pycom07g02500

Annexin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0001318
Physical Location & Seq
Reverse (-)
2047321 .. 2049473
2153 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02500.4

Sequence Viewer

Length: 945 bp
ATGGCTACCCTTATTGCTCTTGAAAACTTCTCTCCCGTTGACGATGCTGAAGTTCTTCGAAACTCTGTGAAAGGATGGGGGACTGATGAGAAGGCTATAATCTCTATACTGGGACATAGAAACGCAGCACAGAGAAAGCAAATCAGGCTTGCTTACGAGCAATCTTATCATGACGATCTTCTCAAGCGCCTTGAGTCCGAGCTCTCTGGGGATTTTGAGAAAGCGATGTACCGTTGGATCTTGGATCCTGCAGATCGAGATGCTGTTTTGGCTCATGTGGCCATCAAGAAATCTGAGTGTAACTACAATGTCATCATCGAGATTGCAACCATTCTATCTCCTGAAGAGCTCCTTGCAGTAAGGAAGGCTTACCAAGTTCGCTACAAGCACTCCTTGGAGGAAGACTTGGCTACACACACCACTGGTGATATCCGCAAGCTTTTGGTTGCTTTAGTGACTGCGTATCGTTATGATGGTTGTGAGATCAATGCAAAACTGGCCAATTCGGAAGCTGATATTCTTCATGATGCTATCAAAGACAAGGCTTTCAATCATGATGAAGTTATTAGGATCCTCAGTACTAGGAGCAAGACTCAGCTCATGGCAACCTTTAATCGCTACCGAGATGACCATGGCACTTCCATCAGTAAGAGTTTGTTGGAAGAGGGTGGTAATGGTCTCCAGAAGGCACTGCATGTAGCCATCCGATGCCTCAATGACCCCAAGAAGTACTTTGAGAAGGTTCTTCGCAATGCAATCAAGAGGGTTGGAACTGATGAGGATGCTCTCACTCGTGTGATTGTGACAAGGGCCGAGAGGGACTTGAAAGACATCAAAGAGGTTTACTACAAGAAGAACAACGTTTCTCTCGACCATGCTGTGGCCAAAGAAACTTCCGGGGATTACAAGGACTTCCTCCTTACTCTGCTGGGGAAGGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

315

Amino Acids

35.66

Weight (kDa)

6.39

Isoelectric Point (pI)

