calmodulin-binding transcription activator
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 620, 660 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 901, 1760 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1579 |
| AccI | GTMKAC | 2 cut(s) | 131, 1708 |
| AccIII | TCCGGA | 1 cut(s) | 1564 |
| AciI | CCGC | 1 cut(s) | 575 |
| AclWI | GGATC | 2 cut(s) | 875, 893 |
| AcsI | RAATTY | 2 cut(s) | 1385, 1482 |
| AcuI | CTGAAG | 2 cut(s) | 459, 1160 |
| AfaI | GTAC | 1 cut(s) | 644 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 822, 823, 1319, 1431, 1432, 1579 |
| AgeI | ACCGGT | 1 cut(s) | 1312 |
| AgsI | TTSAA | 4 cut(s) | 355, 419, 1679, 1727 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 713 |
| AjnI | CCWGG | 6 cut(s) | 84, 537, 883, 1419, 1440, 1469 |
| AleI | CACNNNNGTG | 2 cut(s) | 121, 1105 |
| AluBI | AGCT | 8 cut(s) | 94, 204, 332, 625, 731, 1097, 1178, 1697 |
| AluI | AGCT | 8 cut(s) | 94, 204, 332, 625, 731, 1097, 1178, 1697 |
| Alw21I | GWGCWC | 3 cut(s) | 32, 892, 1699 |
| Alw26I | GTCTC | 4 cut(s) | 454, 459, 909, 1504 |
| AlwI | GGATC | 2 cut(s) | 875, 893 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 140, 884 |
| Aor13HI | TCCGGA | 1 cut(s) | 1564 |
| AoxI | GGCC | 5 cut(s) | 750, 1422, 1581, 1782, 1803 |
| ApeKI | GCWGC | 7 cut(s) | 563, 728, 731, 827, 1046, 1178, 1337 |
| ApoI | RAATTY | 2 cut(s) | 1385, 1482 |
| AsiGI | ACCGGT | 1 cut(s) | 1312 |
| AspS9I | GGNCC | 6 cut(s) | 88, 683, 750, 1310, 1423, 1567 |
| AsuC2I | CCSGG | 1 cut(s) | 292 |
| AsuHPI | GGTGA | 5 cut(s) | 108, 413, 1127, 1459, 1805 |
| AsuNHI | GCTAGC | 1 cut(s) | 328 |
| AvaII | GGWCC | 4 cut(s) | 88, 683, 1310, 1567 |
| BanII | GRGCYC | 3 cut(s) | 74, 371, 1699 |
| BbsI | GAAGAC | 1 cut(s) | 981 |
| Bbv12I | GWGCWC | 3 cut(s) | 32, 892, 1699 |
| BbvCI | CCTCAGC | 1 cut(s) | 702 |
| BbvI | GCAGC | 7 cut(s) | 575, 718, 740, 814, 1033, 1165, 1324 |
| BccI | CCATC | 6 cut(s) | 86, 398, 601, 668, 1034, 1500 |
| BceAI | ACGGC | 1 cut(s) | 48 |
| BciT130I | CCWGG | 6 cut(s) | 86, 539, 885, 1421, 1442, 1471 |
| BciVI | GTATCC | 1 cut(s) | 1182 |
| BcnI | CCSGG | 1 cut(s) | 292 |
| BcoDI | GTCTC | 4 cut(s) | 454, 459, 909, 1504 |
| BfaI | CTAG | 2 cut(s) | 329, 1659 |
| BfmI | CTRYAG | 4 cut(s) | 771, 1047, 1338, 1866 |
| BfuI | GTATCC | 1 cut(s) | 1182 |
| BglII | AGATCT | 1 cut(s) | 937 |
| BisI | GCNGC | 8 cut(s) | 564, 576, 729, 732, 828, 1047, 1179, 1338 |
| BlsI | GCNGC | 8 cut(s) | 565, 577, 730, 733, 829, 1048, 1180, 1339 |
| Bme1390I | CCNGG | 7 cut(s) | 86, 292, 539, 885, 1421, 1442, 1471 |
| Bme18I | GGWCC | 4 cut(s) | 88, 683, 1310, 1567 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 713 |
