pycom02g24600

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0001318
Physical Location & Seq
Forward (+)
22746551 .. 22748484
1934 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g24600.4

Sequence Viewer

Length: 942 bp
ATGGCTACACTAATTGCTTCTGAAAACTTCTCTCCCATTGAAGATGCCGAAGTTCTTCGAAAATCCGTGAAAGGATGGGGGACTGATGAGAAGGCTATAATCTCTATTCTGGGACACAGAAATGCAGCACAGAGAAAGCAAATCAGGCTTGCTTATGAGCAGTCTTATCAAGAAGATCTTCTCAAACGCCTTGAATCCGAGCTTTCTGGGGATTTTGAGAAAGCTGTGTACCGTTGGATCTTGGATCCTGCAGATCGAGATGCTGTTTTGGCTCATGTGGCCATCAAGAAATCTGGGTGTAACTACAATGTCATCATCGAAATTGCAACCATACTATCTCCTGAAGATCTCTTTGCAGTAAGGAAAGCTTACCAAGTTCGCTACAAGCACTCCTTGGAGGAGGACTTGGCTGCCCACACCACTGGTGATATCCGCAAGCTTCTGGTTGCTTTAGTGACTGCGTATCGTTATGACGGTAGCGAGATCAATGCAAAATTGGCAAAATCGGAAGCTGATATTTTTCATGATGCTATCAAAGACAAGGCTTTCAATCATGATGAAATTATTAGGATCCTCAGTACTAGGAGCAAGACTCAGCTCATGGCAACCTTTAACCACTACAGAGATCACCATAAAATTTCCATCAGTAAGACTTTGTTGGAAGACGGTGCTGATGATTTCCAGAAGGCACTGCATGTAGTCATCAGATGCCTCAATGACCACAAGAAGTACTTTGAGAAGGTTCTTCGCAACGCTATCAGGAGGCTTGGGACCGATGAGGATGCTCTCACTCATGTGATTGTGACGAGGGCTGAGAGGGACTTGAAGGACATCAAGGAGGTTTACTACAAGAAGAACAGCGTTCCTCTTGAACATGCTGTGGCCAAAGACACTTCCGGGGATTACAAGGACTTCCTCCTTACTCTGTTGGGGACGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

314

Amino Acids

35.74

Weight (kDa)

6.68

Isoelectric Point (pI)