32.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 880
AciI CCGC 1 cut(s) 433
AclI AACGTT 1 cut(s) 861
AclWI GGATC 5 cut(s) 239, 245, 252, 565, 578
AcoI YGGCCR 3 cut(s) 279, 498, 882
AcuI CTGAAG 2 cut(s) 69, 363
AfaI GTAC 3 cut(s) 230, 580, 731
AfiI CCNNNNNNNGG 1 cut(s) 880
AgsI TTSAA 3 cut(s) 23, 550, 826
AleI CACNNNNGTG 1 cut(s) 794
AluBI AGCT 5 cut(s) 202, 349, 439, 512, 598
AluI AGCT 5 cut(s) 202, 349, 439, 512, 598
Alw21I GWGCWC 2 cut(s) 204, 351
Alw26I GTCTC 1 cut(s) 683
AlwI GGATC 5 cut(s) 239, 245, 252, 565, 578
AoxI GGCC 4 cut(s) 279, 498, 810, 882
ApeKI GCWGC 1 cut(s) 125
Asp700I GAANNNNTTC 1 cut(s) 54
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 1 cut(s) 810
AsuC2I CCSGG 1 cut(s) 898
AsuHPI GGTGA 1 cut(s) 437
AsuII TTCGAA 1 cut(s) 58
BalI TGGCCA 3 cut(s) 281, 500, 884
BamHI GGATCC 2 cut(s) 244, 570
BanII GRGCYC 2 cut(s) 204, 351
BauI CACGAG 1 cut(s) 792
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 2 cut(s) 204, 351
BbvI GCAGC 1 cut(s) 137
BccI CCATC 5 cut(s) 69, 290, 467, 650, 710
BcnI CCSGG 1 cut(s) 898
BcoDI GTCTC 1 cut(s) 683
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 1 cut(s) 249
BfoI RGCGCY 1 cut(s) 190
BisI GCNGC 1 cut(s) 126
BlsI GCNGC 1 cut(s) 127
BmcAI AGTACT 2 cut(s) 580, 731
Bme1390I CCNGG 1 cut(s) 898
BmgT120I GGNCC 1 cut(s) 810
BmiI GGNNCC 2 cut(s) 246, 572
BmrFI CCNGG 1 cut(s) 898
BmrI ACTGGG 1 cut(s) 119
BmsI GCATC 5 cut(s) 34, 250, 517, 698, 772
BmuI ACTGGG 1 cut(s) 119
BpiI GAAGAC 1 cut(s) 408
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 1 cut(s) 665
Bpu14I TTCGAA 1 cut(s) 58
BpuEI CTTGAG 2 cut(s) 167, 212
BpuMI CCSGG 1 cut(s) 898
BsaI GGTCTC 1 cut(s) 683
BsaJI CCNNGG 3 cut(s) 393, 631, 897
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 1 cut(s) 880
Bse1I ACTGG 3 cut(s) 114, 427, 501
Bse3DI GCAATG 1 cut(s) 757
BseDI CCNNGG 3 cut(s) 393, 631, 897
BseGI GGATG 3 cut(s) 80, 702, 787
BseLI CCNNNNNNNGG 1 cut(s) 880
BseMI GCAATG 1 cut(s) 757
BseMII CTCAG 3 cut(s) 285, 589, 608
BseNI ACTGG 3 cut(s) 114, 427, 501
BseXI GCAGC 1 cut(s) 137
BseYI CCCAGC 1 cut(s) 928
BshFI GGCC 4 cut(s) 281, 500, 812, 884
BsiHKAI GWGCWC 2 cut(s) 204, 351
BsiSI CCGG 1 cut(s) 897
BslFI GGGAC 3 cut(s) 94, 126, 833
BslI CCNNNNNNNGG 1 cut(s) 880
BsmAI GTCTC 1 cut(s) 683
BsmFI GGGAC 3 cut(s) 94, 126, 833
BsnI GGCC 4 cut(s) 281, 500, 812, 884
Bso31I GGTCTC 1 cut(s) 683
Bsp119I TTCGAA 1 cut(s) 58
Bsp1286I GDGCHC 2 cut(s) 204, 351
Bsp143I GATC 6 cut(s) 175, 237, 244, 253, 483, 570
Bsp19I CCATGG 1 cut(s) 631
BspACI CCGC 1 cut(s) 433
BspANI GGCC 4 cut(s) 281, 500, 812, 884
BspCNI CTCAG 3 cut(s) 286, 588, 607
BspHI TCATGA 3 cut(s) 169, 523, 553
BspLI GGNNCC 2 cut(s) 246, 572
BspMAI CTGCAG 1 cut(s) 253
BspPI GGATC 5 cut(s) 239, 245, 252, 565, 578
BspQI GCTCTTC 1 cut(s) 339
BspT104I TTCGAA 1 cut(s) 58
BspTNI GGTCTC 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 757
BsrI ACTGG 3 cut(s) 114, 427, 501
BssECI CCNNGG 3 cut(s) 393, 631, 897
BssMI GATC 6 cut(s) 175, 237, 244, 253, 483, 570
BssSI CACGAG 1 cut(s) 792
BssT1I CCWWGG 2 cut(s) 393, 631
