RLG00000030414

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001318
Physical Location & Seq
Forward (+)
61130768 .. 61133690
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030414

Sequence Viewer

Length: 945 bp
ATGGCATCCCTCATTACTCCTGATCAATTTTCTGCTAACCAAGATGCAGAGGCTCTCCGAAAGGCGTGTCAAGGATGGGGGACTAATGAGAAGGCTATCATCTCCATCCTGGGTCATAGAAATGCATGTCAAAGAAAAGAGATCAGGGCAGCTTATGAGCAACTTTATCAAGAAGATCTTATCAAGCGCCTTGAGTCTGAGCTCTCTGGGGATTTTGAGAGAGCGGTGTACCGTTGGATATTGGATCCAGCAGATCGTGATGCAGTTTTGGCTAATGTGGCCATCAAGAAATCCAACACTGACTACAATGTCATCATAGAAATGTCCTGCGTTCACTCTCCTGAAGAGCTCCTAGCTGCAAGAAGAGCTTACCAGCTTCGCTACAAGCACTCGTTGGAAGAAGATCTAGCTGCACATACCACCGGTGATATGCGCAAGCTTTTGGTTGCTTTGGTGACTGCTTACCGTTATGCCGGTAACGAGATCAGTGCCAAGTTGGCAAATTCAGAAGCTGATATTCTTCACGATGCTATCAAAGACAAGGCTTTCAATCATGAAGATATTATCAGGATCCTGAGTACAAGGAGCAAGACACAGCTCATGGCTACATTCAACAAATACAGAGATGATAAGGGCATTTCTATCAGCAAGGCTTTGTTGGATGAGGAAGCTAATGATTTCCAGAAGGCATTACATACAGCCATTCGATGCCTCAATGACCCCAGGAAGTACTTTGAGAAGGTACTTCGCAATGCAATCAAAAGGCTTGGAAGCGATGAGGATGCTCTCACTCGTGTAATTGTTACAAGGGCAGAGAGGGACTTGAGGGACATCAAGGAGGTTTATTACAAGAAGAACAGTGTTCCTCTTGAACAGGCTGTGGCCAAAGACACTTCAGGGGACTACAAGGCCTTCCTCCTTACTCTGTTGGGAAAGGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

315

Amino Acids

35.73

Weight (kDa)