| BmgT120I | GGNCC | 6 cut(s) | 88, 683, 750, 1310, 1423, 1567 |
| BmiI | GGNNCC | 6 cut(s) | 234, 370, 653, 915, 1311, 1569 |
| BmrFI | CCNGG | 7 cut(s) | 86, 292, 539, 885, 1421, 1442, 1471 |
| BmsI | GCATC | 8 cut(s) | 433, 688, 792, 953, 1018, 1117, 1197, 1537 |
| BmtI | GCTAGC | 1 cut(s) | 332 |
| BpiI | GAAGAC | 1 cut(s) | 981 |
| BpmI | CTGGAG | 4 cut(s) | 521, 891, 906, 1508 |
| Bpu10I | CCTNAGC | 1 cut(s) | 702 |
| BpuEI | CTTGAG | 3 cut(s) | 461, 1570, 1595 |
| BpuMI | CCSGG | 1 cut(s) | 292 |
| BsaI | GGTCTC | 1 cut(s) | 454 |
| BsaJI | CCNNGG | 5 cut(s) | 23, 84, 736, 1785, 1806 |
| BsaWI | WCCGGW | 2 cut(s) | 1312, 1564 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 36, 66, 341, 371, 626, 656 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 822, 823, 1319, 1431, 1432, 1579 |
| Bse118I | RCCGGY | 1 cut(s) | 1312 |
| Bse1I | ACTGG | 2 cut(s) | 252, 1528 |
| BseAI | TCCGGA | 1 cut(s) | 1564 |
| BseBI | CCWGG | 6 cut(s) | 86, 539, 885, 1421, 1442, 1471 |
| BseDI | CCNNGG | 5 cut(s) | 23, 84, 736, 1785, 1806 |
| BseGI | GGATG | 5 cut(s) | 612, 1212, 1273, 1600, 1852 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 822, 823, 1319, 1431, 1432, 1579 |
| BseMII | CTCAG | 4 cut(s) | 449, 693, 984, 1227 |
| BseNI | ACTGG | 2 cut(s) | 252, 1528 |
| BseXI | GCAGC | 7 cut(s) | 575, 718, 740, 814, 1033, 1165, 1324 |
| BsgI | GTGCAG | 1 cut(s) | 897 |
| BshFI | GGCC | 5 cut(s) | 752, 1424, 1583, 1784, 1805 |
| BshTI | ACCGGT | 1 cut(s) | 1312 |
| BsiHKAI | GWGCWC | 3 cut(s) | 32, 892, 1699 |
| BsiSI | CCGG | 4 cut(s) | 291, 1265, 1313, 1565 |
| BslFI | GGGAC | 5 cut(s) | 284, 720, 1323, 1449, 1534 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 822, 823, 1319, 1431, 1432, 1579 |
| BsmAI | GTCTC | 4 cut(s) | 454, 459, 909, 1504 |
| BsmBI | CGTCTC | 2 cut(s) | 909, 1504 |
| BsmFI | GGGAC | 5 cut(s) | 284, 720, 1323, 1449, 1534 |
| BsmI | GAATGC | 1 cut(s) | 1266 |
| BsnI | GGCC | 5 cut(s) | 752, 1424, 1583, 1784, 1805 |
| Bso31I | GGTCTC | 1 cut(s) | 454 |
| Bsp1286I | GDGCHC | 5 cut(s) | 32, 74, 371, 892, 1699 |
| Bsp13I | TCCGGA | 1 cut(s) | 1564 |
| Bsp1407I | TGTACA | 1 cut(s) | 642 |
| Bsp143I | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| Bsp19I | CCATGG | 1 cut(s) | 23 |
| BspACI | CCGC | 1 cut(s) | 575 |
| BspANI | GGCC | 5 cut(s) | 752, 1424, 1583, 1784, 1805 |
| BspCNI | CTCAG | 4 cut(s) | 450, 694, 983, 1228 |
| BspEI | TCCGGA | 1 cut(s) | 1564 |
| BspLI | GGNNCC | 6 cut(s) | 234, 370, 653, 915, 1311, 1569 |
| BspMAI | CTGCAG | 3 cut(s) | 775, 1051, 1342 |
| BspOI | GCTAGC | 1 cut(s) | 332 |
