Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001204

Physical Location & Seq

Genomic Coordinates Reverse (-)

6856474 .. 6864843

Gene Structure 8370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1051700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3225 bp

ATGGCGGAACGCGGATCGGACGCTCAGGGTCGTCGATTAGACTTTCGGCAATTACTGGTTGAGGCCCAGCACCGATGGCTGCGCCCTGCCGAAATCTGTGAAATTCTTAGCAATTTTCACAAGTTCCATATTTCACCAGAGCCTCCGAACAAACCACGTAGCGGTTCGCTTTATCTTTTTGACAGGAAGGTTCTGAGATACTTTAGAAAGGATGGACATAACTGGAGGAAGAAACGAGACGGCAAGACTGTGAAGGAGGCCCATGAGAAGCTAAAGGTTGGCAGTGTAGATGTTCTACACTGCTACTATGCCCATGGAGAAGATGATGAAAATTTTCAAAGGCGCTGCTATTGGCTGCTCGAGCAGGATTTGATGCACATAGTTTTTGTTCATTACTTGCAAGTAAAGGGTAATAGGGCAAATGTAGGAGGCATTATAGAGAATGATGAGGTTACACCGGATCTGAAAAGGGGCAGCCCCTGGACTTCTAGCCCTTCTAATAGTAATGGCAGAACACCTTCAGGATATACAGATCATGCAAGCCCAAGCAGCACTTCGACATCAGCATGTGAAGATGTTGATTCCGGAGATAGTCGCCAAGCGAGTTCCTTATTTCACTCAGTTTTTGAGTCACCAAAAATGGGGAATGGTCCTCTCATGGACAACGCAGAGATTGATCCCTCACTGCATCCAAGTTCAAACAATCATGATGGCCAGTCATCAATTCATGGAGTCTACAGGCCACAATTTGAGAATGATCAACATTGTTTCAGTGCTGACTCTACTGGTGTGATTGATTGTCAAAAAACACTTGGCGCGGTATCCTGGGAAGAAATTTTGGAACAATGCACCACAGGATTCCACACCGGAACTTCTCATGCATCAATGTCTACCACCCAAATTGGTTCTGGTGAAGTTCCTGTTGAACAACAAATTTTAGGGAATAGTTTTTTAAAGGAGGAGTTTGGGAGTTCTATGCCATTTCAAACAAATTGGCAGCTTCCTTTGGGAGACAATTCACTGCAGTTGCCTGAGTGTTCCCTGGACCAGTCAACGAATTTGCAAAGAACTCTTGATGCGAATCTGAGAAATACTCCTGACCTTGTTAGTGCTCATCTCAATCAGCGAAATGAGCAGCTTGTGCAGGACGACCTTCAAGCACAGCTTACAAATGCAGAATCTGAATGTTTAATCATATCAAGTTCTGAGCATGATGTTCCTAAAGATGGGAATGTCAACTATGCTTTCACTTTGAGACAGCAATTATTAGATCGAGAAGACGGTTTGAAGAAAGTTGACAGCTTTTCTAGGTGGGTTTCCAAGGAACTCGAAGAGGTAGATGATCTGCAGATGCAATCTTCATCTGGTATTCCATGGAGCACGGCTGAATATGGAGATGTAGTTGATGATTCCTCGTTGAGCCCCTCCGTCTCCCAGGACCAGCTTTTCAGCATAGTTGATTTTTCACCAAAGTGGGCGTATACAGACTCTGAAATTGAGGTTCTGGTTTTCGGAACATTCTTGGTAAGTCAAAAGGAGGTAACAAAATACAGCTGGTCTTGTATGTTCGGGGAGGTGGAGGTTCCAGCACAGGTTTTAGCCAGTGGAGTTCTTTTCTGTTTTGCTCCACCTCACAGTGCCGGGCAAGTCCCTTTCTATGTAACCTGTTCCAACAGGTTAGCTTGTAGTGAAGTAAGGGAGTTCAATTATCAAGTGGGCTCCACTAAAGGTTTTGATATGACAGATATAGGCGATGGTGCTGCACATGAAATGCATCTTCACTTACGTCTTGAGAGTTTACTGTCTCTGAGACCTTTAAGCCCTTCAGGTCAACCATTTGGAGGTGTTAAGGAGAATCGAAACCTAATTAGTAAAATCATATCACTCCAGGAGGAAGAGGATTATTTAGCAGAGCCAACAGTAGTGAATTATTTGCTCCAAAATGAAGGGATGGAACATCTTATAAAGCTGATGAAAGAGAAGTTGTACACATGGCTCCTTTATAAAGCAATAGAAGATGGTAAAGGACCAAGTGTATTAGATGCTGAGGGACAAGGTGTCCTACATTTAGCAGCTGCCCTTGGCTACGATTGGGCCATAAAACCCACTGTAACTGCGGGAGTTAGCATCAATTTTCGTGATGTTAATGGATGGACTGCCCTTCATTGGGCTGCATTCTGTGGCAGAGAGCATACAGTTGCAGTCCTTGTATCTCTTGGTGCAGATCCGGGAGCACTGACTGATCCGTCTCCAGAGGTTCCTTTGGGTAGAACACCGGCGGATCTGGCATCTGTTAGCAGTCACAAAGGAATCTCAGGCTTCCTTGCTGAGTCTTCCCTGACCACTTACCTTAAATCCCTTACAATGAACGATGCAAAGGAAGATGGTGCTGCAGAAATATCTGGAACAAAAGTTGTCAAAACTTTTTCAGAGCGGATAGCTACACCTGTGAGTTACGGTGATATGCCCGATGCACTGTCACTGAAGGACTCACTTACTGCTATAACTAATGCTACCCAAGCTGCTGATCGGATACAGCAAATGCTCAGGATGCAGTCATTTGAGAGGAGACGGTTAACTGAGTATGACAGTGATGAGTTCGGAATGCCGGATGAGCGAGCAATTTCATTCATAACTTCCAAATCACACAAGGGACCGATCAACAGAAATGCTCATACTGCTGCAGTTCAGATACAGAAAAAGTTTCGTGGTTGGAAAAAGAGAAAAGAATTCTTGATAATTCGTCAGAGAATTGTTAAAATCCAGGCCCATGTAAGGGGACACCAGGTAAGGAAACAATACAAGGCAATCACCTGGTCAGTTGGAATTCTGGAGAAAGTTATTTTGCGTTGGAGACGTAAGGGGACTGGTTTACGAGGATTCCGACCAGATGCAGTTGCCAAGATTCCGGACCCCCAAACTGTGGCCTCAAGTGAGGATGATTATGATTTTCTCAAGAAAGGAAGAAAACAAACAGAGGAAAGATTACAAAAAGCACTTACCAGGGTAAAGTCTATGGTTCAATATCCAGAAGGAAGAGCTCAATACCGTAGACTGCTAAATGTTGTTGAAGGATTCGGTGAAACAAAGGTAAATGACATGGCTGTCGAGGTATCAGAAGAAAAGGCTGAGGGTGGTGATGAAAAGGCCGAGGGTGGCGATGATCTAATTGATATCGACAAGTTGTTGGATGATGACACTTTCATGTCTATAGCATTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071275 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 CG-1 IQ TIG

Protein Analysis

1075

Amino Acids

119.89

Weight (kDa)

5.47

Isoelectric Point (pI)

47.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	21 - 134	1.3e-50	CG-1 domain
Ank_2	PF12796	671 - 744	1.6e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	688 - 777	1.5e-07	Ankyrin repeats (3 copies)
Ank	PF00023	716 - 747	7.3e-06	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09410 AT5G09410 AT5G09410 AT5G09410 AT5G64220 AT5G64220
fragaria_vesca	FvH4_5g27670 FvH4_5g27670 FvH4_5g27670 FvH4_5g27670
malus_domestica	MD05G1044600.v1.1 MD10G1051700.v1.1 MD12G1040100.v1.1 MD13G1144300.v1.1 MD16G1084000.v1.1 MD16G1139000.v1.1 MD16G1139200.v1.1
