Rh1AG045600

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0001318
Physical Location & Seq
Reverse (-)
7775983 .. 7777776
1794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG045600.1

Sequence Viewer

Length: 915 bp
ATGGCTACCCTTGTTTCTCCTCCAAATTTCTCAGCCAATGAAGATGCAGAAGCTCTTCGAATATCTGTTAAAGGTTGGGGGACTAATGAGAAGGCTATCATCTCCATCCTGGGTCATAGAATTGCAGGTCAAAGAAAAGAGATCAGGGCAGCTTATGAACAACTTTATCAAGAAGATCTAATCAAGCGCCTTGAGTCTGAGCTCTCTGGAGATTTTGAGAGAGCGATGTACCGTTGGATATTGGATCCAGCAGATCGTGATGCAGTTTTGGCTAATGTGGCCATCAAGAAATCCAACACTGACTACAATGTCATCATAGAAATGTCCTGCGTTCACTCTCCTGAAGAGCTCCTAGCTGTAAGAAGAGCTTACCAGCTTCGCTACAAGCACTCGTTGGAAGAAGATCTAGCTGCACATACCACCGGTGATATGCGCAAGCTTTTGGTTGCTTTGGTGACTGCTTACCGTTATGACGGTAATGAGATCAATGCAAAGTTGGCAAATTCAGAAGCTGATATTCTTCATGATGCTATCAAAGACAAGGCTTTCAATCATGAAGAAATTATCAGGATCCTGAGTACAAGAAGCAAGACACAGCTCATGGCTACATTCAACAAATACAGAGATGATCAGGGCATTTCTATCAGCAAGGCTTTGTTGGATGAGGAAGCTAATGATTTCCAGAAGGCATTGCACACAGCCATTCGATGCCTCAATGACCCCAAGAAGTACTTTGAGAAGACAGATGAGGATGCTCTCACTCGTGTAATTGTTACAAGGGCAGAGAGGGACTTGAGGGACATCAAGGAGGTTTACTACAAGAAGAACAGTGTTCCTCTTGAACAGGCTGTGGCCAAAGACACTTCAGGAGACTATAAGGCCTTCCTCCTTACTCTGTTGGGAAAGGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

304

Amino Acids

34.64

Weight (kDa)

5.77

Isoelectric Point (pI)

