Rroxscaffold_3G00240090

calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001204
Physical Location & Seq
Reverse (-)
31644281 .. 31652108
7828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00240090.1

Sequence Viewer

Length: 2664 bp
ATGCTTGATATTCATTTACAACACATTGTTCTTGTGCATTACAGAATGGTTGAGGGGAGCAAGTCTGGTGTCTCCCGTTTGCTGGTTGATCCAGGATCACAGGTTGGAAGCCCTCAAACTGCTTCAGCACCTTGCTCTGCACAAGCAAACTCACCTGCCCCTACAGTTCAAACATCTTTTGCTTCAAGTCCAATCAAAGTTGACTGGAATGAACAAACATTATCTACAGAATTTGAGGATGTGGATTCTCGGGGTGATCCTGGAGCTTCGTCTCTTGCTCAACCTATGCCTGGTTCTGTTTTGAACAATGCTTGTCTACAGTTACCAGAAGTTGGAAGACTTTCTGAGTCATTCAGGAATCCTTCTGGTACATGGTATGCCGGACCTAAAGATTATCAAAGTGCTGGTTCATCTGACTGGGCCATGAACAGATCAACAAGAGAGTCCAGCCTGCATGACCAAAACCTTTTTGTTGAAGACATAAAGAAAAATTTCTTTGAAGAACTTAATGGATCGGATTCCATAACTCATAAGCTAACAGACGCTAGACTGGATGGTAATAGGAAAGGCAAAGATGTAACTTGTGAAGATAGGTTGACCAATGACATAGATGTGCAGGCTGTCACAACCCCTTCCCAGAGAGAAGCTCAGGTTGCAAAGGAATTTGACTTCAGTCTGTTCCATTCCCAGTTTCAGGGCCATTCTGATCCTCACACAGTAGCTTTTTCTACTGCCCAAGTTGAGAAGAGTTCTGGAGATGGTGGTGTGTGTAGAGGTGAACCAGTAGAGCTGAAGAAACTCGACAGCTTTGGTAGATGGATGGATAAAGAAATTGGTGTGGATTGTGATGATTCGTTGATGGCTTCAGACTCTGGAAATTACTGGAATACACTTGAGGCTGAGAATGGTGATAGGGAAGTTTCCAGTTTATCAGGCCATATGCAGCTAGATGTTGATTCACTTGGCCCTTCTCTTTCACAGGAACAACTATTTAGTATATGTGATTTTTCTCCAGATTGGTCTTATTCAGGAACTAAAACAAAGGTTTTAATAGTTGGAAGATTTTTAGGAGGCAAGAAGAATTTTACTGAGACCAAGTGGGGATGCATGTTTGGTGAAATAGAGGTTCCTGCTGAAGTTCTGACTGATAATGTTATTCGATGTCAAACTCCTTTACATGCTCCTGGCTGTGTTCCATTCTATGTGACTTGCAGAAATAGGTTGGCCTGCAGTGAGGTGAGGGAGTTTGAATATAGAGAAAAACCTATCGGGATATCTCTAAACAGCTCTACAGAAGATGAATTGCGCTTTCAGATTCGTCTTGCAAAATTGTTGAACTTGGGATCAGAGAGGAAGTGGTTGGAATGTTCTGCTTTGGATTGTGATAAATGTAAGCTCAAAAGTTCCATATGTTCAATAAGAAGCAACAGCAGGAGTGATTGGATGATAGCTGATGGAGATTCTATGGCATGCAAACGTGATCAGTTGACCCACATGGATGTATTGATTCAGAATTTGTTGAAGGATAGACTTTTTGAATGGCTGGTATATAAAGTTCATGAAGAAGGTAAAGGACCACATGTTTTAGATAATGAAGGCCAAGGCGTTCTACATTTGGCAGCTGCTCTTGGTTATGAATGGGCGATGGGTCTCATAGTTGCTGCTGGTGTCGGTCCTAATTTCAGAGATGCCCGTGGAAGAACGGGACTTCACTGGGCATCATATTTTGGAAGAGAGGAAACAGTGATCACATTACTTGGATTGGGTGCTGCTCCAGGTGCTGTTGAGGACCCAACGCCAGCATTTCCTGGAGGACAAACAGCCGCTGATCTAGCCTCAAGTAGAGGCCACAAAGGGATTGCTGGATATTTGGCAGAAGCTGATCTAACCAGTCACCTGTCATTATTGACCATCAATGAGAAAACAATGGATAATGTTTCCGCAACTATTGCAGCTGAAAAGGCTATCGAGATTTCAGAAGCTATAACATCTGATGTGACGGTAGATGATGAAAATTCTCTGAAAGGTTCTCTAGCAGCAGTTAGGAAATCAGCCCATGCGGTTGCTCTGATTCAAGCGACTTTCCGTGCTCGTTCATTCCGCCAGAGACAATTAACTAAGAGCAGCATTGATATTCCTGAAGCTTCTATTGACCTAGTTGCACTTGGTTCCTTGAAGAGAGTTCAAAAGTTTAGTCACTATGAAGATTATCTGCATTCTGCAGCAGCTCTGAAGATACAAAGAAAATATCGTGGTTGGAAGGGGAGAAAGGAATTTTTGAAGATACGCAACCGTATTGTCAAACTTCAGGCTCATGTGAGGGGACATCAGGTTCGTAAGAATTACAAAAAGCTTGTTTGGTCTGTTGGTATAATGGAGAAAGTAATATTGCGTTGGAGGCGGAAACGGCCTGGTTTGCGAGGATTTCGGGTGGAAAAGGCTATTGAAGATGTATCTTCAGAGAATAAAAGAATTGATGACTATGAATTTTTGAGTGTTGGGAGGAAGCAGAAATTTGCTGGAGTTGAGAAAGCTCTTGCAAGGGTACAGTCCATGTCTCGTCACCCTGAAGCACGTGAACAGTATATGAGGTTACAGTCAAAGTTTGAGAAGCTTAAGATGGCTGATGGGAGTGGTGCCCCAAATAAAATTGAAGGTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 CG-1 IQ TIG

Protein Analysis

887

Amino Acids

98.31

Weight (kDa)

6.67

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 512 - 590 5.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 537 - 629 6.7e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 163
Acc36I ACCTGC 1 cut(s) 163
AccB1I GGYRCC 1 cut(s) 2636
AccB7I CCANNNNNTGG 1 cut(s) 332
AccI GTMKAC 1 cut(s) 316
AciI CCGC 5 cut(s) 1824, 1941, 2060, 2101, 2401
AclWI GGATC 6 cut(s) 83, 103, 251, 520, 701, 1351
AcsI RAATTY 9 cut(s) 230, 490, 662, 1081, 1513, 2014, 2273, 2486, 2513
AcvI CACGTG 1 cut(s) 2576
AfaI GTAC 2 cut(s) 370, 2547
AfiI CCNNNNNNNGG 4 cut(s) 82, 290, 332, 694
AflII CTTAAG 1 cut(s) 2615
AflIII ACRYGT 1 cut(s) 1579
AjnI CCWGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
AloI GAACNNNNNNTCC 2 cut(s) 2316, 2348
Alw21I GWGCWC 1 cut(s) 2092
Alw26I GTCTC 6 cut(s) 76, 276, 1085, 1655, 2101, 2562
AlwI GGATC 6 cut(s) 83, 103, 251, 520, 701, 1351
AlwNI CAGNNNCTG 4 cut(s) 872, 1781, 1826, 1880
Ama87I CYCGRG 1 cut(s) 249
AoxI GGCC 8 cut(s) 420, 697, 934, 964, 1224, 1597, 1846, 2408
ApoI RAATTY 9 cut(s) 230, 490, 662, 1081, 1513, 2014, 2273, 2486, 2513
ArsI GACNNNNNNTTYG 4 cut(s) 2179, 2211, 2316, 2348
Asp700I GAANNNNTTC 2 cut(s) 340, 491
AspLEI GCGC 1 cut(s) 1308
AspS9I GGNCC 7 cut(s) 383, 420, 697, 965, 1574, 1673, 1789
AsuHPI GGTGA 8 cut(s) 144, 266, 788, 920, 1127, 1249, 1886, 2555
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 4 cut(s) 383, 1574, 1673, 1789
BaeGI GKGCMC 1 cut(s) 2641
BanI GGYRCC 1 cut(s) 2636
BbrPI CACGTG 1 cut(s) 2576
BbsI GAAGAC 2 cut(s) 343, 483
Bbv12I GWGCWC 1 cut(s) 2092
BceAI ACGGC 1 cut(s) 2423
BciT130I CCWGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
BclI TGATCA 2 cut(s) 1480, 1746
BcoDI GTCTC 6 cut(s) 76, 276, 1085, 1655, 2101, 2562
