RLG00000030418

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001318
Physical Location & Seq
Forward (+)
61183752 .. 61186568
2817 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030418

Sequence Viewer

Length: 942 bp
ATGGCATCCCTCATTACTCCAGATCAGTTCTCTGCTAACCAAGATGCCGAGGCTCTCCGAAAGGCGTGTCAAGGATGGGGGACTAACGAGAAGGCCATCATCTCCATACTGGGTCATAGAAGTGCAACTCAAAGAAAAGAAATCAGGGTCGCCTATGAACAACTTTATCAAGAAGATCTTCTCAAGCGCCTTGAGTCTGAGCTCTCTGGTGATTTTGAGAGAGCGGTTTACCGTTGGACATTGGATCCAGCTGATCGTGATGCTGTTTTGGCTAATCTGGCCATTAAGAAACCCGAGACTGACTACAATGTCATCATCGAAATCTCCAGCGTTCGGTGTCCTGAAGAGCTTCTAGCTGTAAGAAAAGCTTACCAGCTTCGCTACAGGTGCTCCTTGGAAGAAGATCTAGCTCAACACACCGCTGGTGATATCCGCAAGCTTTTGGTTGCTTTGGTGACTGCTTACCGCTATGACGGTAATGAGATCAATGAAAAGTTGGCAAGTTCAGAAGCTAATATTCTTCACGATGCTATCAAAGAGAAGTGTTTTAATCATGAAGAAATTATTAGGATCCTGAGTACAAGGAGCAAGACACAGCTCATGGCTACATTCAACAAATACAGAGATGACCATGGCAGTTCTATCAGCAAGAATTTATTGGGGGATGGGACTAATGATTTCCAGAAGGCATTGCATGTAGCCATTCGATGCCTCAATGACCCCAAGAAGTACTTTGAGAAGGTAATACGCAATGCTATCATAGGGACCGGGACCGATAAGGATGCTCTCACTCGGGTGATTGTTACGAGGGCAGAGAGGGACTTGAGGGACATCATGGTGGTTTACTACAAGAAGAACAGTGTTCCTCTTGAACAGGCTGTGGCCCAAGAAACTTCAGGGGACTACAAAACCTTCCTCCTTACTCTGTTGGGAAAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

314

Amino Acids

35.57

Weight (kDa)