36.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 15 - 76 3.7e-21 Annexin
Annexin PF00191 87 - 151 8.1e-15 Annexin
Annexin PF00191 170 - 232 8.9e-12 Annexin
Annexin PF00191 248 - 299 4.9e-13 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
Acc16I TGCGCA 1 cut(s) 434
Acc36I ACCTGC 1 cut(s) 116
AclWI GGATC 4 cut(s) 239, 252, 565, 578
AcoI YGGCCR 2 cut(s) 279, 852
AcsI RAATTY 2 cut(s) 25, 502
AcuI CTGAAG 2 cut(s) 363, 849
AfaI GTAC 3 cut(s) 230, 580, 731
AgeI ACCGGT 1 cut(s) 422
AgsI TTSAA 3 cut(s) 550, 613, 842
AjnI CCWGG 1 cut(s) 108
Alw21I GWGCWC 2 cut(s) 204, 351
Alw26I GTCTC 1 cut(s) 864
AlwI GGATC 4 cut(s) 239, 252, 565, 578
AlwNI CAGNNNCTG 1 cut(s) 512
AoxI GGCC 3 cut(s) 279, 852, 879
ApeKI GCWGC 2 cut(s) 149, 410
ApoI RAATTY 2 cut(s) 25, 502
AsiGI ACCGGT 1 cut(s) 422
Asp700I GAANNNNTTC 1 cut(s) 54
AspLEI GCGC 2 cut(s) 189, 435
AsuHPI GGTGA 2 cut(s) 437, 466
AsuII TTCGAA 1 cut(s) 58
BalI TGGCCA 2 cut(s) 281, 854
BamHI GGATCC 2 cut(s) 244, 570
BanII GRGCYC 2 cut(s) 204, 351
BauI CACGAG 1 cut(s) 762
BbsI GAAGAC 1 cut(s) 746
Bbv12I GWGCWC 2 cut(s) 204, 351
BbvI GCAGC 2 cut(s) 161, 397
BccI CCATC 2 cut(s) 113, 290
BciT130I CCWGG 1 cut(s) 110
BclI TGATCA 1 cut(s) 628
BcoDI GTCTC 1 cut(s) 864
BfaI CTAG 2 cut(s) 353, 407
BfoI RGCGCY 1 cut(s) 190
BfuAI ACCTGC 1 cut(s) 116
BglII AGATCT 2 cut(s) 175, 403
BisI GCNGC 2 cut(s) 150, 411
BlsI GCNGC 2 cut(s) 151, 412
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 1 cut(s) 110
BmiI GGNNCC 2 cut(s) 246, 572
BmrFI CCNGG 1 cut(s) 110
BmsI GCATC 5 cut(s) 34, 250, 517, 698, 742
BpiI GAAGAC 1 cut(s) 746
BpmI CTGGAG 1 cut(s) 228
Bpu14I TTCGAA 1 cut(s) 58
BpuEI CTTGAG 2 cut(s) 212, 814
BsaJI CCNNGG 1 cut(s) 109
BsaWI WCCGGW 1 cut(s) 422
Bse118I RCCGGY 1 cut(s) 422
Bse3DI GCAATG 1 cut(s) 689
BseBI CCWGG 1 cut(s) 110
BseDI CCNNGG 1 cut(s) 109
BseGI GGATG 3 cut(s) 105, 667, 757
BseMI GCAATG 1 cut(s) 689
BseMII CTCAG 3 cut(s) 45, 189, 566
BseRI GAGGAG 1 cut(s) 9
BseXI GCAGC 2 cut(s) 161, 397
BsgI GTGCAG 1 cut(s) 396
BshFI GGCC 3 cut(s) 281, 854, 881
BshTI ACCGGT 1 cut(s) 422
BsiHKAI GWGCWC 2 cut(s) 204, 351
BsiSI CCGG 1 cut(s) 423
BslFI GGGAC 3 cut(s) 94, 803, 812
BsmAI GTCTC 1 cut(s) 864
BsmFI GGGAC 3 cut(s) 94, 803, 812
BsnI GGCC 3 cut(s) 281, 854, 881
Bsp119I TTCGAA 1 cut(s) 58
Bsp1286I GDGCHC 2 cut(s) 204, 351
Bsp143I GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
BspANI GGCC 3 cut(s) 281, 854, 881
BspCNI CTCAG 3 cut(s) 44, 190, 567
BspHI TCATGA 2 cut(s) 523, 553
BspLI GGNNCC 2 cut(s) 246, 572
BspMI ACCTGC 1 cut(s) 116
BspPI GGATC 4 cut(s) 239, 252, 565, 578
BspQI GCTCTTC 3 cut(s) 60, 339, 358
BspT104I TTCGAA 1 cut(s) 58
BsrDI GCAATG 1 cut(s) 689
BsrFI RCCGGY 1 cut(s) 422
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 1 cut(s) 109
BssMI GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
BssSI CACGAG 1 cut(s) 762