BfaI CTAG 5 cut(s) 546, 947, 1832, 2033, 2156
BfmI CTRYAG 6 cut(s) 162, 225, 317, 1228, 1290, 2220
BfrI CTTAAG 1 cut(s) 2615
BfuAI ACCTGC 1 cut(s) 163
Bme1390I CCNGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
Bme18I GGWCC 4 cut(s) 383, 1574, 1673, 1789
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 7 cut(s) 383, 420, 697, 965, 1574, 1673, 1789
BmiI GGNNCC 4 cut(s) 1128, 1791, 2170, 2638
BmrFI CCNGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
BmrI ACTGGG 3 cut(s) 427, 682, 1723
BmsI GCATC 3 cut(s) 1094, 1678, 1727
BmuI ACTGGG 3 cut(s) 427, 682, 1723
BoxI GACNNNNGTC 1 cut(s) 672
BpiI GAAGAC 2 cut(s) 343, 483
BplI GAGNNNNNCTC 2 cut(s) 631, 663
BpmI CTGGAG 6 cut(s) 282, 774, 996, 1758, 1830, 2541
Bpu10I CCTNAGC 1 cut(s) 648
BpuEI CTTGAG 2 cut(s) 914, 1822
BsaAI YACGTR 1 cut(s) 2576
BsaI GGTCTC 2 cut(s) 1085, 1655
BsaJI CCNNGG 2 cut(s) 1600, 1693
Bsc4I CCNNNNNNNGG 4 cut(s) 82, 290, 332, 694
Bse1I ACTGG 9 cut(s) 209, 422, 555, 688, 782, 887, 924, 1718, 1890
BseBI CCWGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
BseDI CCNNGG 2 cut(s) 1600, 1693
BseGI GGATG 6 cut(s) 244, 559, 825, 1109, 1449, 1504
BseLI CCNNNNNNNGG 4 cut(s) 82, 290, 332, 694
BseMII CTCAG 4 cut(s) 336, 662, 891, 1080
BseNI ACTGG 9 cut(s) 209, 422, 555, 688, 782, 887, 924, 1718, 1890
BseSI GKGCMC 1 cut(s) 2641
BsgI GTGCAG 2 cut(s) 123, 635
BshFI GGCC 8 cut(s) 422, 699, 936, 966, 1226, 1599, 1848, 2410
BshNI GGYRCC 1 cut(s) 2636
BsiHKAI GWGCWC 1 cut(s) 2092
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 1 cut(s) 381
BslFI GGGAC 2 cut(s) 1719, 2337
BslI CCNNNNNNNGG 4 cut(s) 82, 290, 332, 694
BsmAI GTCTC 6 cut(s) 76, 276, 1085, 1655, 2101, 2562
BsmBI CGTCTC 1 cut(s) 276
BsmFI GGGAC 2 cut(s) 1719, 2337
BsmI GAATGC 1 cut(s) 2215
BsnI GGCC 8 cut(s) 422, 699, 936, 966, 1226, 1599, 1848, 2410
Bso31I GGTCTC 2 cut(s) 1085, 1655
BsoBI CYCGRG 1 cut(s) 249
Bsp1286I GDGCHC 2 cut(s) 2092, 2641
BspACI CCGC 5 cut(s) 1824, 1941, 2060, 2101, 2401
BspANI GGCC 8 cut(s) 422, 699, 936, 966, 1226, 1599, 1848, 2410
BspCNI CTCAG 4 cut(s) 337, 661, 892, 1081
BspHI TCATGA 1 cut(s) 1558
BspLI GGNNCC 4 cut(s) 1128, 1791, 2170, 2638
BspMAI CTGCAG 2 cut(s) 1232, 2224
BspMI ACCTGC 1 cut(s) 163
BspPI GGATC 6 cut(s) 83, 103, 251, 520, 701, 1351
BspT107I GGYRCC 1 cut(s) 2636
BspTI CTTAAG 1 cut(s) 2615
BspTNI GGTCTC 2 cut(s) 1085, 1655
BsrI ACTGG 9 cut(s) 209, 422, 555, 688, 782, 887, 924, 1718, 1890
