calmodulin-binding transcription activator
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1970, 2010 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2251 |
| Acc65I | GGTACC | 1 cut(s) | 2263 |
| AccB1I | GGYRCC | 1 cut(s) | 2263 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 161, 1103 |
| AccI | GTMKAC | 3 cut(s) | 735, 2539, 3061 |
| AccIII | TCCGGA | 1 cut(s) | 584 |
| AciI | CCGC | 3 cut(s) | 5, 818, 2123 |
| AclWI | GGATC | 9 cut(s) | 22, 468, 829, 1053, 1385, 2225, 2243, 3130, 3159 |
| AcoI | YGGCCR | 1 cut(s) | 712 |
| AcsI | RAATTY | 6 cut(s) | 102, 746, 1057, 2316, 2738, 2835 |
| AcuI | CTGAAG | 5 cut(s) | 504, 1809, 1907, 2073, 2510 |
| AdeI | CACNNNGTG | 3 cut(s) | 161, 815, 2659 |
| AfaI | GTAC | 4 cut(s) | 20, 1481, 1994, 2265 |
| AflII | CTTAAG | 1 cut(s) | 2963 |
| AgeI | ACCGGT | 1 cut(s) | 2665 |
| AgsI | TTSAA | 7 cut(s) | 62, 338, 693, 699, 926, 1157, 1288 |
| AhlI | ACTAGT | 1 cut(s) | 785 |
| AleI | CACNNNNGTG | 1 cut(s) | 1471 |
| Alw21I | GWGCWC | 3 cut(s) | 517, 2242, 3052 |
| Alw26I | GTCTC | 8 cut(s) | 231, 1005, 1249, 1809, 2221, 2259, 2569, 2857 |
| AlwI | GGATC | 9 cut(s) | 22, 468, 829, 1053, 1385, 2225, 2243, 3130, 3159 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 480, 1490, 2234 |
| Aor13HI | TCCGGA | 1 cut(s) | 584 |
| AoxI | GGCC | 8 cut(s) | 28, 258, 712, 740, 1099, 2100, 2775, 3135 |
| ApaI | GGGCCC | 1 cut(s) | 32 |
| ApoI | RAATTY | 6 cut(s) | 102, 746, 1057, 2316, 2738, 2835 |
| AsiGI | ACCGGT | 1 cut(s) | 2665 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 333 |
| Asp718I | GGTACC | 1 cut(s) | 2263 |
| AspLEI | GCGC | 2 cut(s) | 84, 345 |
| AsuC2I | CCSGG | 1 cut(s) | 1642 |
| AsuHPI | GGTGA | 6 cut(s) | 624, 1458, 1823, 2477, 2812, 3158 |
| AvaII | GGWCC | 5 cut(s) | 650, 1038, 1438, 2033, 2663 |
| AxyI | CCTNAGG | 1 cut(s) | 24 |
| BaeGI | GKGCMC | 2 cut(s) | 32, 2937 |
| BalI | TGGCCA | 1 cut(s) | 714 |
| BanI | GGYRCC | 1 cut(s) | 2263 |
| BanII | GRGCYC | 5 cut(s) | 32, 1424, 1721, 2924, 3052 |
| BauI | CACGAG | 1 cut(s) | 656 |
| BbsI | GAAGAC | 2 cut(s) | 882, 2331 |
| Bbv12I | GWGCWC | 3 cut(s) | 517, 2242, 3052 |
| BccI | CCATC | 8 cut(s) | 69, 206, 704, 860, 1220, 1951, 2018, 2151 |
| BceAI | ACGGC | 1 cut(s) | 256 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1042, 1076 |
| BciVI | GTATCC | 1 cut(s) | 3045 |
| BcnI | CCSGG | 1 cut(s) | 1642 |
| BcoDI | GTCTC | 8 cut(s) | 231, 1005, 1249, 1809, 2221, 2259, 2569, 2857 |
| BcuI | ACTAGT | 1 cut(s) | 785 |
| BfaI | CTAG | 5 cut(s) | 159, 489, 786, 1308, 3012 |
| BfmI | CTRYAG | 5 cut(s) | 1022, 1346, 2397, 2691, 3198 |
| BfoI | RGCGCY | 1 cut(s) | 346 |
| BfrI | CTTAAG | 1 cut(s) | 2963 |
| BfuI | GTATCC | 1 cut(s) | 3045 |
| BglII | AGATCT | 1 cut(s) | 1811 |
| Bme18I | GGWCC | 5 cut(s) | 650, 1038, 1438, 2033, 2663 |
| BmiI | GGNNCC | 7 cut(s) | 30, 141, 1040, 1720, 2003, 2265, 2664 |
| BpiI | GAAGAC | 2 cut(s) | 882, 2331 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1078, 1110 |
| BpmI | CTGGAG | 6 cut(s) | 244, 933, 1080, 2241, 2256, 2861 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1206 |
| BpuEI | CTTGAG | 2 cut(s) | 380, 1811 |
| BpuMI | CCSGG | 1 cut(s) | 1642 |
| Bsa29I | ATCGAT | 1 cut(s) | 3159 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1080 |
| BsaJI | CCNNGG | 7 cut(s) | 313, 479, 1041, 1102, 1320, 1434, 3138 |
| BsaWI | WCCGGW | 3 cut(s) | 457, 584, 2665 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1386, 1416 |
| Bse118I | RCCGGY | 1 cut(s) | 2665 |
| Bse1I | ACTGG | 5 cut(s) | 227, 715, 916, 1602, 2881 |
| Bse21I | CCTNAGG | 1 cut(s) | 24 |
| Bse3DI | GCAATG | 3 cut(s) | 511, 980, 1096 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1080 |
| BseAI | TCCGGA | 1 cut(s) | 584 |
| BseCI | ATCGAT | 1 cut(s) | 3159 |
| BseDI | CCNNGG | 7 cut(s) | 313, 479, 1041, 1102, 1320, 1434, 3138 |
| BseGI | GGATG | 8 cut(s) | 217, 360, 1962, 2162, 2562, 2623, 2953, 3184 |
| BseJI | GATNNNNATC | 1 cut(s) | 1080 |
| BseMI | GCAATG | 3 cut(s) | 511, 980, 1096 |
| BseMII | CTCAG | 8 cut(s) | 38, 185, 633, 1023, 1076, 1197, 1377, 1799 |
| BseNI | ACTGG | 5 cut(s) | 227, 715, 916, 1602, 2881 |
| BseRI | GAGGAG | 2 cut(s) | 974, 2587 |
| BseSI | GKGCMC | 2 cut(s) | 32, 2937 |
| BsgI | GTGCAG | 2 cut(s) | 1163, 2247 |
| BshFI | GGCC | 8 cut(s) | 30, 260, 714, 742, 1101, 2102, 2777, 3137 |
| BshNI | GGYRCC | 1 cut(s) | 2263 |
| BshTI | ACCGGT | 1 cut(s) | 2665 |
| BshVI | ATCGAT | 1 cut(s) | 3159 |
| BsiHKAI | GWGCWC | 3 cut(s) | 517, 2242, 3052 |
| BsiSI | CCGG | 5 cut(s) | 458, 585, 1641, 2615, 2666 |
| BslFI | GGGAC | 5 cut(s) | 1024, 1634, 2676, 2802, 2887 |
| BsmAI | GTCTC | 8 cut(s) | 231, 1005, 1249, 1809, 2221, 2259, 2569, 2857 |
| BsmBI | CGTCTC | 4 cut(s) | 231, 2259, 2569, 2857 |
| BsmFI | GGGAC | 5 cut(s) | 1024, 1634, 2676, 2802, 2887 |
| BsmI | GAATGC | 3 cut(s) | 688, 2180, 2616 |
| BsnI | GGCC | 8 cut(s) | 30, 260, 714, 742, 1101, 2102, 2777, 3137 |
| Bsp120I | GGGCCC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 8 cut(s) | 32, 517, 1424, 1721, 2242, 2924, 2937, 3052 |
| Bsp13I | TCCGGA | 1 cut(s) | 584 |
| Bsp1407I | TGTACA | 1 cut(s) | 1992 |
| Bsp19I | CCATGG | 1 cut(s) | 313 |
| BspACI | CCGC | 3 cut(s) | 5, 818, 2123 |
