsI GCATC 3 cut(s) 71, 85, 184
BpuEI CTTGAG 1 cut(s) 72
BsaWI WCCGGW 1 cut(s) 111
BseAI TCCGGA 1 cut(s) 111
BseBI CCWGG 1 cut(s) 133
BseGI GGATG 1 cut(s) 62
BseRI GAGGAG 2 cut(s) 141, 177
BseXI GCAGC 1 cut(s) 46
BshFI GGCC 1 cut(s) 136
BsiSI CCGG 1 cut(s) 112
BsnI GGCC 1 cut(s) 136
Bsp13I TCCGGA 1 cut(s) 111
BspACI CCGC 2 cut(s) 123, 143
BspANI GGCC 1 cut(s) 136
BspEI TCCGGA 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 133
Bst6I CTCTTC 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 143
BstF5I GGATG 1 cut(s) 62
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 133
BstSCI CCNGG 1 cut(s) 131
BstV1I GCAGC 1 cut(s) 46
BsuRI GGCC 1 cut(s) 136
BtgZI GCGATG 1 cut(s) 40
BtsCI GGATG 1 cut(s) 62
Cac8I GCNNGC 1 cut(s) 143
Csp6I GTAC 1 cut(s) 9
CviAII CATG 1 cut(s) 138
CviJI RGCY 2 cut(s) 74, 136
CviKI_1 RGCY 2 cut(s) 74, 136
CviQI GTAC 1 cut(s) 9
DraIII CACNNNGTG 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 25
EcoRII CCWGG 1 cut(s) 131
FaeI CATG 1 cut(s) 141
FaiI YATR 3 cut(s) 44, 77, 139
FatI CATG 1 cut(s) 137
FauI CCCGC 1 cut(s) 150
Fnu4HI GCNGC 2 cut(s) 60, 124
FokI GGATG 1 cut(s) 49
Fsp4HI GCNGC 2 cut(s) 60, 124
FspBI CTAG 1 cut(s) 119
GluI GCNGC 2 cut(s) 60, 124
HaeIII GGCC 1 cut(s) 136
HapII CCGG 1 cut(s) 112
Hin1II CATG 1 cut(s) 141
HinfI GANTC 1 cut(s) 15
HpaII CCGG 1 cut(s) 112
Hpy188I TCNGA 2 cut(s) 39, 156
Hpy188III TCNNGA 1 cut(s) 112
HpyAV CCTTC 2 cut(s) 34, 38
HpyCH4V TGCA 3 cut(s) 62, 79, 98
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
Hsp92II CATG 1 cut(s) 141
Kpn2I TCCGGA 1 cut(s) 111
LpnPI CCDG 3 cut(s) 118, 125, 145
Lsp1109I GCAGC 1 cut(s) 46
LweI GCATC 3 cut(s) 71, 85, 184
MaeI CTAG 1 cut(s) 119
MboII GAAGA 1 cut(s) 12
MlyI GAGTC 1 cut(s) 9
MnlI CCTC 3 cut(s) 159, 162, 195
MroI TCCGGA 1 cut(s) 111
MspI CCGG 1 cut(s) 112
MspR9I CCNGG 1 cut(s) 133
MvaI CCWGG 1 cut(s) 133
MwoI GCNNNNNNNGC 1 cut(s) 142
NlaIII CATG 1 cut(s) 141
PkrI GCNGC 2 cut(s) 61, 125
PleI GAGTC 1 cut(s) 9
PpsI GAGTC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 131
PspGI CCWGG 1 cut(s) 131
RsaI GTAC 1 cut(s) 10
RsaNI GTAC 1 cut(s) 9
SatI GCNGC 2 cut(s) 60, 124
ScaI AGTACT 1 cut(s) 10
SchI GAGTC 1 cut(s) 9
ScrFI CCNGG 1 cut(s) 133
SetI ASST 2 cut(s) 151, 168
SfaNI GCATC 3 cut(s) 71, 85, 184
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
SsiI CCGC 2 cut(s) 123, 143
SspMI CTAG 1 cut(s) 119
StyD4I CCNGG 1 cut(s) 131
TaqI TCGA 1 cut(s) 13
TatI WGTACW 1 cut(s) 8
TauI GCSGC 1 cut(s) 126
TseI GCWGC 1 cut(s) 59
TspDTI ATGAA 1 cut(s) 43
XspI CTAG 1 cut(s) 119
ZrmI AGTACT 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.