Bst2BI CACGAG 1 cut(s) 792
Bst4CI ACNGT 1 cut(s) 233
Bst6I CTCTTC 2 cut(s) 339, 657
BstBI TTCGAA 1 cut(s) 58
BstC8I GCNNGC 2 cut(s) 150, 437
BstDEI CTNAG 3 cut(s) 294, 575, 594
BstDSI CCRYGG 1 cut(s) 631
BstF5I GGATG 3 cut(s) 80, 702, 787
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 6 cut(s) 178, 240, 247, 256, 486, 573
BstMAI GTCTC 1 cut(s) 683
BstMBI GATC 6 cut(s) 175, 237, 244, 253, 483, 570
BstMWI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
BstNSI RCATGY 1 cut(s) 698
BstSCI CCNGG 1 cut(s) 896
BstSFI CTRYAG 1 cut(s) 249
BstV1I GCAGC 1 cut(s) 137
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 3 cut(s) 237, 244, 570
BstYI RGATCY 3 cut(s) 237, 244, 570
BsuRI GGCC 4 cut(s) 281, 500, 812, 884
BtgI CCRYGG 1 cut(s) 631
BtgZI GCGATG 1 cut(s) 239
BtsCI GGATG 3 cut(s) 80, 702, 787
BtsI GCAGTG 1 cut(s) 689
BtsIMutI CAGTG 2 cut(s) 420, 689
Cac8I GCNNGC 2 cut(s) 150, 437
CciI TCATGA 3 cut(s) 169, 523, 553
CfoI GCGC 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 810
Csp6I GTAC 3 cut(s) 229, 579, 730
CviAII CATG 8 cut(s) 170, 275, 524, 554, 601, 632, 695, 875
CviQI GTAC 3 cut(s) 229, 579, 730
DdeI CTNAG 3 cut(s) 294, 575, 594
DpnI GATC 6 cut(s) 177, 239, 246, 255, 485, 572
DpnII GATC 6 cut(s) 175, 237, 244, 253, 483, 570
EaeI YGGCCR 3 cut(s) 279, 498, 882
Eam1104I CTCTTC 2 cut(s) 339, 657
EarI CTCTTC 2 cut(s) 339, 657
Ecl136II GAGCTC 2 cut(s) 202, 349
Eco130I CCWWGG 2 cut(s) 393, 631
Eco24I GRGCYC 2 cut(s) 204, 351
Eco31I GGTCTC 1 cut(s) 683
Eco32I GATATC 1 cut(s) 430
Eco53kI GAGCTC 2 cut(s) 202, 349
Eco57I CTGAAG 2 cut(s) 69, 363
EcoICRI GAGCTC 2 cut(s) 202, 349
EcoRV GATATC 1 cut(s) 430
EcoT14I CCWWGG 2 cut(s) 393, 631
EcoT38I GRGCYC 2 cut(s) 204, 351
ErhI CCWWGG 2 cut(s) 393, 631
FaeI CATG 8 cut(s) 173, 278, 527, 557, 604, 635, 698, 878
FalI AAGNNNNNCTT 8 cut(s) 336, 368, 352, 384, 377, 409, 716, 748
FaqI GGGAC 3 cut(s) 94, 126, 833
FatI CATG 8 cut(s) 169, 274, 523, 553, 600, 631, 694, 874
Fnu4HI GCNGC 1 cut(s) 126
FokI GGATG 3 cut(s) 87, 689, 794
FriOI GRGCYC 2 cut(s) 204, 351
Fsp4HI GCNGC 1 cut(s) 126
FspBI CTAG 1 cut(s) 582
GlaI GCGC 1 cut(s) 188
GluI GCNGC 1 cut(s) 126
GsaI CCCAGC 1 cut(s) 932
GsuI CTGGAG 1 cut(s) 665
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 4 cut(s) 281, 500, 812, 884
HapII CCGG 1 cut(s) 897
HhaI GCGC 1 cut(s) 189
Hin1II CATG 8 cut(s) 173, 278, 527, 557, 604, 635, 698, 878
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 2 cut(s) 194, 592
HpaII CCGG 1 cut(s) 897
HphI GGTGA 1 cut(s) 437
Hpy166II GTNNAC 2 cut(s) 40, 844
Hpy188I TCNGA 4 cut(s) 199, 295, 508, 707
Hpy8I GTNNAC 2 cut(s) 40, 844
HpyAV CCTTC 5 cut(s) 85, 358, 679, 733, 928
HpyCH4III ACNGT 1 cut(s) 233
HpyCH4IV ACGT 1 cut(s) 861
HpyCH4V TGCA 6 cut(s) 251, 326, 356, 491, 694, 755
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
HpyF3I CTNAG 3 cut(s) 294, 575, 594
HpySE526I ACGT 1 cut(s) 861
Hsp92II CATG 8 cut(s) 173, 278, 527, 557, 604, 635, 698, 878
HspAI GCGC 1 cut(s) 187
Kzo9I GATC 6 cut(s) 175, 237, 244, 253, 483, 570
LguI GCTCTTC 1 cut(s) 339