| BspANI | GGCC | 8 cut(s) | 30, 260, 714, 742, 1101, 2102, 2777, 3137 |
| BspCNI | CTCAG | 8 cut(s) | 37, 186, 632, 1024, 1077, 1198, 1378, 1800 |
| BspDI | ATCGAT | 1 cut(s) | 3159 |
| BspEI | TCCGGA | 1 cut(s) | 584 |
| BspHI | TCATGA | 1 cut(s) | 706 |
| BspLI | GGNNCC | 7 cut(s) | 30, 141, 1040, 1720, 2003, 2265, 2664 |
| BspMAI | CTGCAG | 4 cut(s) | 1026, 1350, 2401, 2695 |
| BspPI | GGATC | 9 cut(s) | 22, 468, 829, 1053, 1385, 2225, 2243, 3130, 3159 |
| BspQI | GCTCTTC | 1 cut(s) | 3040 |
| BspT107I | GGYRCC | 1 cut(s) | 2263 |
| BspTI | CTTAAG | 1 cut(s) | 2963 |
| BsrDI | GCAATG | 3 cut(s) | 511, 980, 1096 |
| BsrFI | RCCGGY | 1 cut(s) | 2665 |
| BsrGI | TGTACA | 1 cut(s) | 1992 |
| BsrI | ACTGG | 5 cut(s) | 227, 715, 916, 1602, 2881 |
| BssAI | RCCGGY | 1 cut(s) | 2665 |
| BssECI | CCNNGG | 7 cut(s) | 313, 479, 1041, 1102, 1320, 1434, 3138 |
| BssNAI | GTATAC | 2 cut(s) | 736, 2540 |
| BssSI | CACGAG | 1 cut(s) | 656 |
| BssT1I | CCWWGG | 3 cut(s) | 313, 1102, 1320 |
| Bst1107I | GTATAC | 2 cut(s) | 736, 2540 |
| Bst2BI | CACGAG | 1 cut(s) | 656 |
| Bst4CI | ACNGT | 9 cut(s) | 250, 1637, 1803, 1927, 2116, 2203, 2465, 2484, 3059 |
| Bst6I | CTCTTC | 3 cut(s) | 1272, 1890, 3040 |
| BstAFI | CTTAAG | 1 cut(s) | 2963 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1141 |
| BstAUI | TGTACA | 1 cut(s) | 1992 |
| BstC8I | GCNNGC | 2 cut(s) | 541, 2625 |
| BstDEI | CTNAG | 9 cut(s) | 24, 107, 194, 619, 1032, 1085, 1206, 1386, 1808 |
| BstDSI | CCRYGG | 1 cut(s) | 313 |
| BstEII | GGTNACC | 1 cut(s) | 1829 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 953 |
| BstF5I | GGATG | 8 cut(s) | 217, 360, 1962, 2162, 2562, 2623, 2953, 3184 |
| BstH2I | RGCGCY | 1 cut(s) | 346 |
| BstHHI | GCGC | 2 cut(s) | 84, 345 |
| BstMAI | GTCTC | 8 cut(s) | 231, 1005, 1249, 1809, 2221, 2259, 2569, 2857 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 549, 1141, 2291, 2525, 2620, 2687 |
| BstNSI | RCATGY | 1 cut(s) | 1913 |
| BstPI | GGTNACC | 1 cut(s) | 1829 |
| BstSFI | CTRYAG | 5 cut(s) | 1022, 1346, 2397, 2691, 3198 |
| BstSLI | GKGCMC | 2 cut(s) | 32, 2937 |
| BstV2I | GAAGAC | 2 cut(s) | 882, 2331 |
| BstX2I | RGATCY | 5 cut(s) | 460, 821, 1811, 2230, 3151 |
| BstYI | RGATCY | 5 cut(s) | 460, 821, 1811, 2230, 3151 |
| BstZ17I | GTATAC | 2 cut(s) | 736, 2540 |
| Bsu15I | ATCGAT | 1 cut(s) | 3159 |
| Bsu36I | CCTNAGG | 1 cut(s) | 24 |
| BsuI | GTATCC | 1 cut(s) | 3045 |
| BsuRI | GGCC | 8 cut(s) | 30, 260, 714, 742, 1101, 2102, 2777, 3137 |
| BsuTUI | ATCGAT | 1 cut(s) | 3159 |
| BtgI | CCRYGG | 1 cut(s) | 313 |
| BtsCI | GGATG | 8 cut(s) | 217, 360, 1962, 2162, 2562, 2623, 2953, 3184 |
