Rmu_sc0025973.1_g000001

Annexin-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025973.1
Physical Location & Seq
Reverse (-)
2 .. 456
455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025973.1_g000001.1.cds

Sequence Viewer

Length: 309 bp
atgttgcagcttttggttgctttggtgactgcttaccgttatgacggtaacgagatcaatgcaaagttggcaaattcagaagctgatattctccatgatgctatcaaagacaaggctttcaatcatgaagaaattatcaggatcctgagtacaaggagcaagacacagctcatggctacattcaacaaatacagagatgatcagggcatttctatcagcaaggaagctgatgatttccagaaggcattgcacacagccattcgatgcctcaatgaccccaagaagtactttgagaaggtaaccaaaact
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.82

Weight (kDa)

7.84

Isoelectric Point (pI)

24.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 136, 149
AcsI RAATTY 1 cut(s) 73
AfaI GTAC 2 cut(s) 151, 287
AgsI TTSAA 2 cut(s) 121, 184
AluBI AGCT 4 cut(s) 10, 83, 169, 227
AluI AGCT 4 cut(s) 10, 83, 169, 227
AlwI GGATC 2 cut(s) 136, 149
AlwNI CAGNNNCTG 1 cut(s) 83
ApeKI GCWGC 1 cut(s) 7
ApoI RAATTY 1 cut(s) 73
AsuHPI GGTGA 1 cut(s) 37
BamHI GGATCC 1 cut(s) 141
BbvI GCAGC 1 cut(s) 19
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BclI TGATCA 1 cut(s) 199
BisI GCNGC 1 cut(s) 8
BlsI GCNGC 1 cut(s) 9
BmcAI AGTACT 1 cut(s) 287
BmiI GGNNCC 1 cut(s) 143
BmsI GCATC 2 cut(s) 88, 254
Bse3DI GCAATG 1 cut(s) 245
BseMI GCAATG 1 cut(s) 245
BseMII CTCAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 19
Bsp143I GATC 3 cut(s) 54, 141, 199
BspCNI CTCAG 1 cut(s) 138
BspHI TCATGA 1 cut(s) 124
BspLI GGNNCC 1 cut(s) 143
BspPI GGATC 2 cut(s) 136, 149
BsrDI GCAATG 1 cut(s) 245
BssMI GATC 3 cut(s) 54, 141, 199
Bst4CI ACNGT 2 cut(s) 38, 47
BstDEI CTNAG 1 cut(s) 146
BstEII GGTNACC 1 cut(s) 298
BstKTI GATC 3 cut(s) 57, 144, 202
BstMBI GATC 3 cut(s) 54, 141, 199
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstPI GGTNACC 1 cut(s) 298
BstV1I GCAGC 1 cut(s) 19
BstX2I RGATCY 1 cut(s) 141
BstYI RGATCY 1 cut(s) 141
CaiI CAGNNNCTG 1 cut(s) 83
CciI TCATGA 1 cut(s) 124
Csp6I GTAC 2 cut(s) 150, 286
CviAII CATG 3 cut(s) 95, 125, 172
CviJI RGCY 7 cut(s) 10, 83, 116, 169, 176, 227, 257
CviKI_1 RGCY 7 cut(s) 10, 83, 116, 169, 176, 227, 257
CviQI GTAC 2 cut(s) 150, 286
DdeI CTNAG 1 cut(s) 146
DpnI GATC 3 cut(s) 56, 143, 201
DpnII GATC 3 cut(s) 54, 141, 199
Eco91I GGTNACC 1 cut(s) 298
EcoO65I GGTNACC 1 cut(s) 298
FaeI CATG 3 cut(s) 98, 128, 175
FaiI YATR 4 cut(s) 42, 96, 126, 173
FalI AAGNNNNNCTT 2 cut(s) 272, 304
FatI CATG 3 cut(s) 94, 124, 171
FbaI TGATCA 1 cut(s) 199
Fnu4HI GCNGC 1 cut(s) 8
Fsp4HI GCNGC 1 cut(s) 8
GluI GCNGC 1 cut(s) 8
Hin1II CATG 3 cut(s) 98, 128, 175
HphI GGTGA 1 cut(s) 37
Hpy188I TCNGA 1 cut(s) 79
Hpy188III TCNNGA 4 cut(s) 125, 139, 145, 238
HpyAV CCTTC 2 cut(s) 235, 289
HpyCH4III ACNGT 2 cut(s) 38, 47
HpyCH4V TGCA 3 cut(s) 7, 62, 250
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 146
Hsp92II CATG 3 cut(s) 98, 128, 175
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 3 cut(s) 54, 141, 199
LmnI GCTCC 1 cut(s) 156
LpnPI CCDG 4 cut(s) 124, 158, 188, 251
Lsp1109I GCAGC 1 cut(s) 19
LweI GCATC 2 cut(s) 88, 254
MaeIII GTNAC 3 cut(s) 25, 47, 298
MalI GATC 3 cut(s) 56, 143, 201
MboI GATC 3 cut(s) 54, 141, 199
MboII GAAGA 1 cut(s) 140
MflI RGATCY 1 cut(s) 141
MluCI AATT 2 cut(s) 73, 132
MnlI CCTC 1 cut(s) 278
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeII GATC 3 cut(s) 54, 141, 199
NlaIII CATG 3 cut(s) 98, 128, 175
NlaIV GGNNCC 1 cut(s) 143
NmuCI GTSAC 1 cut(s) 25
PagI TCATGA 1 cut(s) 124
PkrI GCNGC 1 cut(s) 9
PspEI GGTNACC 1 cut(s) 298
PspN4I GGNNCC 1 cut(s) 143
PstNI CAGNNNCTG 1 cut(s) 83
PsuI RGATCY 1 cut(s) 141
RsaI GTAC 2 cut(s) 151, 287
RsaNI GTAC 2 cut(s) 150, 286
SatI GCNGC 1 cut(s) 8
Sau3AI GATC 3 cut(s) 54, 141, 199
ScaI AGTACT 1 cut(s) 287
SetI ASST 5 cut(s) 12, 85, 171, 229, 300
SfaNI GCATC 2 cut(s) 88, 254
Sse9I AATT 2 cut(s) 73, 132
TaaI ACNGT 2 cut(s) 38, 47
TaqI TCGA 1 cut(s) 262
TasI AATT 2 cut(s) 73, 132
TatI WGTACW 2 cut(s) 149, 285
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 7
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 141
XapI RAATTY 1 cut(s) 73
ZrmI AGTACT 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.