BssECI CCNNGG 2 cut(s) 1600, 1693
BssT1I CCWWGG 1 cut(s) 1600
Bst2UI CCWGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
Bst4CI ACNGT 9 cut(s) 166, 321, 718, 1744, 2002, 2294, 2550, 2583, 2598
Bst6I CTCTTC 3 cut(s) 740, 1726, 2171
BstAFI CTTAAG 1 cut(s) 2615
BstAPI GCANNNNNTGC 1 cut(s) 1949
BstBAI YACGTR 1 cut(s) 2576
BstC8I GCNNGC 5 cut(s) 452, 618, 1228, 1471, 1800
BstDEI CTNAG 5 cut(s) 345, 648, 900, 1089, 2118
BstDSI CCRYGG 1 cut(s) 1693
BstF5I GGATG 6 cut(s) 244, 559, 825, 1109, 1449, 1504
BstHHI GCGC 1 cut(s) 1308
BstMAI GTCTC 6 cut(s) 76, 276, 1085, 1655, 2101, 2562
BstMWI GCNNNNNNNGC 8 cut(s) 653, 1778, 1832, 1949, 1961, 2398, 2407, 2416
BstNI CCWGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
BstNSI RCATGY 4 cut(s) 1111, 1181, 1473, 1583
BstPAI GACNNNNGTC 1 cut(s) 672
BstSCI CCNGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
BstSFI CTRYAG 6 cut(s) 162, 225, 317, 1228, 1290, 2220
BstSLI GKGCMC 1 cut(s) 2641
BstV2I GAAGAC 2 cut(s) 343, 483
BsuRI GGCC 8 cut(s) 422, 699, 936, 966, 1226, 1599, 1848, 2410
BtgI CCRYGG 1 cut(s) 1693
BtgZI GCGATG 1 cut(s) 1658
BtsCI GGATG 6 cut(s) 244, 559, 825, 1109, 1449, 1504
BtsI GCAGTG 1 cut(s) 1237
BtsIMutI CAGTG 3 cut(s) 1237, 1711, 1749
BveI ACCTGC 1 cut(s) 163
Cac8I GCNNGC 5 cut(s) 452, 618, 1228, 1471, 1800
CaiI CAGNNNCTG 4 cut(s) 872, 1781, 1826, 1880
CciI TCATGA 1 cut(s) 1558
CfoI GCGC 1 cut(s) 1308
Cfr13I GGNCC 7 cut(s) 383, 420, 697, 965, 1574, 1673, 1789
CseI GACGC 1 cut(s) 551
Csp6I GTAC 2 cut(s) 369, 2546
CviQI GTAC 2 cut(s) 369, 2546
DdeI CTNAG 5 cut(s) 345, 648, 900, 1089, 2118
Eam1104I CTCTTC 3 cut(s) 740, 1726, 2171
EarI CTCTTC 3 cut(s) 740, 1726, 2171
EciI GGCGGA 2 cut(s) 2090, 2416
Eco130I CCWWGG 1 cut(s) 1600
Eco31I GGTCTC 2 cut(s) 1085, 1655
Eco32I GATATC 1 cut(s) 1275
Eco47I GGWCC 4 cut(s) 383, 1574, 1673, 1789
Eco72I CACGTG 1 cut(s) 2576
Eco88I CYCGRG 1 cut(s) 249
EcoO109I RGGNCCY 1 cut(s) 1789
EcoRII CCWGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
EcoRV GATATC 1 cut(s) 1275
EcoT14I CCWWGG 1 cut(s) 1600
EcoT22I ATGCAT 1 cut(s) 1109
ErhI CCWWGG 1 cut(s) 1600
Esp3I CGTCTC 1 cut(s) 276
FaqI GGGAC 2 cut(s) 1719, 2337
FauNDI CATATG 2 cut(s) 939, 1409
FbaI TGATCA 2 cut(s) 1480, 1746
FblI GTMKAC 1 cut(s) 316
FokI GGATG 6 cut(s) 251, 566, 832, 1116, 1456, 1511
FspBI CTAG 5 cut(s) 546, 947, 1832, 2033, 2156
GlaI GCGC 1 cut(s) 1307
GsuI CTGGAG 6 cut(s) 282, 774, 996, 1758, 1830, 2541
HaeIII GGCC 8 cut(s) 422, 699, 936, 966, 1226, 1599, 1848, 2410
HapII CCGG 1 cut(s) 381
HgaI GACGC 1 cut(s) 551
HhaI GCGC 1 cut(s) 1308
Hin6I GCGC 1 cut(s) 1306
HinP1I GCGC 1 cut(s) 1306
HincII GTYRAC 3 cut(s) 202, 597, 1488
HindII GTYRAC 3 cut(s) 202, 597, 1488
HindIII AAGCTT 3 cut(s) 2142, 2351, 2612
HpaII CCGG 1 cut(s) 381
HphI GGTGA 8 cut(s) 144, 266, 788, 920, 1127, 1249, 1886, 2555
Hpy166II GTNNAC 6 cut(s) 202, 317, 597, 779, 1488, 2579
Hpy188III TCNNGA 9 cut(s) 355, 753, 873, 1013, 1029, 1270, 1559, 1969, 2138
Hpy8I GTNNAC 6 cut(s) 202, 317, 597, 779, 1488, 2579
HpyAV CCTTC 8 cut(s) 372, 642, 978, 1516, 1559, 1589, 2254, 2648
HpyCH4III ACNGT 9 cut(s) 166, 321, 718, 1744, 2002, 2294, 2550, 2583, 2598
HpyCH4IV ACGT 2 cut(s) 1477, 2575
HpyF10VI GCNNNNNNNGC 8 cut(s) 653, 1778, 1832, 1949, 1961, 2398, 2407, 2416
HpyF3I CTNAG 5 cut(s) 345, 648, 900, 1089, 2118
HpySE526I ACGT 2 cut(s) 1477, 2575
HspAI GCGC 1 cut(s) 1306
Ksp22I TGATCA 2 cut(s) 1480, 1746
LmnI GCTCC 4 cut(s) 57, 263, 1186, 1777
LweI GCATC 3 cut(s) 1094, 1678, 1727
MaeI CTAG 5 cut(s) 546, 947, 1832, 2033, 2156
MaeII ACGT 2 cut(s) 1477, 2575
MaeIII GTNAC 9 cut(s) 321, 577, 622, 1204, 1892, 1996, 2195, 2561, 2592
MhlI GDGCHC 2 cut(s) 2092, 2641
MlyI GAGTC 3 cut(s) 356, 452, 863
MmeI TCCRAC 6 cut(s) 85, 313, 1036, 1341, 2237, 2375
Mph1103I ATGCAT 1 cut(s) 1109
MroXI GAANNNNTTC 2 cut(s) 340, 491
MseI TTAA 4 cut(s) 507, 1049, 2114, 2616
MslI CAYNNNNRTG 2 cut(s) 611, 1497
MspA1I CMGCKG 3 cut(s) 1622, 1826, 1955
MspCI CTTAAG 1 cut(s) 2615
MspI CCGG 1 cut(s) 381
MspR9I CCNGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
Mva1269I GAATGC 1 cut(s) 2215
MvaI CCWGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
MwoI GCNNNNNNNGC 8 cut(s) 653, 1778, 1832, 1949, 1961, 2398, 2407, 2416
NdeI CATATG 2 cut(s) 939, 1409
NlaIV GGNNCC 4 cut(s) 1128, 1791, 2170, 2638
NmuCI GTSAC 6 cut(s) 622, 1204, 1892, 1996, 2195, 2561
NsiI ATGCAT 1 cut(s) 1109
NspI RCATGY 4 cut(s) 1111, 1181, 1473, 1583
PaeI GCATGC 1 cut(s) 1473
PagI TCATGA 1 cut(s) 1558
PaqCI CACCTGC 1 cut(s) 163
PciI ACATGT 1 cut(s) 1579
PctI GAATGC 1 cut(s) 2215
PdmI GAANNNNTTC 2 cut(s) 340, 491
PfeI GAWTC 9 cut(s) 245, 358, 518, 851, 956, 1315, 1460, 1507, 2071
PflMI CCANNNNNTGG 1 cut(s) 332
PfoI TCCNGGA 3 cut(s) 91, 259, 1807
PleI GAGTC 3 cut(s) 355, 451, 863
PmaCI CACGTG 1 cut(s) 2576