| BtsI | GCAGTG | 6 cut(s) | 289, 298, 683, 1019, 1380, 1758 |
| Cac8I | GCNNGC | 2 cut(s) | 541, 2625 |
| CaiI | CAGNNNCTG | 3 cut(s) | 480, 1490, 2234 |
| CciI | TCATGA | 1 cut(s) | 706 |
| CfoI | GCGC | 2 cut(s) | 84, 345 |
| Cfr10I | RCCGGY | 1 cut(s) | 2665 |
| ClaI | ATCGAT | 1 cut(s) | 3159 |
| CsiI | ACCWGGT | 2 cut(s) | 2793, 2822 |
| Csp6I | GTAC | 4 cut(s) | 19, 1480, 1993, 2264 |
| CspAI | ACCGGT | 1 cut(s) | 2665 |
| CviQI | GTAC | 4 cut(s) | 19, 1480, 1993, 2264 |
| DdeI | CTNAG | 9 cut(s) | 24, 107, 194, 619, 1032, 1085, 1206, 1386, 1808 |
| DraI | TTTAAA | 1 cut(s) | 2359 |
| DraIII | CACNNNGTG | 3 cut(s) | 161, 815, 2659 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2251 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2251 |
| EaeI | YGGCCR | 1 cut(s) | 712 |
| Eam1104I | CTCTTC | 3 cut(s) | 1272, 1890, 3040 |
| EarI | CTCTTC | 3 cut(s) | 1272, 1890, 3040 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 3050 |
| Eco130I | CCWWGG | 3 cut(s) | 313, 1102, 1320 |
| Eco147I | AGGCCT | 1 cut(s) | 1101 |
| Eco24I | GRGCYC | 5 cut(s) | 32, 1424, 1721, 2924, 3052 |
| Eco47I | GGWCC | 5 cut(s) | 650, 1038, 1438, 2033, 2663 |
| Eco53kI | GAGCTC | 1 cut(s) | 3050 |
| Eco57I | CTGAAG | 5 cut(s) | 504, 1809, 1907, 2073, 2510 |
| Eco81I | CCTNAGG | 1 cut(s) | 24 |
| Eco91I | GGTNACC | 1 cut(s) | 1829 |
| EcoICRI | GAGCTC | 1 cut(s) | 3050 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 953 |
| EcoO109I | RGGNCCY | 2 cut(s) | 28, 29 |
| EcoO65I | GGTNACC | 1 cut(s) | 1829 |
| EcoRI | GAATTC | 2 cut(s) | 2738, 2835 |
| EcoT14I | CCWWGG | 3 cut(s) | 313, 1102, 1320 |
| EcoT22I | ATGCAT | 2 cut(s) | 883, 1776 |
| EcoT38I | GRGCYC | 5 cut(s) | 32, 1424, 1721, 2924, 3052 |
| ErhI | CCWWGG | 3 cut(s) | 313, 1102, 1320 |
| Esp3I | CGTCTC | 4 cut(s) | 231, 2259, 2569, 2857 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1149, 1181 |
| FaqI | GGGAC | 5 cut(s) | 1024, 1634, 2676, 2802, 2887 |
| FauI | CCCGC | 2 cut(s) | 811, 2116 |
| FblI | GTMKAC | 3 cut(s) | 735, 2539, 3061 |
| FokI | GGATG | 8 cut(s) | 224, 367, 1969, 2169, 2569, 2630, 2960, 3191 |
| FriOI | GRGCYC | 5 cut(s) | 32, 1424, 1721, 2924, 3052 |
| FspBI | CTAG | 5 cut(s) | 159, 489, 786, 1308, 3012 |
| GlaI | GCGC | 2 cut(s) | 83, 344 |
| GsuI | CTGGAG | 6 cut(s) | 244, 933, 1080, 2241, 2256, 2861 |
| HaeII | RGCGCY | 1 cut(s) | 346 |
| HaeIII | GGCC | 8 cut(s) | 30, 260, 714, 742, 1101, 2102, 2777, 3137 |
| HapII | CCGG | 5 cut(s) | 458, 585, 1641, 2615, 2666 |
| HhaI | GCGC | 2 cut(s) | 84, 345 |
| Hin6I | GCGC | 2 cut(s) | 82, 343 |
| HinP1I | GCGC | 2 cut(s) | 82, 343 |
| HincII | GTYRAC | 1 cut(s) | 1297 |