prunus_persica	Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.8G060300_v2.0.a1
pyrus_communis	pycom01g00940 pycom05g03720 pycom10g03650 pycom12g03420 pycom13g12490 pycom16g12350 pycom16g12360
rosa_chinensis	RchiOBHm_Chr2g0113081 RchiOBHm_Chr7g0219321
rosa_laevigata	RLG00000002297 RLG00000022767
rosa_multiflora	Rmu_sc0029995.1_g000002
rosa_roxburghii	Rroxscaffold_2G00129370 Rroxscaffold_3G00240090
rosa_rugosa	Rorug01G0154600.1 Rorug07G0184300
rosa_samantha	Rh2AG238800 Rh2AG238900 Rh2AG324900 Rh2BG252600 Rh2CG242800 Rh2CG242900 Rh2DG246800 Rh4BG352900 Rh5AG518400 Rh7AG327200 Rh7BG317200 Rh7CG344500 Rh7DG209600 Rh7DG322800
rosa_wichuraiana	Rw0G004510 Rw2G018730 Rw7G027570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1964, 2004
AasI	GACNNNNNNGTC	2 cut(s)	2245, 3104
AccB7I	CCANNNNNTGG	1 cut(s)	2923
AccBSI	CCGCTC	1 cut(s)	2434
AccI	GTMKAC	4 cut(s)	735, 890, 1481, 3052
AccII	CGCG	2 cut(s)	12, 818
AccIII	TCCGGA	2 cut(s)	584, 2908
AciI	CCGC	7 cut(s)	5, 12, 162, 818, 2117, 2279, 2434
AclWI	GGATC	6 cut(s)	22, 468, 671, 2219, 2237, 2289
AcoI	YGGCCR	1 cut(s)	712
AcsI	RAATTY	7 cut(s)	102, 331, 834, 933, 1057, 2729, 2826
AcuI	CTGAAG	3 cut(s)	504, 1809, 2504
AfaI	GTAC	1 cut(s)	1988
AfiI	CCNNNNNNNGG	9 cut(s)	161, 641, 1226, 1841, 2166, 2167, 2775, 2776, 2923
AgsI	TTSAA	9 cut(s)	338, 699, 926, 986, 1157, 1288, 1705, 3023, 3071
AhdI	GACNNNNNGTC	1 cut(s)	2057
AjnI	CCWGG	9 cut(s)	479, 824, 1041, 1434, 1887, 2763, 2784, 2813, 3002
AjuI	GAANNNNNNNTTGG	2 cut(s)	538, 570
AleI	CACNNNNGTG	1 cut(s)	1471
Alw21I	GWGCWC	4 cut(s)	1114, 1382, 2236, 3043
Alw26I	GTCTC	9 cut(s)	231, 1005, 1249, 1435, 1804, 1809, 2253, 2563, 2848
AlwI	GGATC	6 cut(s)	22, 468, 671, 2219, 2237, 2289
AlwNI	CAGNNNCTG	3 cut(s)	480, 1181, 1490
Ama87I	CYCGRG	1 cut(s)	359
Aor13HI	TCCGGA	2 cut(s)	584, 2908
AoxI	GGCC	8 cut(s)	63, 258, 712, 740, 2094, 2766, 2925, 3147
ApoI	RAATTY	7 cut(s)	102, 331, 834, 933, 1057, 2729, 2826
Asp700I	GAANNNNTTC	2 cut(s)	333, 517
AspLEI	GCGC	3 cut(s)	84, 345, 818
AsuC2I	CCSGG	2 cut(s)	1642, 2229
AsuHPI	GGTGA	8 cut(s)	126, 624, 923, 1458, 2471, 2803, 3092, 3149
AvaI	CYCGRG	1 cut(s)	359
AvaII	GGWCC	6 cut(s)	650, 1045, 1438, 2027, 2654, 2911
BalI	TGGCCA	1 cut(s)	714
