MD07G1035500.v1.1

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0001318
Physical Location & Seq
Reverse (-)
2901227 .. 2902098
872 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1035500.v1.1.491

Sequence Viewer

Length: 261 bp
ATGGCAACCTTTAACCGCTACCGAGATGACCATGGCACTTTCATCAGTAAGGCACTGCATGTAGCCCTCCGATGCCTCAATGACCCCAAGAAGTACTTTGAGAAGGTTCTTCGCAATGCGGTCAAGAGGGTTGGAACAGATGAGGATGCTCTCACTCGTGTAATCGTAACAAGGGCTGAGAGGGACTTGAAAGACATCAAAGAGGTTTACTACAAGAAGAACAGCGTTCCTCTCGACCATGCTGTGGCCAAAGAAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

87

Amino Acids

9.99

Weight (kDa)

9.48

Isoelectric Point (pI)

18.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 32 - 86 8.9e-13 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 244
AciI CCGC 2 cut(s) 16, 119
AcoI YGGCCR 1 cut(s) 246
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 1 cut(s) 244
AgsI TTSAA 1 cut(s) 190
AoxI GGCC 1 cut(s) 246
BalI TGGCCA 1 cut(s) 248
BauI CACGAG 1 cut(s) 156
BmcAI AGTACT 1 cut(s) 95
BmsI GCATC 2 cut(s) 62, 136
BsaJI CCNNGG 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse3DI GCAATG 1 cut(s) 121
BseDI CCNNGG 1 cut(s) 31
BseGI GGATG 1 cut(s) 151
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMI GCAATG 1 cut(s) 121
BseMII CTCAG 1 cut(s) 168
BshFI GGCC 1 cut(s) 248
BslFI GGGAC 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 244
BsmFI GGGAC 1 cut(s) 197
BsnI GGCC 1 cut(s) 248
Bsp19I CCATGG 1 cut(s) 31
BspACI CCGC 2 cut(s) 16, 119
BspANI GGCC 1 cut(s) 248
BspCNI CTCAG 1 cut(s) 169
BsrDI GCAATG 1 cut(s) 121
BssECI CCNNGG 1 cut(s) 31
BssSI CACGAG 1 cut(s) 156
BssT1I CCWWGG 1 cut(s) 31
Bst2BI CACGAG 1 cut(s) 156
BstDEI CTNAG 2 cut(s) 177, 258
BstDSI CCRYGG 1 cut(s) 31
BstF5I GGATG 1 cut(s) 151
BstNSI RCATGY 1 cut(s) 62
BsuRI GGCC 1 cut(s) 248
BtgI CCRYGG 1 cut(s) 31
BtsCI GGATG 1 cut(s) 151
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 1 cut(s) 53
Csp6I GTAC 1 cut(s) 94
CviAII CATG 3 cut(s) 32, 59, 239
CviJI RGCY 3 cut(s) 65, 176, 248
CviKI_1 RGCY 3 cut(s) 65, 176, 248
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 2 cut(s) 177, 258
EaeI YGGCCR 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 31
EcoT14I CCWWGG 1 cut(s) 31
ErhI CCWWGG 1 cut(s) 31
FaeI CATG 3 cut(s) 35, 62, 242
FaiI YATR 3 cut(s) 33, 60, 240
FalI AAGNNNNNCTT 2 cut(s) 80, 112
FaqI GGGAC 1 cut(s) 197
FatI CATG 3 cut(s) 31, 58, 238
FokI GGATG 1 cut(s) 158
HaeIII GGCC 1 cut(s) 248
Hin1II CATG 3 cut(s) 35, 62, 242
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 1 cut(s) 71
Hpy188III TCNNGA 2 cut(s) 124, 233
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 97
HpyCH4V TGCA 1 cut(s) 58
HpyF3I CTNAG 2 cut(s) 177, 258
Hsp92II CATG 3 cut(s) 35, 62, 242
LweI GCATC 2 cut(s) 62, 136
MaeIII GTNAC 1 cut(s) 166
MboII GAAGA 2 cut(s) 101, 229
MlsI TGGCCA 1 cut(s) 248
MluNI TGGCCA 1 cut(s) 248
MmeI TCCRAC 1 cut(s) 112
MnlI CCTC 7 cut(s) 77, 86, 120, 136, 174, 196, 240
Mox20I TGGCCA 1 cut(s) 248
MscI TGGCCA 1 cut(s) 248
MseI TTAA 1 cut(s) 12
Msp20I TGGCCA 1 cut(s) 248
NcoI CCATGG 1 cut(s) 31
NlaIII CATG 3 cut(s) 35, 62, 242
NspI RCATGY 1 cut(s) 62
PflMI CCANNNNNTGG 1 cut(s) 244
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
SaqAI TTAA 1 cut(s) 12
ScaI AGTACT 1 cut(s) 95
SetI ASST 3 cut(s) 11, 108, 207
SfaNI GCATC 2 cut(s) 62, 136
SsiI CCGC 2 cut(s) 16, 119
StyI CCWWGG 1 cut(s) 31
TaqI TCGA 1 cut(s) 234
TatI WGTACW 1 cut(s) 93
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TscAI CASTG 1 cut(s) 60
TspDTI ATGAA 1 cut(s) 31
TspRI CASTG 1 cut(s) 60
Van91I CCANNNNNTGG 1 cut(s) 244
XceI RCATGY 1 cut(s) 62
ZrmI AGTACT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.