7.01

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 14 - 76 6.6e-24 Annexin
Annexin PF00191 87 - 151 4.9e-14 Annexin
Annexin PF00191 170 - 232 1.1e-12 Annexin
Annexin PF00191 245 - 309 4.4e-15 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
AccBSI CCGCTC 1 cut(s) 224
AciI CCGC 4 cut(s) 224, 420, 433, 466
AclWI GGATC 4 cut(s) 239, 252, 565, 578
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 2 cut(s) 363, 879
AfaI GTAC 2 cut(s) 580, 731
AfiI CCNNNNNNNGG 1 cut(s) 333
AgsI TTSAA 2 cut(s) 613, 872
AleI CACNNNNGTG 1 cut(s) 794
Alw21I GWGCWC 2 cut(s) 204, 392
Alw26I GTCTC 1 cut(s) 290
AlwI GGATC 4 cut(s) 239, 252, 565, 578
Ama87I CYCGRG 2 cut(s) 293, 792
AoxI GGCC 3 cut(s) 93, 279, 882
ApoI RAATTY 1 cut(s) 652
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
Asp700I GAANNNNTTC 2 cut(s) 177, 348
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 3 cut(s) 765, 771, 883
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 4 cut(s) 221, 437, 466, 808
AvaI CYCGRG 2 cut(s) 293, 792
AvaII GGWCC 2 cut(s) 765, 771
BalI TGGCCA 1 cut(s) 281
BamHI GGATCC 2 cut(s) 244, 570
BanII GRGCYC 1 cut(s) 204
Bbv12I GWGCWC 2 cut(s) 204, 392
BccI CCATC 3 cut(s) 69, 104, 659
BcgI CGANNNNNNTGC 2 cut(s) 764, 798
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 2 cut(s) 353, 407
BfmI CTRYAG 1 cut(s) 382
BfoI RGCGCY 1 cut(s) 190
BglII AGATCT 2 cut(s) 175, 403
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 1 cut(s) 769
Bme18I GGWCC 2 cut(s) 765, 771
BmeT110I CYCGRG 2 cut(s) 293, 792
BmgT120I GGNCC 3 cut(s) 765, 771, 883
BmiI GGNNCC 4 cut(s) 246, 572, 766, 772
BmrFI CCNGG 1 cut(s) 769
BmrI ACTGGG 1 cut(s) 119
BmsI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
BmuI ACTGGG 1 cut(s) 119
BpmI CTGGAG 1 cut(s) 310
BpuEI CTTGAG 3 cut(s) 167, 212, 844
BpuMI CCSGG 1 cut(s) 769
BsaJI CCNNGG 3 cut(s) 48, 393, 631
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 1 cut(s) 333
Bse1I ACTGG 1 cut(s) 114
Bse3DI GCAATG 2 cut(s) 689, 757
BseDI CCNNGG 3 cut(s) 48, 393, 631
BseGI GGATG 4 cut(s) 5, 80, 670, 787
BseLI CCNNNNNNNGG 1 cut(s) 333
BseMI GCAATG 2 cut(s) 689, 757
BseMII CTCAG 2 cut(s) 189, 566
BseNI ACTGG 1 cut(s) 114
BshFI GGCC 3 cut(s) 95, 281, 884
BsiHKAI GWGCWC 2 cut(s) 204, 392
BsiHKCI CYCGRG 2 cut(s) 293, 792
BsiSI CCGG 1 cut(s) 768
BslFI GGGAC 7 cut(s) 94, 682, 778, 784, 833, 842, 914
BslI CCNNNNNNNGG 1 cut(s) 333
BsmAI GTCTC 1 cut(s) 290
BsmFI GGGAC 7 cut(s) 94, 682, 778, 784, 833, 842, 914
BsnI GGCC 3 cut(s) 95, 281, 884
BsoBI CYCGRG 2 cut(s) 293, 792
Bsp1286I GDGCHC 2 cut(s) 204, 392
Bsp143I GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
Bsp19I CCATGG 1 cut(s) 631
BspACI CCGC 4 cut(s) 224, 420, 433, 466
BspANI GGCC 3 cut(s) 95, 281, 884
BspCNI CTCAG 2 cut(s) 190, 567
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 4 cut(s) 246, 572, 766, 772
BspPI GGATC 4 cut(s) 239, 252, 565, 578
BspQI GCTCTTC 1 cut(s) 339