BanII	GRGCYC	3 cut(s)	1424, 1721, 3043
BbsI	GAAGAC	2 cut(s)	1284, 2325
Bbv12I	GWGCWC	4 cut(s)	1114, 1382, 2236, 3043
BbvCI	CCTCAGC	2 cut(s)	2046, 3129
BccI	CCATC	9 cut(s)	69, 206, 704, 1220, 1748, 1945, 2012, 2145, 2378
BceAI	ACGGC	2 cut(s)	256, 1398
BcgI	CGANNNNNNTGC	2 cut(s)	1742, 1776
BciT130I	CCWGG	9 cut(s)	481, 826, 1043, 1436, 1889, 2765, 2786, 2815, 3004
BciVI	GTATCC	2 cut(s)	832, 2526
BclI	TGATCA	1 cut(s)	757
BcnI	CCSGG	2 cut(s)	1642, 2229
BcoDI	GTCTC	9 cut(s)	231, 1005, 1249, 1435, 1804, 1809, 2253, 2563, 2848
BfaI	CTAG	2 cut(s)	489, 1308
BfmI	CTRYAG	6 cut(s)	736, 1022, 1346, 2391, 2682, 3210
BfoI	RGCGCY	1 cut(s)	346
BfuI	GTATCC	2 cut(s)	832, 2526
Bme18I	GGWCC	6 cut(s)	650, 1045, 1438, 2027, 2654, 2911
BmeRI	GACNNNNNGTC	1 cut(s)	2057
BmeT110I	CYCGRG	1 cut(s)	359
BmiI	GGNNCC	6 cut(s)	1584, 1720, 1997, 2259, 2655, 2913
BpiI	GAAGAC	2 cut(s)	1284, 2325
BplI	GAGNNNNNCTC	2 cut(s)	1078, 1110
BpmI	CTGGAG	4 cut(s)	244, 1871, 2235, 2852
Bpu10I	CCTNAGC	4 cut(s)	24, 2046, 2546, 3129
BpuEI	CTTGAG	3 cut(s)	1811, 2914, 2939
BpuMI	CCSGG	2 cut(s)	1642, 2229
BsaAI	YACGTR	1 cut(s)	158
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaI	GGTCTC	1 cut(s)	1804
BsaWI	WCCGGW	4 cut(s)	457, 584, 866, 2908
BsaXI	ACNNNNNCTCC	2 cut(s)	1386, 1416
Bsc4I	CCNNNNNNNGG	9 cut(s)	161, 641, 1226, 1841, 2166, 2167, 2775, 2776, 2923
Bse118I	RCCGGY	1 cut(s)	2275
Bse1I	ACTGG	7 cut(s)	60, 227, 715, 790, 1048, 1602, 2872
Bse8I	GATNNNNATC	1 cut(s)	1080
BseAI	TCCGGA	2 cut(s)	584, 2908
BseBI	CCWGG	9 cut(s)	481, 826, 1043, 1436, 1889, 2765, 2786, 2815, 3004
BseGI	GGATG	8 cut(s)	217, 688, 1956, 2156, 2556, 2617, 2944, 3196
BseJI	GATNNNNATC	1 cut(s)	1080
BseLI	CCNNNNNNNGG	9 cut(s)	161, 641, 1226, 1841, 2166, 2167, 2775, 2776, 2923
BseNI	ACTGG	7 cut(s)	60, 227, 715, 790, 1048, 1602, 2872
BseRI	GAGGAG	2 cut(s)	974, 2581
BseYI	CCCAGC	1 cut(s)	66
BsgI	GTGCAG	3 cut(s)	1163, 1746, 2241
Bsh1236I	CGCG	2 cut(s)	12, 818
BshFI	GGCC	8 cut(s)	65, 260, 714, 742, 2096, 2768, 2927, 3149
BsiHKAI	GWGCWC	4 cut(s)	1114, 1382, 2236, 3043
BsiHKCI	CYCGRG	1 cut(s)	359
BsiSI	CCGG	8 cut(s)	458, 585, 867, 1641, 2228, 2276, 2609, 2909
BslFI	GGGAC	5 cut(s)	1634, 2064, 2667, 2793, 2878