6.68

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 14 - 76 5.9e-24 Annexin
Annexin PF00191 87 - 151 7.3e-14 Annexin
Annexin PF00191 170 - 232 4.5e-12 Annexin
Annexin PF00191 244 - 309 2.1e-17 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
Acc16I TGCGCA 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 224
AciI CCGC 1 cut(s) 224
AclWI GGATC 4 cut(s) 239, 252, 565, 578
AcoI YGGCCR 2 cut(s) 279, 882
AcsI RAATTY 1 cut(s) 502
AcuI CTGAAG 2 cut(s) 363, 879
AfaI GTAC 4 cut(s) 230, 580, 731, 744
AgeI ACCGGT 1 cut(s) 422
AgsI TTSAA 3 cut(s) 550, 613, 872
AjnI CCWGG 2 cut(s) 108, 722
Alw21I GWGCWC 2 cut(s) 204, 351
AlwI GGATC 4 cut(s) 239, 252, 565, 578
AlwNI CAGNNNCTG 1 cut(s) 512
AoxI GGCC 3 cut(s) 279, 882, 909
ApeKI GCWGC 3 cut(s) 149, 356, 410
ApoI RAATTY 1 cut(s) 502
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
AsiGI ACCGGT 1 cut(s) 422
AspLEI GCGC 2 cut(s) 189, 435
AsuHPI GGTGA 2 cut(s) 437, 466
BalI TGGCCA 2 cut(s) 281, 884
BamHI GGATCC 2 cut(s) 244, 570
BanII GRGCYC 2 cut(s) 204, 351
BauI CACGAG 1 cut(s) 792
Bbv12I GWGCWC 2 cut(s) 204, 351
BbvI GCAGC 3 cut(s) 161, 343, 397
BccI CCATC 3 cut(s) 69, 113, 290
BcgI CGANNNNNNTGC 4 cut(s) 470, 504, 764, 798
BciT130I CCWGG 2 cut(s) 110, 724
BclI TGATCA 1 cut(s) 22
BfaI CTAG 2 cut(s) 353, 407
BfoI RGCGCY 1 cut(s) 190
BglI GCCNNNNNGGC 1 cut(s) 497
BglII AGATCT 2 cut(s) 175, 403
BisI GCNGC 3 cut(s) 150, 357, 411
BlsI GCNGC 3 cut(s) 151, 358, 412
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 2 cut(s) 110, 724
BmiI GGNNCC 2 cut(s) 246, 572
BmrFI CCNGG 2 cut(s) 110, 724
BmsI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
BpuEI CTTGAG 2 cut(s) 212, 844
BsaJI CCNNGG 2 cut(s) 109, 722
BsaWI WCCGGW 1 cut(s) 422
Bse118I RCCGGY 2 cut(s) 422, 473
Bse3DI GCAATG 1 cut(s) 757
BseBI CCWGG 2 cut(s) 110, 724
BseDI CCNNGG 2 cut(s) 109, 722
BseGI GGATG 5 cut(s) 5, 80, 105, 667, 787
BseMI GCAATG 1 cut(s) 757
BseMII CTCAG 2 cut(s) 189, 566
BseXI GCAGC 3 cut(s) 161, 343, 397
BsgI GTGCAG 1 cut(s) 396
BshFI GGCC 3 cut(s) 281, 884, 911
BshTI ACCGGT 1 cut(s) 422
BsiHKAI GWGCWC 2 cut(s) 204, 351
BsiSI CCGG 2 cut(s) 423, 474
BslFI GGGAC 4 cut(s) 94, 833, 842, 914
BsmFI GGGAC 4 cut(s) 94, 833, 842, 914
BsnI GGCC 3 cut(s) 281, 884, 911
Bsp1286I GDGCHC 2 cut(s) 204, 351
Bsp143I GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
BspACI CCGC 1 cut(s) 224
BspANI GGCC 3 cut(s) 281, 884, 911
BspCNI CTCAG 2 cut(s) 190, 567
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 2 cut(s) 246, 572
BspPI GGATC 4 cut(s) 239, 252, 565, 578
BspQI GCTCTTC 2 cut(s) 339, 358
BsrBI CCGCTC 1 cut(s) 224
BsrDI GCAATG 1 cut(s) 757
BsrFI RCCGGY 2 cut(s) 422, 473
BssAI RCCGGY 2 cut(s) 422, 473
BssECI CCNNGG 2 cut(s) 109, 722
BssMI GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
BssSI CACGAG 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 2 cut(s) 110, 724