| BspPI | GGATC | 2 cut(s) | 875, 893 |
| BspQI | GCTCTTC | 1 cut(s) | 1687 |
| BspTNI | GGTCTC | 1 cut(s) | 454 |
| BsrFI | RCCGGY | 1 cut(s) | 1312 |
| BsrGI | TGTACA | 1 cut(s) | 642 |
| BsrI | ACTGG | 2 cut(s) | 252, 1528 |
| BssAI | RCCGGY | 1 cut(s) | 1312 |
| BssECI | CCNNGG | 5 cut(s) | 23, 84, 736, 1785, 1806 |
| BssMI | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| BssNAI | GTATAC | 1 cut(s) | 132 |
| BssT1I | CCWWGG | 2 cut(s) | 23, 736 |
| Bst1107I | GTATAC | 1 cut(s) | 132 |
| Bst2UI | CCWGG | 6 cut(s) | 86, 539, 885, 1421, 1442, 1471 |
| Bst4CI | ACNGT | 9 cut(s) | 287, 453, 766, 853, 1115, 1134, 1230, 1247, 1706 |
| Bst6I | CTCTTC | 2 cut(s) | 540, 1687 |
| BstAUI | TGTACA | 1 cut(s) | 642 |
| BstC8I | GCNNGC | 2 cut(s) | 330, 573 |
| BstDEI | CTNAG | 4 cut(s) | 458, 702, 970, 1236 |
| BstDSI | CCRYGG | 1 cut(s) | 23 |
| BstF5I | GGATG | 5 cut(s) | 612, 1212, 1273, 1600, 1852 |
| BstKTI | GATC | 5 cut(s) | 883, 901, 940, 1186, 1822 |
| BstMAI | GTCTC | 4 cut(s) | 454, 459, 909, 1504 |
| BstMBI | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 572, 941, 1175, 1334 |
| BstNI | CCWGG | 6 cut(s) | 86, 539, 885, 1421, 1442, 1471 |
| BstNSI | RCATGY | 1 cut(s) | 563 |
| BstSCI | CCNGG | 7 cut(s) | 84, 290, 537, 883, 1419, 1440, 1469 |
| BstSFI | CTRYAG | 4 cut(s) | 771, 1047, 1338, 1866 |
| BstV1I | GCAGC | 7 cut(s) | 575, 718, 740, 814, 1033, 1165, 1324 |
| BstV2I | GAAGAC | 1 cut(s) | 981 |
| BstX2I | RGATCY | 2 cut(s) | 880, 937 |
| BstYI | RGATCY | 2 cut(s) | 880, 937 |
| BstZ17I | GTATAC | 1 cut(s) | 132 |
| BsuI | GTATCC | 1 cut(s) | 1182 |
| BsuRI | GGCC | 5 cut(s) | 752, 1424, 1583, 1784, 1805 |
| BtgI | CCRYGG | 1 cut(s) | 23 |
| BtgZI | GCGATG | 2 cut(s) | 1519, 1830 |
| BtsCI | GGATG | 5 cut(s) | 612, 1212, 1273, 1600, 1852 |
| BtsI | GCAGTG | 1 cut(s) | 585 |
| BtsIMutI | CAGTG | 8 cut(s) | 259, 292, 585, 762, 890, 1130, 1136, 1252 |
| Cac8I | GCNNGC | 2 cut(s) | 330, 573 |
| CaiI | CAGNNNCTG | 2 cut(s) | 140, 884 |
| Cfr10I | RCCGGY | 1 cut(s) | 1312 |
| Cfr13I | GGNCC | 6 cut(s) | 88, 683, 750, 1310, 1423, 1567 |
| CsiI | ACCWGGT | 2 cut(s) | 1440, 1469 |
| Csp6I | GTAC | 1 cut(s) | 643 |
| CspAI | ACCGGT | 1 cut(s) | 1312 |
| CviAII | CATG | 6 cut(s) | 24, 560, 648, 1427, 1756, 1861 |
| CviQI | GTAC | 1 cut(s) | 643 |
| DdeI | CTNAG | 4 cut(s) | 458, 702, 970, 1236 |
| DpnI | GATC | 5 cut(s) | 882, 900, 939, 1185, 1821 |
| DpnII | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 901, 1760 |
| DriI | GACNNNNNGTC | 1 cut(s) | 713 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 901, 1760 |