PmlI CACGTG 1 cut(s) 2576
PpsI GAGTC 3 cut(s) 355, 451, 863
Ppu21I YACGTR 1 cut(s) 2576
PpuMI RGGWCCY 1 cut(s) 1789
PscI ACATGT 1 cut(s) 1579
PshAI GACNNNNGTC 1 cut(s) 672
Psp5II RGGWCCY 1 cut(s) 1789
Psp6I CCWGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
PspCI CACGTG 1 cut(s) 2576
PspGI CCWGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
PspN4I GGNNCC 4 cut(s) 1128, 1791, 2170, 2638
PspPI GGNCC 7 cut(s) 383, 420, 697, 965, 1574, 1673, 1789
PspPPI RGGWCCY 1 cut(s) 1789
PsrI GAACNNNNNNTAC 2 cut(s) 1539, 1571
PstI CTGCAG 2 cut(s) 1232, 2224
PstNI CAGNNNCTG 4 cut(s) 872, 1781, 1826, 1880
PvuII CAGCTG 2 cut(s) 1622, 1955
RsaI GTAC 2 cut(s) 370, 2547
RsaNI GTAC 2 cut(s) 369, 2546
RseI CAYNNNNRTG 2 cut(s) 611, 1497
SaqAI TTAA 4 cut(s) 507, 1049, 2114, 2616
Sau96I GGNCC 7 cut(s) 383, 420, 697, 965, 1574, 1673, 1789
SchI GAGTC 3 cut(s) 356, 452, 863
ScrFI CCNGG 7 cut(s) 93, 261, 291, 1185, 1776, 1809, 2412
SduI GDGCHC 2 cut(s) 2092, 2641
SfaNI GCATC 3 cut(s) 1094, 1678, 1727
SfcI CTRYAG 6 cut(s) 162, 225, 317, 1228, 1290, 2220
SinI GGWCC 4 cut(s) 383, 1574, 1673, 1789
SmiMI CAYNNNNRTG 2 cut(s) 611, 1497
SmlI CTYRAG 3 cut(s) 893, 1837, 2615
SmoI CTYRAG 3 cut(s) 893, 1837, 2615
SphI GCATGC 1 cut(s) 1473
SsiI CCGC 5 cut(s) 1824, 1941, 2060, 2101, 2401
SspI AATATT 1 cut(s) 2388
SspMI CTAG 5 cut(s) 546, 947, 1832, 2033, 2156
StyD4I CCNGG 7 cut(s) 91, 259, 289, 1183, 1774, 1807, 2410
StyI CCWWGG 1 cut(s) 1600
TaaI ACNGT 9 cut(s) 166, 321, 718, 1744, 2002, 2294, 2550, 2583, 2598
TaiI ACGT 2 cut(s) 1480, 2578
TaqI TCGA 3 cut(s) 801, 1159, 1968
TaqII GACCGA 1 cut(s) 1661
TauI GCSGC 1 cut(s) 1826
TfiI GAWTC 9 cut(s) 245, 358, 518, 851, 956, 1315, 1460, 1507, 2071
Tru1I TTAA 4 cut(s) 507, 1049, 2114, 2616
Tru9I TTAA 4 cut(s) 507, 1049, 2114, 2616
TscAI CASTG 3 cut(s) 1237, 1718, 1749
TseFI GTSAC 6 cut(s) 622, 1204, 1892, 1996, 2195, 2561
Tsp45I GTSAC 6 cut(s) 622, 1204, 1892, 1996, 2195, 2561
TspGWI ACGGA 1 cut(s) 2075
TspRI CASTG 3 cut(s) 1237, 1718, 1749
Van91I CCANNNNNTGG 1 cut(s) 332
Vha464I CTTAAG 1 cut(s) 2615
VpaK11BI GGWCC 4 cut(s) 383, 1574, 1673, 1789
XapI RAATTY 9 cut(s) 230, 490, 662, 1081, 1513, 2014, 2273, 2486, 2513
XceI RCATGY 4 cut(s) 1111, 1181, 1473, 1583
XmiI GTMKAC 1 cut(s) 316
XmnI GAANNNNTTC 2 cut(s) 340, 491
XspI CTAG 5 cut(s) 546, 947, 1832, 2033, 2156
Zsp2I ATGCAT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.