35.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 433
AclWI GGATC 5 cut(s) 239, 245, 252, 565, 578
AcoI YGGCCR 2 cut(s) 279, 882
AcsI RAATTY 1 cut(s) 636
AcuI CTGAAG 1 cut(s) 363
AfaI GTAC 3 cut(s) 230, 580, 731
AgsI TTSAA 5 cut(s) 41, 194, 550, 826, 872
AleI CACNNNNGTG 1 cut(s) 794
AluBI AGCT 6 cut(s) 202, 224, 368, 439, 512, 598
AluI AGCT 6 cut(s) 202, 224, 368, 439, 512, 598
AlwI GGATC 5 cut(s) 239, 245, 252, 565, 578
AoxI GGCC 2 cut(s) 279, 882
ApeKI GCWGC 2 cut(s) 125, 410
ApoI RAATTY 1 cut(s) 636
Asp700I GAANNNNTTC 2 cut(s) 54, 177
AspS9I GGNCC 1 cut(s) 771
AsuC2I CCSGG 1 cut(s) 898
AsuHPI GGTGA 2 cut(s) 437, 620
AsuII TTCGAA 1 cut(s) 58
AvaII GGWCC 1 cut(s) 771
BalI TGGCCA 2 cut(s) 281, 884
BamHI GGATCC 2 cut(s) 244, 570
BbsI GAAGAC 1 cut(s) 669
BbvI GCAGC 2 cut(s) 137, 397
BccI CCATC 3 cut(s) 69, 290, 650
BcgI CGANNNNNNTGC 4 cut(s) 470, 504, 764, 798
BcnI CCSGG 1 cut(s) 898
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 2 cut(s) 249, 619
BglII AGATCT 2 cut(s) 175, 346
BisI GCNGC 2 cut(s) 126, 411
BlsI GCNGC 2 cut(s) 127, 412
BmcAI AGTACT 2 cut(s) 580, 731
Bme1390I CCNGG 1 cut(s) 898
Bme18I GGWCC 1 cut(s) 771
BmgT120I GGNCC 1 cut(s) 771
BmiI GGNNCC 3 cut(s) 246, 572, 772
BmrFI CCNGG 1 cut(s) 898
BmsI GCATC 5 cut(s) 34, 250, 517, 698, 772
BpiI GAAGAC 1 cut(s) 669
BplI GAGNNNNNCTC 2 cut(s) 577, 609
Bpu14I TTCGAA 1 cut(s) 58
BpuMI CCSGG 1 cut(s) 898
BsaJI CCNNGG 2 cut(s) 393, 897
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bse1I ACTGG 1 cut(s) 427
BseDI CCNNGG 2 cut(s) 393, 897
BseGI GGATG 2 cut(s) 80, 787
BseMII CTCAG 3 cut(s) 589, 608, 804
BseNI ACTGG 1 cut(s) 427
BseRI GAGGAG 1 cut(s) 413
BseXI GCAGC 2 cut(s) 137, 397
BshFI GGCC 2 cut(s) 281, 884
BsiSI CCGG 1 cut(s) 897
BslFI GGGAC 4 cut(s) 94, 126, 784, 833
BsmFI GGGAC 4 cut(s) 94, 126, 784, 833
BsnI GGCC 2 cut(s) 281, 884
Bsp119I TTCGAA 1 cut(s) 58
Bsp143I GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
BspACI CCGC 1 cut(s) 433
BspANI GGCC 2 cut(s) 281, 884
BspCNI CTCAG 3 cut(s) 588, 607, 805
BspHI TCATGA 2 cut(s) 523, 553
BspLI GGNNCC 3 cut(s) 246, 572, 772
BspMAI CTGCAG 1 cut(s) 253
BspPI GGATC 5 cut(s) 239, 245, 252, 565, 578
BspT104I TTCGAA 1 cut(s) 58
BsrI ACTGG 1 cut(s) 427
BssECI CCNNGG 2 cut(s) 393, 897
BssMI GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
BssT1I CCWWGG 1 cut(s) 393
Bst4CI ACNGT 3 cut(s) 233, 476, 668
BstBI TTCGAA 1 cut(s) 58
BstC8I GCNNGC 2 cut(s) 150, 437
BstDEI CTNAG 3 cut(s) 575, 594, 813
BstF5I GGATG 2 cut(s) 80, 787
BstKTI GATC 8 cut(s) 178, 240, 247, 256, 349, 486, 573, 628
BstMBI GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
BstMWI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
BstNSI RCATGY 2 cut(s) 698, 878
BstSCI CCNGG 1 cut(s) 896
BstSFI CTRYAG 2 cut(s) 249, 619
BstV1I GCAGC 2 cut(s) 137, 397
BstV2I GAAGAC 1 cut(s) 669
BstX2I RGATCY 5 cut(s) 175, 237, 244, 346, 570
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 5 cut(s) 175, 237, 244, 346, 570
BsuRI GGCC 2 cut(s) 281, 884
BtsCI GGATG 2 cut(s) 80, 787
BtsI GCAGTG 1 cut(s) 689
BtsIMutI CAGTG 2 cut(s) 420, 689
Cac8I GCNNGC 2 cut(s) 150, 437
CciI TCATGA 2 cut(s) 523, 553
Cfr13I GGNCC 1 cut(s) 771
Csp6I GTAC 3 cut(s) 229, 579, 730
CviAII CATG 7 cut(s) 275, 524, 554, 601, 695, 794, 875
CviQI GTAC 3 cut(s) 229, 579, 730
DdeI CTNAG 3 cut(s) 575, 594, 813
DpnI GATC 8 cut(s) 177, 239, 246, 255, 348, 485, 572, 627
DpnII GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
EaeI YGGCCR 2 cut(s) 279, 882
Eco130I CCWWGG 1 cut(s) 393
Eco32I GATATC 1 cut(s) 430
Eco47I GGWCC 1 cut(s) 771
Eco57I CTGAAG 1 cut(s) 363
EcoRV GATATC 1 cut(s) 430
EcoT14I CCWWGG 1 cut(s) 393
ErhI CCWWGG 1 cut(s) 393
FaeI CATG 7 cut(s) 278, 527, 557, 604, 698, 797, 878
FalI AAGNNNNNCTT 8 cut(s) 162, 194, 352, 384, 377, 409, 716, 748