| Eam1104I | CTCTTC | 2 cut(s) | 540, 1687 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 713 |
| EarI | CTCTTC | 2 cut(s) | 540, 1687 |
| Ecl136II | GAGCTC | 1 cut(s) | 1697 |
| Eco130I | CCWWGG | 2 cut(s) | 23, 736 |
| Eco24I | GRGCYC | 3 cut(s) | 74, 371, 1699 |
| Eco31I | GGTCTC | 1 cut(s) | 454 |
| Eco32I | GATATC | 1 cut(s) | 1831 |
| Eco47I | GGWCC | 4 cut(s) | 88, 683, 1310, 1567 |
| Eco53kI | GAGCTC | 1 cut(s) | 1697 |
| Eco57I | CTGAAG | 2 cut(s) | 459, 1160 |
| EcoICRI | GAGCTC | 1 cut(s) | 1697 |
| EcoRI | GAATTC | 2 cut(s) | 1385, 1482 |
| EcoRII | CCWGG | 6 cut(s) | 84, 537, 883, 1419, 1440, 1469 |
| EcoRV | GATATC | 1 cut(s) | 1831 |
| EcoT14I | CCWWGG | 2 cut(s) | 23, 736 |
| EcoT22I | ATGCAT | 1 cut(s) | 426 |
| EcoT38I | GRGCYC | 3 cut(s) | 74, 371, 1699 |
| ErhI | CCWWGG | 2 cut(s) | 23, 736 |
| Esp3I | CGTCTC | 2 cut(s) | 909, 1504 |
| FaeI | CATG | 6 cut(s) | 27, 563, 651, 1430, 1759, 1864 |
| FaqI | GGGAC | 5 cut(s) | 284, 720, 1323, 1449, 1534 |
| FatI | CATG | 6 cut(s) | 23, 559, 647, 1426, 1755, 1860 |
| FblI | GTMKAC | 2 cut(s) | 131, 1708 |
| Fnu4HI | GCNGC | 8 cut(s) | 564, 576, 729, 732, 828, 1047, 1179, 1338 |
| FokI | GGATG | 5 cut(s) | 619, 1219, 1280, 1607, 1859 |
| FriOI | GRGCYC | 3 cut(s) | 74, 371, 1699 |
| Fsp4HI | GCNGC | 8 cut(s) | 564, 576, 729, 732, 828, 1047, 1179, 1338 |
| FspBI | CTAG | 2 cut(s) | 329, 1659 |
| GluI | GCNGC | 8 cut(s) | 564, 576, 729, 732, 828, 1047, 1179, 1338 |
| GsuI | CTGGAG | 4 cut(s) | 521, 891, 906, 1508 |
| HaeIII | GGCC | 5 cut(s) | 752, 1424, 1583, 1784, 1805 |
| HapII | CCGG | 4 cut(s) | 291, 1265, 1313, 1565 |
| Hin1II | CATG | 6 cut(s) | 27, 563, 651, 1430, 1759, 1864 |
| HincII | GTYRAC | 3 cut(s) | 482, 1233, 1318 |
| HindII | GTYRAC | 3 cut(s) | 482, 1233, 1318 |
| HinfI | GANTC | 9 cut(s) | 59, 137, 505, 966, 986, 1145, 1536, 1561, 1731 |
| HpaI | GTTAAC | 1 cut(s) | 1233 |
| HpaII | CCGG | 4 cut(s) | 291, 1265, 1313, 1565 |
| HphI | GGTGA | 5 cut(s) | 108, 413, 1127, 1459, 1805 |
| Hpy166II | GTNNAC | 8 cut(s) | 132, 449, 482, 645, 1233, 1318, 1529, 1709 |
| Hpy8I | GTNNAC | 8 cut(s) | 132, 449, 482, 645, 1233, 1318, 1529, 1709 |
| HpyAV | CCTTC | 7 cut(s) | 483, 596, 625, 827, 1027, 1135, 1721 |
| HpyCH4III | ACNGT | 9 cut(s) | 287, 453, 766, 853, 1115, 1134, 1230, 1247, 1706 |
| HpyCH4IV | ACGT | 2 cut(s) | 436, 1513 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 572, 941, 1175, 1334 |
| HpyF3I | CTNAG | 4 cut(s) | 458, 702, 970, 1236 |
| HpySE526I | ACGT | 2 cut(s) | 436, 1513 |
| Hsp92II | CATG | 6 cut(s) | 27, 563, 651, 1430, 1759, 1864 |
| Kpn2I | TCCGGA | 1 cut(s) | 1564 |
| KspAI | GTTAAC | 1 cut(s) | 1233 |