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 110
Bst4CI ACNGT 4 cut(s) 233, 467, 476, 830
Bst6I CTCTTC 3 cut(s) 60, 339, 358
BstBI TTCGAA 1 cut(s) 58
BstC8I GCNNGC 1 cut(s) 437
BstDEI CTNAG 3 cut(s) 31, 198, 575
BstF5I GGATG 3 cut(s) 105, 667, 757
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 2 cut(s) 189, 435
BstKTI GATC 8 cut(s) 144, 178, 247, 256, 406, 486, 573, 631
BstMAI GTCTC 1 cut(s) 864
BstMBI GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
BstMWI GCNNNNNNNGC 3 cut(s) 269, 278, 497
BstNI CCWGG 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 108
BstV1I GCAGC 2 cut(s) 161, 397
BstV2I GAAGAC 1 cut(s) 746
BstX2I RGATCY 4 cut(s) 175, 244, 403, 570
BstYI RGATCY 4 cut(s) 175, 244, 403, 570
BsuRI GGCC 3 cut(s) 281, 854, 881
BtgZI GCGATG 1 cut(s) 239
BtsCI GGATG 3 cut(s) 105, 667, 757
BtsIMutI CAGTG 2 cut(s) 297, 835
BveI ACCTGC 1 cut(s) 116
Cac8I GCNNGC 1 cut(s) 437
CaiI CAGNNNCTG 1 cut(s) 512
CciI TCATGA 2 cut(s) 523, 553
CfoI GCGC 2 cut(s) 189, 435
Cfr10I RCCGGY 1 cut(s) 422
Csp6I GTAC 3 cut(s) 229, 579, 730
CspAI ACCGGT 1 cut(s) 422
CviAII CATG 3 cut(s) 524, 554, 601
CviQI GTAC 3 cut(s) 229, 579, 730
DdeI CTNAG 3 cut(s) 31, 198, 575
DpnI GATC 8 cut(s) 143, 177, 246, 255, 405, 485, 572, 630
DpnII GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 2 cut(s) 279, 852
Eam1104I CTCTTC 3 cut(s) 60, 339, 358
EarI CTCTTC 3 cut(s) 60, 339, 358
Ecl136II GAGCTC 2 cut(s) 202, 349
Eco147I AGGCCT 1 cut(s) 881
Eco24I GRGCYC 2 cut(s) 204, 351
Eco53kI GAGCTC 2 cut(s) 202, 349
Eco57I CTGAAG 2 cut(s) 363, 849
EcoICRI GAGCTC 2 cut(s) 202, 349
EcoRII CCWGG 1 cut(s) 108
EcoT38I GRGCYC 2 cut(s) 204, 351
FaeI CATG 3 cut(s) 527, 557, 604
FalI AAGNNNNNCTT 4 cut(s) 352, 384, 716, 748
FaqI GGGAC 3 cut(s) 94, 803, 812
FatI CATG 3 cut(s) 523, 553, 600
FbaI TGATCA 1 cut(s) 628
Fnu4HI GCNGC 2 cut(s) 150, 411
FokI GGATG 3 cut(s) 92, 674, 764
FriOI GRGCYC 2 cut(s) 204, 351
Fsp4HI GCNGC 2 cut(s) 150, 411
FspBI CTAG 2 cut(s) 353, 407
FspI TGCGCA 1 cut(s) 434
GlaI GCGC 2 cut(s) 188, 434
GluI GCNGC 2 cut(s) 150, 411
GsuI CTGGAG 1 cut(s) 228
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 3 cut(s) 281, 854, 881
HapII CCGG 1 cut(s) 423
HhaI GCGC 2 cut(s) 189, 435
Hin1II CATG 3 cut(s) 527, 557, 604
Hin6I GCGC 2 cut(s) 187, 433
HinP1I GCGC 2 cut(s) 187, 433
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 1 cut(s) 194
HpaII CCGG 1 cut(s) 423
HphI GGTGA 2 cut(s) 437, 466
Hpy166II GTNNAC 2 cut(s) 334, 814
Hpy188I TCNGA 2 cut(s) 199, 508
Hpy8I GTNNAC 2 cut(s) 334, 814
HpyAV CCTTC 3 cut(s) 85, 679, 892
HpyCH4III ACNGT 4 cut(s) 233, 467, 476, 830
HpyCH4V TGCA 6 cut(s) 47, 125, 263, 413, 491, 694
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 278, 497
HpyF3I CTNAG 3 cut(s) 31, 198, 575
Hsp92II CATG 3 cut(s) 527, 557, 604
HspAI GCGC 2 cut(s) 187, 433
Ksp22I TGATCA 1 cut(s) 628
Kzo9I GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