BslI	CCNNNNNNNGG	9 cut(s)	161, 641, 1226, 1841, 2166, 2167, 2775, 2776, 2923
BsmAI	GTCTC	9 cut(s)	231, 1005, 1249, 1435, 1804, 1809, 2253, 2563, 2848
BsmBI	CGTCTC	5 cut(s)	231, 1435, 2253, 2563, 2848
BsmFI	GGGAC	5 cut(s)	1634, 2064, 2667, 2793, 2878
BsmI	GAATGC	2 cut(s)	2174, 2610
BsnI	GGCC	8 cut(s)	65, 260, 714, 742, 2096, 2768, 2927, 3149
Bso31I	GGTCTC	1 cut(s)	1804
BsoBI	CYCGRG	1 cut(s)	359
Bsp1286I	GDGCHC	6 cut(s)	1114, 1382, 1424, 1721, 2236, 3043
Bsp13I	TCCGGA	2 cut(s)	584, 2908
Bsp1407I	TGTACA	1 cut(s)	1986
Bsp19I	CCATGG	2 cut(s)	313, 1373
BspACI	CCGC	7 cut(s)	5, 12, 162, 818, 2117, 2279, 2434
BspANI	GGCC	8 cut(s)	65, 260, 714, 742, 2096, 2768, 2927, 3149
BspEI	TCCGGA	2 cut(s)	584, 2908
BspFNI	CGCG	2 cut(s)	12, 818
BspHI	TCATGA	1 cut(s)	706
BspLI	GGNNCC	6 cut(s)	1584, 1720, 1997, 2259, 2655, 2913
BspMAI	CTGCAG	4 cut(s)	1026, 1350, 2395, 2686
BspPI	GGATC	6 cut(s)	22, 468, 671, 2219, 2237, 2289
BspQI	GCTCTTC	1 cut(s)	3031
BspTNI	GGTCTC	1 cut(s)	1804
BsrBI	CCGCTC	1 cut(s)	2434
BsrFI	RCCGGY	1 cut(s)	2275
BsrGI	TGTACA	1 cut(s)	1986
BsrI	ACTGG	7 cut(s)	60, 227, 715, 790, 1048, 1602, 2872
BssAI	RCCGGY	1 cut(s)	2275
BssNAI	GTATAC	1 cut(s)	1482
BssT1I	CCWWGG	4 cut(s)	313, 1320, 1373, 2080
Bst1107I	GTATAC	1 cut(s)	1482
Bst2UI	CCWGG	9 cut(s)	481, 826, 1043, 1436, 1889, 2765, 2786, 2815, 3004
Bst6I	CTCTTC	3 cut(s)	1326, 1890, 3031
BstAPI	GCANNNNNTGC	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	1986
BstBAI	YACGTR	1 cut(s)	158
BstC8I	GCNNGC	2 cut(s)	541, 2619
BstDSI	CCRYGG	2 cut(s)	313, 1373
BstF5I	GGATG	8 cut(s)	217, 688, 1956, 2156, 2556, 2617, 2944, 3196
BstFNI	CGCG	2 cut(s)	12, 818
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	3 cut(s)	84, 345, 818
BstMAI	GTCTC	9 cut(s)	231, 1005, 1249, 1435, 1804, 1809, 2253, 2563, 2848
BstNI	CCWGG	9 cut(s)	481, 826, 1043, 1436, 1889, 2765, 2786, 2815, 3004
BstNSI	RCATGY	1 cut(s)	570
BstSFI	CTRYAG	6 cut(s)	736, 1022, 1346, 2391, 2682, 3210
BstUI	CGCG	2 cut(s)	12, 818
BstV2I	GAAGAC	2 cut(s)	1284, 2325
BstX2I	RGATCY	3 cut(s)	460, 2224, 2281
BstYI	RGATCY	3 cut(s)	460, 2224, 2281
BstZ17I	GTATAC	1 cut(s)	1482
BsuI	GTATCC	2 cut(s)	832, 2526
BsuRI	GGCC	8 cut(s)	65, 260, 714, 742, 2096, 2768, 2927, 3149