Bst4CI ACNGT 3 cut(s) 233, 467, 860
Bst6I CTCTTC 2 cut(s) 339, 358
BstC8I GCNNGC 1 cut(s) 437
BstDEI CTNAG 2 cut(s) 198, 575
BstF5I GGATG 5 cut(s) 5, 80, 105, 667, 787
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 2 cut(s) 189, 435
BstKTI GATC 8 cut(s) 25, 144, 178, 247, 256, 406, 486, 573
BstMBI GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
BstMWI GCNNNNNNNGC 4 cut(s) 269, 278, 365, 497
BstNI CCWGG 2 cut(s) 110, 724
BstNSI RCATGY 1 cut(s) 129
BstSCI CCNGG 2 cut(s) 108, 722
BstV1I GCAGC 3 cut(s) 161, 343, 397
BstX2I RGATCY 4 cut(s) 175, 244, 403, 570
BstYI RGATCY 4 cut(s) 175, 244, 403, 570
BsuRI GGCC 3 cut(s) 281, 884, 911
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 5 cut(s) 5, 80, 105, 667, 787
BtsIMutI CAGTG 3 cut(s) 297, 493, 865
Cac8I GCNNGC 1 cut(s) 437
CaiI CAGNNNCTG 1 cut(s) 512
CciI TCATGA 1 cut(s) 553
CfoI GCGC 2 cut(s) 189, 435
Cfr10I RCCGGY 2 cut(s) 422, 473
Csp6I GTAC 4 cut(s) 229, 579, 730, 743
CspAI ACCGGT 1 cut(s) 422
CviAII CATG 3 cut(s) 126, 554, 601
CviQI GTAC 4 cut(s) 229, 579, 730, 743
DdeI CTNAG 2 cut(s) 198, 575
DpnI GATC 8 cut(s) 24, 143, 177, 246, 255, 405, 485, 572
DpnII GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 2 cut(s) 279, 882
Eam1104I CTCTTC 2 cut(s) 339, 358
EarI CTCTTC 2 cut(s) 339, 358
Ecl136II GAGCTC 2 cut(s) 202, 349
Eco147I AGGCCT 1 cut(s) 911
Eco24I GRGCYC 2 cut(s) 204, 351
Eco53kI GAGCTC 2 cut(s) 202, 349
Eco57I CTGAAG 2 cut(s) 363, 879
EcoICRI GAGCTC 2 cut(s) 202, 349
EcoRII CCWGG 2 cut(s) 108, 722
EcoT22I ATGCAT 1 cut(s) 127
EcoT38I GRGCYC 2 cut(s) 204, 351
FaeI CATG 3 cut(s) 129, 557, 604
FalI AAGNNNNNCTT 4 cut(s) 162, 194, 352, 384
FaqI GGGAC 4 cut(s) 94, 833, 842, 914
FatI CATG 3 cut(s) 125, 553, 600
FbaI TGATCA 1 cut(s) 22
Fnu4HI GCNGC 3 cut(s) 150, 357, 411
FokI GGATG 4 cut(s) 87, 92, 674, 794
FriOI GRGCYC 2 cut(s) 204, 351
Fsp4HI GCNGC 3 cut(s) 150, 357, 411
FspBI CTAG 2 cut(s) 353, 407
FspI TGCGCA 1 cut(s) 434
GlaI GCGC 2 cut(s) 188, 434
GluI GCNGC 3 cut(s) 150, 357, 411
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 3 cut(s) 281, 884, 911
HapII CCGG 2 cut(s) 423, 474
HhaI GCGC 2 cut(s) 189, 435
Hin1II CATG 3 cut(s) 129, 557, 604
Hin6I GCGC 2 cut(s) 187, 433
HinP1I GCGC 2 cut(s) 187, 433
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 1 cut(s) 194
HpaII CCGG 2 cut(s) 423, 474
HphI GGTGA 2 cut(s) 437, 466
Hpy166II GTNNAC 2 cut(s) 229, 334
Hpy188I TCNGA 3 cut(s) 59, 199, 508
Hpy8I GTNNAC 2 cut(s) 229, 334
HpyAV CCTTC 4 cut(s) 85, 679, 733, 922
HpyCH4III ACNGT 3 cut(s) 233, 467, 860
HpyCH4V TGCA 6 cut(s) 47, 125, 263, 359, 413, 755
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 278, 365, 497
HpyF3I CTNAG 2 cut(s) 198, 575
Hsp92II CATG 3 cut(s) 129, 557, 604
HspAI GCGC 2 cut(s) 187, 433
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