BsrBI CCGCTC 1 cut(s) 224
BsrDI GCAATG 2 cut(s) 689, 757
BsrI ACTGG 1 cut(s) 114
BssECI CCNNGG 3 cut(s) 48, 393, 631
BssMI GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
BssT1I CCWWGG 2 cut(s) 393, 631
Bst4CI ACNGT 3 cut(s) 233, 476, 860
Bst6I CTCTTC 1 cut(s) 339
BstC8I GCNNGC 1 cut(s) 437
BstDEI CTNAG 2 cut(s) 198, 575
BstDSI CCRYGG 1 cut(s) 631
BstF5I GGATG 4 cut(s) 5, 80, 670, 787
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 7 cut(s) 25, 178, 247, 256, 406, 486, 573
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
BstMWI GCNNNNNNNGC 3 cut(s) 269, 278, 387
BstNSI RCATGY 1 cut(s) 698
BstSCI CCNGG 1 cut(s) 767
BstSFI CTRYAG 1 cut(s) 382
BstX2I RGATCY 4 cut(s) 175, 244, 403, 570
BstYI RGATCY 4 cut(s) 175, 244, 403, 570
BsuRI GGCC 3 cut(s) 95, 281, 884
BtgI CCRYGG 1 cut(s) 631
BtsCI GGATG 4 cut(s) 5, 80, 670, 787
BtsIMutI CAGTG 1 cut(s) 865
Cac8I GCNNGC 1 cut(s) 437
CciI TCATGA 1 cut(s) 553
CfoI GCGC 1 cut(s) 189
Cfr13I GGNCC 3 cut(s) 765, 771, 883
Csp6I GTAC 2 cut(s) 579, 730
CviAII CATG 5 cut(s) 554, 601, 632, 695, 835
CviQI GTAC 2 cut(s) 579, 730
DdeI CTNAG 2 cut(s) 198, 575
DpnI GATC 7 cut(s) 24, 177, 246, 255, 405, 485, 572
DpnII GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 1 cut(s) 279
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
Ecl136II GAGCTC 1 cut(s) 202
Eco130I CCWWGG 2 cut(s) 393, 631
Eco24I GRGCYC 1 cut(s) 204
Eco32I GATATC 1 cut(s) 430
Eco47I GGWCC 2 cut(s) 765, 771
Eco53kI GAGCTC 1 cut(s) 202
Eco57I CTGAAG 2 cut(s) 363, 879
Eco88I CYCGRG 2 cut(s) 293, 792
EcoICRI GAGCTC 1 cut(s) 202
EcoRV GATATC 1 cut(s) 430
EcoT14I CCWWGG 2 cut(s) 393, 631
EcoT38I GRGCYC 1 cut(s) 204
ErhI CCWWGG 2 cut(s) 393, 631
FaeI CATG 5 cut(s) 557, 604, 635, 698, 838
FalI AAGNNNNNCTT 6 cut(s) 162, 194, 352, 384, 716, 748
FaqI GGGAC 7 cut(s) 94, 682, 778, 784, 833, 842, 914
FatI CATG 5 cut(s) 553, 600, 631, 694, 834
FokI GGATG 3 cut(s) 87, 677, 794
FriOI GRGCYC 1 cut(s) 204
FspBI CTAG 2 cut(s) 353, 407
GlaI GCGC 1 cut(s) 188
GsuI CTGGAG 1 cut(s) 310
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 3 cut(s) 95, 281, 884
HapII CCGG 1 cut(s) 768
HhaI GCGC 1 cut(s) 189
Hin1II CATG 5 cut(s) 557, 604, 635, 698, 838
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HindIII AAGCTT 2 cut(s) 366, 437
HinfI GANTC 1 cut(s) 194
HpaII CCGG 1 cut(s) 768
HphI GGTGA 4 cut(s) 221, 437, 466, 808
Hpy166II GTNNAC 2 cut(s) 229, 844
Hpy188I TCNGA 3 cut(s) 59, 199, 508
Hpy188III TCNNGA 9 cut(s) 20, 170, 257, 341, 524, 554, 574, 682, 869
Hpy8I GTNNAC 2 cut(s) 229, 844
HpyAV CCTTC 4 cut(s) 85, 679, 733, 922
HpyCH4III ACNGT 3 cut(s) 233, 476, 860
HpyCH4V TGCA 2 cut(s) 125, 694
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 278, 387
HpyF3I CTNAG 2 cut(s) 198, 575
Hsp92II CATG 5 cut(s) 557, 604, 635, 698, 838
HspAI GCGC 1 cut(s) 187
Kzo9I GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
LguI GCTCTTC 1 cut(s) 339