BtgI	CCRYGG	2 cut(s)	313, 1373
BtgZI	GCGATG	2 cut(s)	1767, 3174
BtsCI	GGATG	8 cut(s)	217, 688, 1956, 2156, 2556, 2617, 2944, 3196
BtsI	GCAGTG	4 cut(s)	289, 298, 683, 1019
Cac8I	GCNNGC	2 cut(s)	541, 2619
CaiI	CAGNNNCTG	3 cut(s)	480, 1181, 1490
CciI	TCATGA	1 cut(s)	706
CfoI	GCGC	3 cut(s)	84, 345, 818
Cfr10I	RCCGGY	1 cut(s)	2275
CseI	GACGC	1 cut(s)	29
CsiI	ACCWGGT	2 cut(s)	2784, 2813
Csp6I	GTAC	1 cut(s)	1987
CspCI	CAANNNNNGTGG	2 cut(s)	883, 918
CviQI	GTAC	1 cut(s)	1987
DraI	TTTAAA	1 cut(s)	954
DrdI	GACNNNNNNGTC	2 cut(s)	2245, 3104
DriI	GACNNNNNGTC	1 cut(s)	2057
DseDI	GACNNNNNNGTC	2 cut(s)	2245, 3104
EaeI	YGGCCR	1 cut(s)	712
Eam1104I	CTCTTC	3 cut(s)	1326, 1890, 3031
Eam1105I	GACNNNNNGTC	1 cut(s)	2057
EarI	CTCTTC	3 cut(s)	1326, 1890, 3031
EciI	GGCGGA	2 cut(s)	20, 2294
Ecl136II	GAGCTC	1 cut(s)	3041
Eco130I	CCWWGG	4 cut(s)	313, 1320, 1373, 2080
Eco24I	GRGCYC	3 cut(s)	1424, 1721, 3043
Eco31I	GGTCTC	1 cut(s)	1804
Eco32I	GATATC	1 cut(s)	3175
Eco47I	GGWCC	6 cut(s)	650, 1045, 1438, 2027, 2654, 2911
Eco53kI	GAGCTC	1 cut(s)	3041
Eco57I	CTGAAG	3 cut(s)	504, 1809, 2504
Eco88I	CYCGRG	1 cut(s)	359
EcoICRI	GAGCTC	1 cut(s)	3041
EcoRI	GAATTC	2 cut(s)	2729, 2826
EcoRII	CCWGG	9 cut(s)	479, 824, 1041, 1434, 1887, 2763, 2784, 2813, 3002
EcoRV	GATATC	1 cut(s)	3175
EcoT14I	CCWWGG	4 cut(s)	313, 1320, 1373, 2080
EcoT22I	ATGCAT	2 cut(s)	883, 1776
EcoT38I	GRGCYC	3 cut(s)	1424, 1721, 3043
ErhI	CCWWGG	4 cut(s)	313, 1320, 1373, 2080
Esp3I	CGTCTC	5 cut(s)	231, 1435, 2253, 2563, 2848
FalI	AAGNNNNNCTT	4 cut(s)	538, 570, 1149, 1181
FaqI	GGGAC	5 cut(s)	1634, 2064, 2667, 2793, 2878
FauI	CCCGC	1 cut(s)	2110
FbaI	TGATCA	1 cut(s)	757
FblI	GTMKAC	4 cut(s)	735, 890, 1481, 3052
FokI	GGATG	8 cut(s)	224, 675, 1963, 2163, 2563, 2624, 2951, 3203
FriOI	GRGCYC	3 cut(s)	1424, 1721, 3043
FspBI	CTAG	2 cut(s)	489, 1308
GlaI	GCGC	3 cut(s)	83, 344, 817
GsaI	CCCAGC	1 cut(s)	70
GsuI	CTGGAG	4 cut(s)	244, 1871, 2235, 2852
HaeII	RGCGCY	1 cut(s)	346
HaeIII	GGCC	8 cut(s)	65, 260, 714, 742, 2096, 2768, 2927, 3149
HapII	CCGG	8 cut(s)	458, 585, 867, 1641, 2228, 2276, 2609, 2909
HgaI	GACGC	1 cut(s)	29
HhaI	GCGC	3 cut(s)	84, 345, 818
Hin6I	GCGC	3 cut(s)	82, 343, 816