| Kzo9I | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| LguI | GCTCTTC | 1 cut(s) | 1687 |
| LmnI | GCTCC | 6 cut(s) | 27, 280, 374, 597, 657, 887 |
| Lsp1109I | GCAGC | 7 cut(s) | 575, 718, 740, 814, 1033, 1165, 1324 |
| LweI | GCATC | 8 cut(s) | 433, 688, 792, 953, 1018, 1117, 1197, 1537 |
| MabI | ACCWGGT | 2 cut(s) | 1440, 1469 |
| MaeI | CTAG | 2 cut(s) | 329, 1659 |
| MaeII | ACGT | 2 cut(s) | 436, 1513 |
| MaeIII | GTNAC | 6 cut(s) | 190, 310, 766, 956, 1109, 1134 |
| MalI | GATC | 5 cut(s) | 882, 900, 939, 1185, 1821 |
| MboI | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| MboII | GAAGA | 8 cut(s) | 419, 557, 683, 981, 1049, 1632, 1704, 1787 |
| MflI | RGATCY | 2 cut(s) | 880, 937 |
| MhlI | GDGCHC | 5 cut(s) | 32, 74, 371, 892, 1699 |
| MlyI | GAGTC | 3 cut(s) | 131, 995, 1139 |
| MmeI | TCCRAC | 6 cut(s) | 345, 788, 1349, 1459, 1564, 1824 |
| Mph1103I | ATGCAT | 1 cut(s) | 426 |
| MroI | TCCGGA | 1 cut(s) | 1564 |
| MseI | TTAA | 6 cut(s) | 467, 498, 801, 1008, 1232, 1413 |
| MslI | CAYNNNNRTG | 3 cut(s) | 121, 1105, 1859 |
| MspA1I | CMGCKG | 3 cut(s) | 204, 575, 731 |
| MspI | CCGG | 4 cut(s) | 291, 1265, 1313, 1565 |
| MspR9I | CCNGG | 7 cut(s) | 86, 292, 539, 885, 1421, 1442, 1471 |
| Mva1269I | GAATGC | 1 cut(s) | 1266 |
| MvaI | CCWGG | 6 cut(s) | 86, 539, 885, 1421, 1442, 1471 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 572, 941, 1175, 1334 |
| NciI | CCSGG | 1 cut(s) | 292 |
| NcoI | CCATGG | 1 cut(s) | 23 |
| NdeII | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| NheI | GCTAGC | 1 cut(s) | 328 |
| NlaIII | CATG | 6 cut(s) | 27, 563, 651, 1430, 1759, 1864 |
| NlaIV | GGNNCC | 6 cut(s) | 234, 370, 653, 915, 1311, 1569 |
| NmeAIII | GCCGAG | 2 cut(s) | 1810, 1831 |
| NmuCI | GTSAC | 2 cut(s) | 956, 1134 |
| NsiI | ATGCAT | 1 cut(s) | 426 |
| NspI | RCATGY | 1 cut(s) | 563 |
| OliI | CACNNNNGTG | 2 cut(s) | 121, 1105 |
| PciSI | GCTCTTC | 1 cut(s) | 1687 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1537 |
| PctI | GAATGC | 1 cut(s) | 1266 |
| PfeI | GAWTC | 6 cut(s) | 59, 505, 966, 1536, 1561, 1731 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1579 |
| PfoI | TCCNGGA | 2 cut(s) | 537, 883 |
| PinAI | ACCGGT | 1 cut(s) | 1312 |
| PkrI | GCNGC | 8 cut(s) | 565, 577, 730, 733, 829, 1048, 1180, 1339 |
| PleI | GAGTC | 3 cut(s) | 131, 994, 1139 |
| PpsI | GAGTC | 3 cut(s) | 131, 994, 1139 |
| PsiI | TTATAA | 2 cut(s) | 620, 660 |
| Psp124BI | GAGCTC | 1 cut(s) | 1699 |
| Psp6I | CCWGG | 6 cut(s) | 84, 537, 883, 1419, 1440, 1469 |
| PspGI | CCWGG | 6 cut(s) | 84, 537, 883, 1419, 1440, 1469 |
| PspN4I | GGNNCC | 6 cut(s) | 234, 370, 653, 915, 1311, 1569 |