LmnI GCTCC 2 cut(s) 354, 585
Lsp1109I GCAGC 1 cut(s) 137
LweI GCATC 5 cut(s) 34, 250, 517, 698, 772
MaeI CTAG 1 cut(s) 582
MaeII ACGT 1 cut(s) 861
MaeIII GTNAC 3 cut(s) 299, 454, 802
MalI GATC 6 cut(s) 177, 239, 246, 255, 485, 572
MboI GATC 6 cut(s) 175, 237, 244, 253, 483, 570
MboII GAAGA 8 cut(s) 47, 170, 356, 413, 512, 674, 737, 865
MflI RGATCY 3 cut(s) 237, 244, 570
MhlI GDGCHC 2 cut(s) 204, 351
MlsI TGGCCA 3 cut(s) 281, 500, 884
MluCI AATT 1 cut(s) 502
MluNI TGGCCA 3 cut(s) 281, 500, 884
MlyI GAGTC 2 cut(s) 203, 586
MmeI TCCRAC 3 cut(s) 215, 639, 748
MnlI CCTC 9 cut(s) 391, 584, 658, 722, 756, 772, 810, 832, 926
Mox20I TGGCCA 3 cut(s) 281, 500, 884
MroXI GAANNNNTTC 1 cut(s) 54
MscI TGGCCA 3 cut(s) 281, 500, 884
MseI TTAA 1 cut(s) 612
MslI CAYNNNNRTG 1 cut(s) 794
Msp20I TGGCCA 3 cut(s) 281, 500, 884
MspI CCGG 1 cut(s) 897
MspR9I CCNGG 1 cut(s) 898
MwoI GCNNNNNNNGC 4 cut(s) 145, 269, 278, 497
NciI CCSGG 1 cut(s) 898
NcoI CCATGG 1 cut(s) 631
NdeII GATC 6 cut(s) 175, 237, 244, 253, 483, 570
NlaIII CATG 8 cut(s) 173, 278, 527, 557, 604, 635, 698, 878
NlaIV GGNNCC 2 cut(s) 246, 572
NmeAIII GCCGAG 1 cut(s) 838
NmuCI GTSAC 2 cut(s) 454, 802
NspI RCATGY 1 cut(s) 698
NspV TTCGAA 1 cut(s) 58
OliI CACNNNNGTG 1 cut(s) 794
PagI TCATGA 3 cut(s) 169, 523, 553
PciSI GCTCTTC 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 54
PflMI CCANNNNNTGG 1 cut(s) 880
PkrI GCNGC 1 cut(s) 127
PleI GAGTC 2 cut(s) 202, 586
PpsI GAGTC 2 cut(s) 202, 586
Psp124BI GAGCTC 2 cut(s) 204, 351
Psp1406I AACGTT 1 cut(s) 861
PspFI CCCAGC 1 cut(s) 928
PspN4I GGNNCC 2 cut(s) 246, 572
PspPI GGNCC 1 cut(s) 810
PstI CTGCAG 1 cut(s) 253
PsuI RGATCY 3 cut(s) 237, 244, 570
RsaI GTAC 3 cut(s) 230, 580, 731
RsaNI GTAC 3 cut(s) 229, 579, 730
RseI CAYNNNNRTG 1 cut(s) 794
SacI GAGCTC 2 cut(s) 204, 351
SapI GCTCTTC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 612
SatI GCNGC 1 cut(s) 126
Sau3AI GATC 6 cut(s) 175, 237, 244, 253, 483, 570
Sau96I GGNCC 1 cut(s) 810
ScaI AGTACT 2 cut(s) 580, 731
SchI GAGTC 2 cut(s) 203, 586
ScrFI CCNGG 1 cut(s) 898
SduI GDGCHC 2 cut(s) 204, 351
SetI ASST 9 cut(s) 204, 351, 441, 514, 600, 611, 744, 843, 864
SfaNI GCATC 5 cut(s) 34, 250, 517, 698, 772
SfcI CTRYAG 1 cut(s) 249
SfuI TTCGAA 1 cut(s) 58
SmiMI CAYNNNNRTG 1 cut(s) 794
SmlI CTYRAG 2 cut(s) 182, 191
SmoI CTYRAG 2 cut(s) 182, 191
Sse9I AATT 1 cut(s) 502
SsiI CCGC 1 cut(s) 433
SspMI CTAG 1 cut(s) 582
SstI GAGCTC 2 cut(s) 204, 351
StyD4I CCNGG 1 cut(s) 896
StyI CCWWGG 2 cut(s) 393, 631
TaaI ACNGT 1 cut(s) 233
TaiI ACGT 1 cut(s) 864
TaqI TCGA 4 cut(s) 58, 256, 318, 870
TasI AATT 1 cut(s) 502
TatI WGTACW 2 cut(s) 578, 729
Tru1I TTAA 1 cut(s) 612
Tru9I TTAA 1 cut(s) 612
TscAI CASTG 2 cut(s) 427, 696
TseFI GTSAC 2 cut(s) 454, 802
TseI GCWGC 1 cut(s) 125
Tsp45I GTSAC 2 cut(s) 454, 802
TspDTI ATGAA 2 cut(s) 512, 573
TspRI CASTG 2 cut(s) 427, 696
Van91I CCANNNNNTGG 1 cut(s) 880
XceI RCATGY 1 cut(s) 698
XmnI GAANNNNTTC 1 cut(s) 54
XspI CTAG 1 cut(s) 582
ZrmI AGTACT 2 cut(s) 580, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.