LguI GCTCTTC 2 cut(s) 339, 358
LmnI GCTCC 2 cut(s) 354, 585
Lsp1109I GCAGC 3 cut(s) 161, 343, 397
LweI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
MaeI CTAG 2 cut(s) 353, 407
MaeIII GTNAC 3 cut(s) 454, 476, 802
MalI GATC 8 cut(s) 24, 143, 177, 246, 255, 405, 485, 572
MbiI CCGCTC 1 cut(s) 224
MboI GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
MboII GAAGA 8 cut(s) 185, 356, 375, 410, 413, 512, 569, 865
MflI RGATCY 4 cut(s) 175, 244, 403, 570
MhlI GDGCHC 2 cut(s) 204, 351
MlsI TGGCCA 2 cut(s) 281, 884
MluCI AATT 3 cut(s) 26, 502, 798
MluNI TGGCCA 2 cut(s) 281, 884
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 4 cut(s) 215, 318, 375, 639
Mox20I TGGCCA 2 cut(s) 281, 884
Mph1103I ATGCAT 1 cut(s) 127
MscI TGGCCA 2 cut(s) 281, 884
MslI CAYNNNNRTG 2 cut(s) 120, 320
Msp20I TGGCCA 2 cut(s) 281, 884
MspI CCGG 2 cut(s) 423, 474
MspR9I CCNGG 2 cut(s) 110, 724
MvaI CCWGG 2 cut(s) 110, 724
MwoI GCNNNNNNNGC 4 cut(s) 269, 278, 365, 497
NdeII GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
NlaIII CATG 3 cut(s) 129, 557, 604
NlaIV GGNNCC 2 cut(s) 246, 572
NmuCI GTSAC 1 cut(s) 454
NsbI TGCGCA 1 cut(s) 434
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 1 cut(s) 129
PagI TCATGA 1 cut(s) 553
PceI AGGCCT 1 cut(s) 911
PciSI GCTCTTC 2 cut(s) 339, 358
PinAI ACCGGT 1 cut(s) 422
PkrI GCNGC 3 cut(s) 151, 358, 412
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
Psp124BI GAGCTC 2 cut(s) 204, 351
Psp6I CCWGG 2 cut(s) 108, 722
PspGI CCWGG 2 cut(s) 108, 722
PspN4I GGNNCC 2 cut(s) 246, 572
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 4 cut(s) 175, 244, 403, 570
RsaI GTAC 4 cut(s) 230, 580, 731, 744
RsaNI GTAC 4 cut(s) 229, 579, 730, 743
RseI CAYNNNNRTG 2 cut(s) 120, 320
SacI GAGCTC 2 cut(s) 204, 351
SapI GCTCTTC 2 cut(s) 339, 358
SatI GCNGC 3 cut(s) 150, 357, 411
Sau3AI GATC 8 cut(s) 22, 141, 175, 244, 253, 403, 483, 570
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 2 cut(s) 110, 724
SduI GDGCHC 2 cut(s) 204, 351
SfaNI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
SgrAI CRCCGGYG 1 cut(s) 422
SmiMI CAYNNNNRTG 2 cut(s) 120, 320
SmlI CTYRAG 2 cut(s) 191, 823
SmoI CTYRAG 2 cut(s) 191, 823
Sse9I AATT 3 cut(s) 26, 502, 798
SseBI AGGCCT 1 cut(s) 911
SsiI CCGC 1 cut(s) 224
SspMI CTAG 2 cut(s) 353, 407
SstI GAGCTC 2 cut(s) 204, 351
StuI AGGCCT 1 cut(s) 911
StyD4I CCNGG 2 cut(s) 108, 722
TaaI ACNGT 3 cut(s) 233, 467, 860
TaqI TCGA 1 cut(s) 706
TasI AATT 3 cut(s) 26, 502, 798
TatI WGTACW 2 cut(s) 578, 729
TscAI CASTG 3 cut(s) 304, 493, 865
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 3 cut(s) 149, 356, 410
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 1 cut(s) 570
TspRI CASTG 3 cut(s) 304, 493, 865
XapI RAATTY 1 cut(s) 502
XceI RCATGY 1 cut(s) 129
XspI CTAG 2 cut(s) 353, 407
ZrmI AGTACT 1 cut(s) 731
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.