HinP1I	GCGC	3 cut(s)	82, 343, 816
HincII	GTYRAC	5 cut(s)	1053, 1237, 1297, 1832, 2577
HindII	GTYRAC	5 cut(s)	1053, 1237, 1297, 1832, 2577
HpaI	GTTAAC	1 cut(s)	2577
HpaII	CCGG	8 cut(s)	458, 585, 867, 1641, 2228, 2276, 2609, 2909
HphI	GGTGA	8 cut(s)	126, 624, 923, 1458, 2471, 2803, 3092, 3149
Hpy99I	CGWCG	1 cut(s)	36
HpyCH4IV	ACGT	3 cut(s)	157, 1786, 2857
HpySE526I	ACGT	3 cut(s)	157, 1786, 2857
HspAI	GCGC	3 cut(s)	82, 343, 816
Kpn2I	TCCGGA	2 cut(s)	584, 2908
Ksp22I	TGATCA	1 cut(s)	757
KspAI	GTTAAC	1 cut(s)	2577
LguI	GCTCTTC	1 cut(s)	3031
LmnI	GCTCC	6 cut(s)	1377, 1630, 1724, 1941, 2001, 2231
MabI	ACCWGGT	2 cut(s)	2784, 2813
MaeI	CTAG	2 cut(s)	489, 1308
MaeII	ACGT	3 cut(s)	157, 1786, 2857
MaeIII	GTNAC	8 cut(s)	451, 630, 1540, 1660, 2110, 2300, 2453, 2478
MbiI	CCGCTC	1 cut(s)	2434
MflI	RGATCY	3 cut(s)	460, 2224, 2281
MhlI	GDGCHC	6 cut(s)	1114, 1382, 1424, 1721, 2236, 3043
MlsI	TGGCCA	1 cut(s)	714
MluNI	TGGCCA	1 cut(s)	714
MlyI	GAGTC	6 cut(s)	638, 741, 773, 1481, 2339, 2483
MmeI	TCCRAC	6 cut(s)	1695, 2693, 2803, 2831, 2908, 3168
Mox20I	TGGCCA	1 cut(s)	714
Mph1103I	ATGCAT	2 cut(s)	883, 1776
MroI	TCCGGA	2 cut(s)	584, 2908
MroXI	GAANNNNTTC	2 cut(s)	333, 517
MscI	TGGCCA	1 cut(s)	714
MseI	TTAA	8 cut(s)	953, 1190, 1817, 1848, 2145, 2352, 2576, 2757
MslI	CAYNNNNRTG	3 cut(s)	565, 1471, 3203
Msp20I	TGGCCA	1 cut(s)	714
MspA1I	CMGCKG	2 cut(s)	1554, 2075
MspI	CCGG	8 cut(s)	458, 585, 867, 1641, 2228, 2276, 2609, 2909
Mva1269I	GAATGC	2 cut(s)	2174, 2610
MvaI	CCWGG	9 cut(s)	481, 826, 1043, 1436, 1889, 2765, 2786, 2815, 3004
MvnI	CGCG	2 cut(s)	12, 818
NciI	CCSGG	2 cut(s)	1642, 2229
NcoI	CCATGG	2 cut(s)	313, 1373
NlaIV	GGNNCC	6 cut(s)	1584, 1720, 1997, 2259, 2655, 2913
NmeAIII	GCCGAG	1 cut(s)	3175
NmuCI	GTSAC	3 cut(s)	630, 2300, 2478
NsiI	ATGCAT	2 cut(s)	883, 1776
NspI	RCATGY	1 cut(s)	570
OliI	CACNNNNGTG	1 cut(s)	1471
PaeR7I	CTCGAG	1 cut(s)	359
PagI	TCATGA	1 cut(s)	706
PciSI	GCTCTTC	1 cut(s)	3031
PcsI	WCGNNNNNNNCGW	1 cut(s)	2881
PctI	GAATGC	2 cut(s)	2174, 2610
PdmI	GAANNNNTTC	2 cut(s)	333, 517
PflMI	CCANNNNNTGG	1 cut(s)	2923
PfoI	TCCNGGA	2 cut(s)	1887, 2227
PleI	GAGTC	6 cut(s)	637, 740, 773, 1481, 2338, 2483
PpsI	GAGTC	6 cut(s)	637, 740, 773, 1481, 2338, 2483