| PspPI | GGNCC | 6 cut(s) | 88, 683, 750, 1310, 1423, 1567 |
| PstI | CTGCAG | 3 cut(s) | 775, 1051, 1342 |
| PstNI | CAGNNNCTG | 2 cut(s) | 140, 884 |
| PsuI | RGATCY | 2 cut(s) | 880, 937 |
| PvuII | CAGCTG | 2 cut(s) | 204, 731 |
| RsaI | GTAC | 1 cut(s) | 644 |
| RsaNI | GTAC | 1 cut(s) | 643 |
| RseI | CAYNNNNRTG | 3 cut(s) | 121, 1105, 1859 |
| SacI | GAGCTC | 1 cut(s) | 1699 |
| SapI | GCTCTTC | 1 cut(s) | 1687 |
| SaqAI | TTAA | 6 cut(s) | 467, 498, 801, 1008, 1232, 1413 |
| SatI | GCNGC | 8 cut(s) | 564, 576, 729, 732, 828, 1047, 1179, 1338 |
| Sau3AI | GATC | 5 cut(s) | 880, 898, 937, 1183, 1819 |
| Sau96I | GGNCC | 6 cut(s) | 88, 683, 750, 1310, 1423, 1567 |
| SchI | GAGTC | 3 cut(s) | 131, 995, 1139 |
| ScrFI | CCNGG | 7 cut(s) | 86, 292, 539, 885, 1421, 1442, 1471 |
| SduI | GDGCHC | 5 cut(s) | 32, 74, 371, 892, 1699 |
| SexAI | ACCWGGT | 2 cut(s) | 1440, 1469 |
| SfaNI | GCATC | 8 cut(s) | 433, 688, 792, 953, 1018, 1117, 1197, 1537 |
| SfcI | CTRYAG | 4 cut(s) | 771, 1047, 1338, 1866 |
| SinI | GGWCC | 4 cut(s) | 88, 683, 1310, 1567 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 121, 1105, 1859 |
| SmlI | CTYRAG | 3 cut(s) | 440, 1585, 1610 |
| SmoI | CTYRAG | 3 cut(s) | 440, 1585, 1610 |
| SsiI | CCGC | 1 cut(s) | 575 |
| SspMI | CTAG | 2 cut(s) | 329, 1659 |
| SstI | GAGCTC | 1 cut(s) | 1699 |
| StyD4I | CCNGG | 7 cut(s) | 84, 290, 537, 883, 1419, 1440, 1469 |
| StyI | CCWWGG | 2 cut(s) | 23, 736 |
| TaaI | ACNGT | 9 cut(s) | 287, 453, 766, 853, 1115, 1134, 1230, 1247, 1706 |
| TaiI | ACGT | 2 cut(s) | 439, 1516 |
| TaqI | TCGA | 3 cut(s) | 508, 1764, 1833 |
| TatI | WGTACW | 1 cut(s) | 642 |
| TauI | GCSGC | 1 cut(s) | 578 |
| TfiI | GAWTC | 6 cut(s) | 59, 505, 966, 1536, 1561, 1731 |
| Tru1I | TTAA | 6 cut(s) | 467, 498, 801, 1008, 1232, 1413 |
| Tru9I | TTAA | 6 cut(s) | 467, 498, 801, 1008, 1232, 1413 |
| TscAI | CASTG | 8 cut(s) | 259, 292, 585, 769, 897, 1137, 1143, 1252 |
| TseFI | GTSAC | 2 cut(s) | 956, 1134 |
| TseI | GCWGC | 7 cut(s) | 563, 728, 731, 827, 1046, 1178, 1337 |
| Tsp45I | GTSAC | 2 cut(s) | 956, 1134 |
| TspDTI | ATGAA | 9 cut(s) | 615, 644, 809, 1037, 1272, 1276, 1284, 1812, 1849 |
| TspGWI | ACGGA | 4 cut(s) | 891, 1105, 1335, 1724 |
| TspRI | CASTG | 8 cut(s) | 259, 292, 585, 769, 897, 1137, 1143, 1252 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1579 |
| VpaK11BI | GGWCC | 4 cut(s) | 88, 683, 1310, 1567 |
| XapI | RAATTY | 2 cut(s) | 1385, 1482 |
| XceI | RCATGY | 1 cut(s) | 563 |
| XmiI | GTMKAC | 2 cut(s) | 131, 1708 |
| XspI | CTAG | 2 cut(s) | 329, 1659 |
| Zsp2I | ATGCAT | 1 cut(s) | 426 |