FaqI GGGAC 4 cut(s) 94, 126, 784, 833
FatI CATG 7 cut(s) 274, 523, 553, 600, 694, 793, 874
Fnu4HI GCNGC 2 cut(s) 126, 411
FokI GGATG 2 cut(s) 87, 794
Fsp4HI GCNGC 2 cut(s) 126, 411
FspBI CTAG 1 cut(s) 582
GluI GCNGC 2 cut(s) 126, 411
HaeIII GGCC 2 cut(s) 281, 884
HapII CCGG 1 cut(s) 897
Hin1II CATG 7 cut(s) 278, 527, 557, 604, 698, 797, 878
HindIII AAGCTT 2 cut(s) 366, 437
HinfI GANTC 2 cut(s) 194, 592
HpaII CCGG 1 cut(s) 897
HphI GGTGA 2 cut(s) 437, 620
Hpy166II GTNNAC 2 cut(s) 229, 844
Hpy188I TCNGA 4 cut(s) 22, 199, 508, 707
Hpy188III TCNNGA 9 cut(s) 170, 257, 286, 341, 524, 554, 682, 760, 869
Hpy8I GTNNAC 2 cut(s) 229, 844
HpyAV CCTTC 4 cut(s) 85, 679, 733, 820
HpyCH4III ACNGT 3 cut(s) 233, 476, 668
HpyCH4V TGCA 6 cut(s) 125, 251, 326, 356, 491, 694
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
HpyF3I CTNAG 3 cut(s) 575, 594, 813
Hsp92II CATG 7 cut(s) 278, 527, 557, 604, 698, 797, 878
Kzo9I GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
LmnI GCTCC 1 cut(s) 585
Lsp1109I GCAGC 2 cut(s) 137, 397
LweI GCATC 5 cut(s) 34, 250, 517, 698, 772
MaeI CTAG 1 cut(s) 582
MaeIII GTNAC 3 cut(s) 299, 454, 802
MalI GATC 8 cut(s) 177, 239, 246, 255, 348, 485, 572, 627
MboI GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
MboII GAAGA 8 cut(s) 47, 53, 170, 185, 356, 674, 737, 865
MflI RGATCY 5 cut(s) 175, 237, 244, 346, 570
MlsI TGGCCA 2 cut(s) 281, 884
MluCI AATT 5 cut(s) 12, 321, 494, 561, 636
MluNI TGGCCA 2 cut(s) 281, 884
MlyI GAGTC 1 cut(s) 586
MmeI TCCRAC 2 cut(s) 215, 639
Mox20I TGGCCA 2 cut(s) 281, 884
MroXI GAANNNNTTC 2 cut(s) 54, 177
MscI TGGCCA 2 cut(s) 281, 884
MseI TTAA 1 cut(s) 612
MslI CAYNNNNRTG 2 cut(s) 120, 794
Msp20I TGGCCA 2 cut(s) 281, 884
MspI CCGG 1 cut(s) 897
MspR9I CCNGG 1 cut(s) 898
MwoI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
NciI CCSGG 1 cut(s) 898
NdeII GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
NlaIII CATG 7 cut(s) 278, 527, 557, 604, 698, 797, 878
NlaIV GGNNCC 3 cut(s) 246, 572, 772
NmuCI GTSAC 2 cut(s) 454, 802
NspI RCATGY 2 cut(s) 698, 878
NspV TTCGAA 1 cut(s) 58
OliI CACNNNNGTG 1 cut(s) 794
PagI TCATGA 2 cut(s) 523, 553
PdmI GAANNNNTTC 2 cut(s) 54, 177
PfeI GAWTC 1 cut(s) 194
PkrI GCNGC 2 cut(s) 127, 412
PleI GAGTC 1 cut(s) 586
PpsI GAGTC 1 cut(s) 586
PspN4I GGNNCC 3 cut(s) 246, 572, 772
PspPI GGNCC 1 cut(s) 771
PstI CTGCAG 1 cut(s) 253
PsuI RGATCY 5 cut(s) 175, 237, 244, 346, 570
RsaI GTAC 3 cut(s) 230, 580, 731
RsaNI GTAC 3 cut(s) 229, 579, 730
RseI CAYNNNNRTG 2 cut(s) 120, 794
SaqAI TTAA 1 cut(s) 612
SatI GCNGC 2 cut(s) 126, 411
Sau3AI GATC 8 cut(s) 175, 237, 244, 253, 346, 483, 570, 625
Sau96I GGNCC 1 cut(s) 771
ScaI AGTACT 2 cut(s) 580, 731
SchI GAGTC 1 cut(s) 586
ScrFI CCNGG 1 cut(s) 898
SetI ASST 9 cut(s) 204, 226, 370, 441, 514, 600, 611, 744, 843
SfaNI GCATC 5 cut(s) 34, 250, 517, 698, 772
SfcI CTRYAG 2 cut(s) 249, 619
SfuI TTCGAA 1 cut(s) 58
SinI GGWCC 1 cut(s) 771
SmiMI CAYNNNNRTG 2 cut(s) 120, 794
Sse9I AATT 5 cut(s) 12, 321, 494, 561, 636
SsiI CCGC 1 cut(s) 433
SspMI CTAG 1 cut(s) 582
StyD4I CCNGG 1 cut(s) 896
StyI CCWWGG 1 cut(s) 393
TaaI ACNGT 3 cut(s) 233, 476, 668
TaqI TCGA 3 cut(s) 58, 256, 318
TaqII GACCGA 1 cut(s) 788
TasI AATT 5 cut(s) 12, 321, 494, 561, 636
TatI WGTACW 2 cut(s) 578, 729
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 612
Tru9I TTAA 1 cut(s) 612
TscAI CASTG 2 cut(s) 427, 696
TseFI GTSAC 2 cut(s) 454, 802
TseI GCWGC 2 cut(s) 125, 410
Tsp45I GTSAC 2 cut(s) 454, 802
TspDTI ATGAA 2 cut(s) 512, 573
TspGWI ACGGA 1 cut(s) 55
TspRI CASTG 2 cut(s) 427, 696
VpaK11BI GGWCC 1 cut(s) 771
XapI RAATTY 1 cut(s) 636
XceI RCATGY 2 cut(s) 698, 878
XmnI GAANNNNTTC 2 cut(s) 54, 177
XspI CTAG 1 cut(s) 582
ZrmI AGTACT 2 cut(s) 580, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.