Ppu21I	YACGTR	1 cut(s)	158
PsiI	TTATAA	2 cut(s)	1964, 2004
Psp124BI	GAGCTC	1 cut(s)	3043
Psp6I	CCWGG	9 cut(s)	479, 824, 1041, 1434, 1887, 2763, 2784, 2813, 3002
PspFI	CCCAGC	1 cut(s)	66
PspGI	CCWGG	9 cut(s)	479, 824, 1041, 1434, 1887, 2763, 2784, 2813, 3002
PspN4I	GGNNCC	6 cut(s)	1584, 1720, 1997, 2259, 2655, 2913
PspXI	VCTCGAGB	1 cut(s)	359
PstI	CTGCAG	4 cut(s)	1026, 1350, 2395, 2686
PstNI	CAGNNNCTG	3 cut(s)	480, 1181, 1490
PsuI	RGATCY	3 cut(s)	460, 2224, 2281
PvuII	CAGCTG	2 cut(s)	1554, 2075
RsaI	GTAC	1 cut(s)	1988
RsaNI	GTAC	1 cut(s)	1987
RseI	CAYNNNNRTG	3 cut(s)	565, 1471, 3203
SacI	GAGCTC	1 cut(s)	3043
SapI	GCTCTTC	1 cut(s)	3031
SaqAI	TTAA	8 cut(s)	953, 1190, 1817, 1848, 2145, 2352, 2576, 2757
SchI	GAGTC	6 cut(s)	638, 741, 773, 1481, 2339, 2483
SduI	GDGCHC	6 cut(s)	1114, 1382, 1424, 1721, 2236, 3043
SexAI	ACCWGGT	2 cut(s)	2784, 2813
SfcI	CTRYAG	6 cut(s)	736, 1022, 1346, 2391, 2682, 3210
Sfr274I	CTCGAG	1 cut(s)	359
SgrAI	CRCCGGYG	1 cut(s)	2275
SinI	GGWCC	6 cut(s)	650, 1045, 1438, 2027, 2654, 2911
SlaI	CTCGAG	1 cut(s)	359
SmiMI	CAYNNNNRTG	3 cut(s)	565, 1471, 3203
SmlI	CTYRAG	4 cut(s)	359, 1790, 2929, 2954
SmoI	CTYRAG	4 cut(s)	359, 1790, 2929, 2954
SsiI	CCGC	7 cut(s)	5, 12, 162, 818, 2117, 2279, 2434
SspMI	CTAG	2 cut(s)	489, 1308
SstI	GAGCTC	1 cut(s)	3043
StyI	CCWWGG	4 cut(s)	313, 1320, 1373, 2080
TaiI	ACGT	3 cut(s)	160, 1789, 2860
TaqI	TCGA	8 cut(s)	34, 360, 557, 1273, 1329, 1858, 3108, 3177
TaqII	GACCGA	1 cut(s)	2671
TatI	WGTACW	1 cut(s)	1986
Tru1I	TTAA	8 cut(s)	953, 1190, 1817, 1848, 2145, 2352, 2576, 2757
Tru9I	TTAA	8 cut(s)	953, 1190, 1817, 1848, 2145, 2352, 2576, 2757
TseFI	GTSAC	3 cut(s)	630, 2300, 2478
Tsp45I	GTSAC	3 cut(s)	630, 2300, 2478
TspGWI	ACGGA	2 cut(s)	1417, 2235
Van91I	CCANNNNNTGG	1 cut(s)	2923
VpaK11BI	GGWCC	6 cut(s)	650, 1045, 1438, 2027, 2654, 2911
XapI	RAATTY	7 cut(s)	102, 331, 834, 933, 1057, 2729, 2826
XceI	RCATGY	1 cut(s)	570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	905
XhoI	CTCGAG	1 cut(s)	359
XmiI	GTMKAC	4 cut(s)	735, 890, 1481, 3052
XmnI	GAANNNNTTC	2 cut(s)	333, 517
XspI	CTAG	2 cut(s)	489, 1308
Zsp2I	ATGCAT	2 cut(s)	883, 1776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.