| HindII | GTYRAC | 1 cut(s) | 1297 |
| HpaII | CCGG | 5 cut(s) | 458, 585, 1641, 2615, 2666 |
| HphI | GGTGA | 6 cut(s) | 624, 1458, 1823, 2477, 2812, 3158 |
| Hpy166II | GTNNAC | 9 cut(s) | 661, 736, 1297, 1482, 1799, 1995, 2540, 2882, 3062 |
| Hpy8I | GTNNAC | 9 cut(s) | 661, 736, 1297, 1482, 1799, 1995, 2540, 2882, 3062 |
| HpyCH4III | ACNGT | 9 cut(s) | 250, 1637, 1803, 1927, 2116, 2203, 2465, 2484, 3059 |
| HpyCH4IV | ACGT | 2 cut(s) | 1786, 2866 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 549, 1141, 2291, 2525, 2620, 2687 |
| HpyF3I | CTNAG | 9 cut(s) | 24, 107, 194, 619, 1032, 1085, 1206, 1386, 1808 |
| HpySE526I | ACGT | 2 cut(s) | 1786, 2866 |
| HspAI | GCGC | 2 cut(s) | 82, 343 |
| Kpn2I | TCCGGA | 1 cut(s) | 584 |
| KpnI | GGTACC | 1 cut(s) | 2267 |
| LguI | GCTCTTC | 1 cut(s) | 3040 |
| LmnI | GCTCC | 7 cut(s) | 139, 1099, 1630, 1724, 1947, 2007, 2237 |
| MabI | ACCWGGT | 2 cut(s) | 2793, 2822 |
| MaeI | CTAG | 5 cut(s) | 159, 489, 786, 1308, 3012 |
| MaeII | ACGT | 2 cut(s) | 1786, 2866 |
| MfeI | CAATTG | 1 cut(s) | 2095 |
| MflI | RGATCY | 5 cut(s) | 460, 821, 1811, 2230, 3151 |
| MhlI | GDGCHC | 8 cut(s) | 32, 517, 1424, 1721, 2242, 2924, 2937, 3052 |
| MlsI | TGGCCA | 1 cut(s) | 714 |
| MluNI | TGGCCA | 1 cut(s) | 714 |
| MlyI | GAGTC | 5 cut(s) | 638, 773, 1481, 2345, 2489 |
| MmeI | TCCRAC | 6 cut(s) | 1695, 2702, 2812, 2840, 2917, 3156 |
| Mox20I | TGGCCA | 1 cut(s) | 714 |
| Mph1103I | ATGCAT | 2 cut(s) | 883, 1776 |
| MroI | TCCGGA | 1 cut(s) | 584 |
| MroXI | GAANNNNTTC | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 714 |
| MslI | CAYNNNNRTG | 3 cut(s) | 565, 1471, 3191 |
| Msp20I | TGGCCA | 1 cut(s) | 714 |
| MspA1I | CMGCKG | 2 cut(s) | 1554, 2081 |
| MspCI | CTTAAG | 1 cut(s) | 2963 |
| MspI | CCGG | 5 cut(s) | 458, 585, 1641, 2615, 2666 |
| MunI | CAATTG | 1 cut(s) | 2095 |
| Mva1269I | GAATGC | 3 cut(s) | 688, 2180, 2616 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 549, 1141, 2291, 2525, 2620, 2687 |
| NciI | CCSGG | 1 cut(s) | 1642 |
| NcoI | CCATGG | 1 cut(s) | 313 |
| NlaIV | GGNNCC | 7 cut(s) | 30, 141, 1040, 1720, 2003, 2265, 2664 |
| NmeAIII | GCCGAG | 1 cut(s) | 3163 |
| NmuCI | GTSAC | 4 cut(s) | 630, 1829, 2306, 2484 |
| NsiI | ATGCAT | 2 cut(s) | 883, 1776 |
| NspI | RCATGY | 1 cut(s) | 1913 |
| OliI | CACNNNNGTG | 1 cut(s) | 1471 |
| PagI | TCATGA | 1 cut(s) | 706 |
| PceI | AGGCCT | 1 cut(s) | 1101 |
| PciSI | GCTCTTC | 1 cut(s) | 3040 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 143, 2890 |
| PctI | GAATGC | 3 cut(s) | 688, 2180, 2616 |