LmnI GCTCC 2 cut(s) 395, 585
LweI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
MaeI CTAG 2 cut(s) 353, 407
MaeIII GTNAC 2 cut(s) 454, 802
MalI GATC 7 cut(s) 24, 177, 246, 255, 405, 485, 572
MbiI CCGCTC 1 cut(s) 224
MboI GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
MboII GAAGA 8 cut(s) 170, 185, 356, 410, 413, 512, 569, 865
MflI RGATCY 4 cut(s) 175, 244, 403, 570
MhlI GDGCHC 2 cut(s) 204, 392
MlsI TGGCCA 1 cut(s) 281
MluCI AATT 2 cut(s) 561, 652
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 8 cut(s) 20, 43, 722, 801, 810, 819, 876, 926
Mox20I TGGCCA 1 cut(s) 281
MroXI GAANNNNTTC 2 cut(s) 177, 348
MscI TGGCCA 1 cut(s) 281
MseI TTAA 2 cut(s) 285, 549
MslI CAYNNNNRTG 3 cut(s) 120, 794, 836
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 2 cut(s) 251, 422
MspI CCGG 1 cut(s) 768
MspR9I CCNGG 1 cut(s) 769
MwoI GCNNNNNNNGC 3 cut(s) 269, 278, 387
NciI CCSGG 1 cut(s) 769
NcoI CCATGG 1 cut(s) 631
NdeII GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
NlaIII CATG 5 cut(s) 557, 604, 635, 698, 838
NlaIV GGNNCC 4 cut(s) 246, 572, 766, 772
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 1 cut(s) 454
NspI RCATGY 1 cut(s) 698
OliI CACNNNNGTG 1 cut(s) 794
PagI TCATGA 1 cut(s) 553
PciSI GCTCTTC 1 cut(s) 339
PdmI GAANNNNTTC 2 cut(s) 177, 348
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
Psp124BI GAGCTC 1 cut(s) 204
PspN4I GGNNCC 4 cut(s) 246, 572, 766, 772
PspPI GGNCC 3 cut(s) 765, 771, 883
PsuI RGATCY 4 cut(s) 175, 244, 403, 570
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 2 cut(s) 580, 731
RsaNI GTAC 2 cut(s) 579, 730
RseI CAYNNNNRTG 3 cut(s) 120, 794, 836
SacI GAGCTC 1 cut(s) 204
SapI GCTCTTC 1 cut(s) 339
SaqAI TTAA 2 cut(s) 285, 549
Sau3AI GATC 7 cut(s) 22, 175, 244, 253, 403, 483, 570
Sau96I GGNCC 3 cut(s) 765, 771, 883
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 769
SduI GDGCHC 2 cut(s) 204, 392
SfaNI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
SfcI CTRYAG 1 cut(s) 382
SinI GGWCC 2 cut(s) 765, 771
SmiMI CAYNNNNRTG 3 cut(s) 120, 794, 836
SmlI CTYRAG 3 cut(s) 182, 191, 823
SmoI CTYRAG 3 cut(s) 182, 191, 823
Sse9I AATT 2 cut(s) 561, 652
SsiI CCGC 4 cut(s) 224, 420, 433, 466
SspI AATATT 1 cut(s) 517
SspMI CTAG 2 cut(s) 353, 407
SstI GAGCTC 1 cut(s) 204
StyD4I CCNGG 1 cut(s) 767
StyI CCWWGG 2 cut(s) 393, 631
TaaI ACNGT 3 cut(s) 233, 476, 860
TaqI TCGA 2 cut(s) 318, 706
TaqII GACCGA 1 cut(s) 788
TasI AATT 2 cut(s) 561, 652
TatI WGTACW 2 cut(s) 578, 729
Tru1I TTAA 2 cut(s) 285, 549
Tru9I TTAA 2 cut(s) 285, 549
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 1 cut(s) 454
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 3 cut(s) 171, 504, 570
TspRI CASTG 1 cut(s) 865
VpaK11BI GGWCC 2 cut(s) 765, 771
XapI RAATTY 1 cut(s) 652
XceI RCATGY 1 cut(s) 698
XmnI GAANNNNTTC 2 cut(s) 177, 348
XspI CTAG 2 cut(s) 353, 407
ZrmI AGTACT 1 cut(s) 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.