LguI GCTCTTC 3 cut(s) 60, 339, 358
LmnI GCTCC 1 cut(s) 354
Lsp1109I GCAGC 2 cut(s) 161, 397
LweI GCATC 5 cut(s) 34, 250, 517, 698, 742
MaeI CTAG 2 cut(s) 353, 407
MaeIII GTNAC 2 cut(s) 454, 772
MalI GATC 8 cut(s) 143, 177, 246, 255, 405, 485, 572, 630
MboI GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
MflI RGATCY 4 cut(s) 175, 244, 403, 570
MhlI GDGCHC 2 cut(s) 204, 351
MlsI TGGCCA 2 cut(s) 281, 854
MluCI AATT 5 cut(s) 25, 120, 502, 561, 768
MluNI TGGCCA 2 cut(s) 281, 854
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 4 cut(s) 215, 318, 375, 639
MnlI CCTC 9 cut(s) 30, 658, 722, 742, 780, 789, 802, 846, 896
Mox20I TGGCCA 2 cut(s) 281, 854
MroXI GAANNNNTTC 1 cut(s) 54
MscI TGGCCA 2 cut(s) 281, 854
MseI TTAA 1 cut(s) 69
MslI CAYNNNNRTG 1 cut(s) 320
Msp20I TGGCCA 2 cut(s) 281, 854
MspI CCGG 1 cut(s) 423
MspR9I CCNGG 1 cut(s) 110
MvaI CCWGG 1 cut(s) 110
MwoI GCNNNNNNNGC 3 cut(s) 269, 278, 497
NdeII GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
NlaIII CATG 3 cut(s) 527, 557, 604
NlaIV GGNNCC 2 cut(s) 246, 572
NmuCI GTSAC 1 cut(s) 454
NsbI TGCGCA 1 cut(s) 434
NspV TTCGAA 1 cut(s) 58
PagI TCATGA 2 cut(s) 523, 553
PceI AGGCCT 1 cut(s) 881
PciSI GCTCTTC 3 cut(s) 60, 339, 358
PdmI GAANNNNTTC 1 cut(s) 54
PinAI ACCGGT 1 cut(s) 422
PkrI GCNGC 2 cut(s) 151, 412
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
Psp124BI GAGCTC 2 cut(s) 204, 351
Psp6I CCWGG 1 cut(s) 108
PspGI CCWGG 1 cut(s) 108
PspN4I GGNNCC 2 cut(s) 246, 572
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 4 cut(s) 175, 244, 403, 570
RsaI GTAC 3 cut(s) 230, 580, 731
RsaNI GTAC 3 cut(s) 229, 579, 730
RseI CAYNNNNRTG 1 cut(s) 320
SacI GAGCTC 2 cut(s) 204, 351
SapI GCTCTTC 3 cut(s) 60, 339, 358
SaqAI TTAA 1 cut(s) 69
SatI GCNGC 2 cut(s) 150, 411
Sau3AI GATC 8 cut(s) 141, 175, 244, 253, 403, 483, 570, 628
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 110
SduI GDGCHC 2 cut(s) 204, 351
SfaNI GCATC 5 cut(s) 34, 250, 517, 698, 742
SfuI TTCGAA 1 cut(s) 58
SgrAI CRCCGGYG 1 cut(s) 422
SmiMI CAYNNNNRTG 1 cut(s) 320
SmlI CTYRAG 2 cut(s) 191, 793
SmoI CTYRAG 2 cut(s) 191, 793
Sse9I AATT 5 cut(s) 25, 120, 502, 561, 768
SseBI AGGCCT 1 cut(s) 881
SspMI CTAG 2 cut(s) 353, 407
SstI GAGCTC 2 cut(s) 204, 351
StuI AGGCCT 1 cut(s) 881
StyD4I CCNGG 1 cut(s) 108
TaaI ACNGT 4 cut(s) 233, 467, 476, 830
TaqI TCGA 2 cut(s) 58, 706
TasI AATT 5 cut(s) 25, 120, 502, 561, 768
TatI WGTACW 2 cut(s) 578, 729
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TscAI CASTG 2 cut(s) 304, 835
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 2 cut(s) 149, 410
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 4 cut(s) 54, 171, 512, 570
TspRI CASTG 2 cut(s) 304, 835
XapI RAATTY 2 cut(s) 25, 502
XmnI GAANNNNTTC 1 cut(s) 54
XspI CTAG 2 cut(s) 353, 407
ZrmI AGTACT 1 cut(s) 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.