| PdmI | GAANNNNTTC | 1 cut(s) | 333 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 161, 1103 |
| PfoI | TCCNGGA | 1 cut(s) | 2233 |
| PinAI | ACCGGT | 1 cut(s) | 2665 |
| PleI | GAGTC | 5 cut(s) | 637, 773, 1481, 2344, 2489 |
| PpsI | GAGTC | 5 cut(s) | 637, 773, 1481, 2344, 2489 |
| PsiI | TTATAA | 2 cut(s) | 1970, 2010 |
| Psp124BI | GAGCTC | 1 cut(s) | 3052 |
| PspEI | GGTNACC | 1 cut(s) | 1829 |
| PspN4I | GGNNCC | 7 cut(s) | 30, 141, 1040, 1720, 2003, 2265, 2664 |
| PspOMI | GGGCCC | 1 cut(s) | 28 |
| PstI | CTGCAG | 4 cut(s) | 1026, 1350, 2401, 2695 |
| PstNI | CAGNNNCTG | 3 cut(s) | 480, 1490, 2234 |
| PsuI | RGATCY | 5 cut(s) | 460, 821, 1811, 2230, 3151 |
| PvuII | CAGCTG | 2 cut(s) | 1554, 2081 |
| RsaI | GTAC | 4 cut(s) | 20, 1481, 1994, 2265 |
| RsaNI | GTAC | 4 cut(s) | 19, 1480, 1993, 2264 |
| RseI | CAYNNNNRTG | 3 cut(s) | 565, 1471, 3191 |
| SacI | GAGCTC | 1 cut(s) | 3052 |
| SapI | GCTCTTC | 1 cut(s) | 3040 |
| SchI | GAGTC | 5 cut(s) | 638, 773, 1481, 2345, 2489 |
| SduI | GDGCHC | 8 cut(s) | 32, 517, 1424, 1721, 2242, 2924, 2937, 3052 |
| SexAI | ACCWGGT | 2 cut(s) | 2793, 2822 |
| SfcI | CTRYAG | 5 cut(s) | 1022, 1346, 2397, 2691, 3198 |
| SinI | GGWCC | 5 cut(s) | 650, 1038, 1438, 2033, 2663 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 565, 1471, 3191 |
| SmlI | CTYRAG | 3 cut(s) | 359, 1790, 2963 |
| SmoI | CTYRAG | 3 cut(s) | 359, 1790, 2963 |
| SpeI | ACTAGT | 1 cut(s) | 785 |
| SseBI | AGGCCT | 1 cut(s) | 1101 |
| SsiI | CCGC | 3 cut(s) | 5, 818, 2123 |
| SspI | AATATT | 1 cut(s) | 837 |
| SspMI | CTAG | 5 cut(s) | 159, 489, 786, 1308, 3012 |
| SstI | GAGCTC | 1 cut(s) | 3052 |
| StuI | AGGCCT | 1 cut(s) | 1101 |
| StyI | CCWWGG | 3 cut(s) | 313, 1102, 1320 |
| TaaI | ACNGT | 9 cut(s) | 250, 1637, 1803, 1927, 2116, 2203, 2465, 2484, 3059 |
| TaiI | ACGT | 2 cut(s) | 1789, 2869 |
| TaqI | TCGA | 7 cut(s) | 34, 1052, 1273, 1858, 3078, 3117, 3159 |
| TaqII | GACCGA | 1 cut(s) | 2261 |
| TatI | WGTACW | 1 cut(s) | 1992 |
| TseFI | GTSAC | 4 cut(s) | 630, 1829, 2306, 2484 |
| Tsp45I | GTSAC | 4 cut(s) | 630, 1829, 2306, 2484 |
| TspGWI | ACGGA | 3 cut(s) | 2241, 2455, 3077 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 161, 1103 |
| Vha464I | CTTAAG | 1 cut(s) | 2963 |
| VpaK11BI | GGWCC | 5 cut(s) | 650, 1038, 1438, 2033, 2663 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 953 |
| XapI | RAATTY | 6 cut(s) | 102, 746, 1057, 2316, 2738, 2835 |
| XceI | RCATGY | 1 cut(s) | 1913 |
| XmiI | GTMKAC | 3 cut(s) | 735, 2539, 3061 |
| XmnI | GAANNNNTTC | 1 cut(s) | 333 |
| XspI | CTAG | 5 cut(s) | 159, 489, 786, 1308, 3012 |
| Zsp2I | ATGCAT | 2 cut(s) | 883, 1776 |