RchiOBHm_Chr7g0219321

calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001204
Physical Location & Seq
Forward (+)
37709032 .. 37717932
8901 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19630

Sequence Viewer

Length: 2979 bp
ATGGCTGAGATGAGAAAATACATCCCCAATCAGCAACTAGACCTTGTCCAGATATTGCAAGAATCACAGCAACGTTGGCTCCGGCCGACTGAAATTTGTGAAATACTGCGCAACTACCAAAGGTTTCAGTTAACCCCAGATCCACCCGTGAGGCCTCCAGCTGGTTCTTTGTTCCTCTTTGATCGTAAAGCACTTCGGTATTTTCGTAAAGATGGTCACCGCTGGAGGAAGAAAAAGGATGGAAAGACTGTCAAAGAAGCGCATGAAAAGTTGAAGGCTGGTAGTGTAGACGTTCTTCACTGTTACTATGCCCATGGGGAGGACAATGAGAATTTTCAGCGGAGGAGTTATTGGATGCTTGATACTCATTTACAACACATTGTTCTTGTGCATTACAGAATGGTTGAGGGGAGCAAGTCTGGTGTCTCCCGTTTGCTGGTTGATCCAGGATCACAGGTTGGAAGCCCTCAAACTGCTTCAGCACCTTGCTCTGCACAAGCAAACTCACCTGCCCCTACAGTTCAAACATCTTTTGCTTCAAGTCCAATCAAAGTTGACTGGAATGGACAAACATTATCTACAGAATTTGAGGATGTGGATTCTCGGGGTGATGCTGGAGCTTCATCTCTTGCTCAACCTATACCGGGTTCTGTTTTGAACAATGCTTGTCTACAGTTACCAGAAGTTGGAAGACTTTCTGAGTCATTCAGGAATCCTTCTGGTACATGGTATGCCGGACCTAAAGATTATCAAAGTGCTGGTTCATCTGACTGGGCGATGAACAGATCAACAAGAGAGTCCAGCCTGCATGACCAAAATCTTTTTGTTGAAGACATAAAGAAAAATTTCTTTGAAGAACTTAATGGATCGGACTCCATAACTCATAAGCTAACAGACGCTAGACTGGATAGTAATAGGAAAGGCAAAGATGTAACTTGTGAAGATAGGTTGACCAATGACATAGATGTGCAGGCTGTCACAACCCCTTCCCAGAGAGAAGCACAGTTTCAGGGCCATTCTGATCCTCACACAGTAGCTTTTTCTACTGCCCAAGTTGAGAAGAGTTCTGGAGATGGTGGTGTGCGTAGAGGTGAACCAGTAGAACTGAAAAAACTAGACAGCTTTGGTAGATGGATGGATAAAGAAATTGGTGTGGATTGTGATGATTCGTTGATGGCTTCAGACTCTGGAAATTATTGGAATACACTTGAGGCTGAGAATGGTGATAGGGAAGTTTCCAGTTTATCAGGCCATATGCAGCTAGATGTTGATTCACTTGGCCCTTCTCTTTCCCAGGAACAACTATTTAGTATATGTGATTTTTCTCCAGATTGGTCTTATTCAGGAACTGAAACAAAGGTTTTAATAGTTGGAAGATTTTTAGGAGGCAAGAAGAATTTTACTGAGACCAAGTGGGGATGCATGTTTGGTGAAATAGAGGTTCCTGCTGAAGTTCTGACTGATAATGTTATTCGATGTCAAACTCCTTTACATGCTCCTGGGTGTGTTCCATTCTATGTGACTTGCAGAAATAGGTTGGCCTGCAGTGAGGTGAGGGAGTTTGAATATAGAGAAAAACCTATCGGGATATCTCTAAACAGCTCTAGAGAAGATGAGTTGCGCTTTCAGATTCGTCTTGCAAAATTGTTGAACTTGGGATCAGAGAGGAAGTGGTTGGAATGTTCTGCTTTGGATTGTGATAAATGTAAGCTCAAAAGTTCCATAGGTTCAATAAGAAGCAACAGCGGGAGTGATTGGATGATAGCTTATGGAGATTCTATGGCATGCAAACGTGGTCAGTTGACCCACATAGATGTATTGATTCAGAATTTGTTGAAGGATAGACTTTTTGAATGGCTGGTATATAAAGTTCATGAAGAAGGTAAAGGACCACATGTTTTAGATAATGAAGGCCAAGGCGTTCTACATTTGGCAGCTGCTCTTGGTTATGAATGGGCGATGGGTCTCATAGTTGCTGCTGGTGTCAGTCCTAATTTCAGAGATGCCCGTGGAAGAACGGGACTTCACTGGGCATCATATTTTGGAAGAGAGGAAACAGTGATCACATTACTTGGATTGGGTGCTGCTCCAGGTGCTGTTGATGACCCAACGCCAGCATTTCCTGGAGGACAAACAGCCGCTGATCTAGCCTCAAGTAGAGGCCACAAAGGGATTGCTGGATATTTGGCAGAAGCTGATCTAACCAGTCATCTGTCATTGTTGACCGTCAATGAGAAAACAATGGATAATGTTTCCGCAACTATTGCAGCTGAAAAGGCTATCAAGATTTCAGAAGCTATAACATCTGATGTGACAGTAGATGATGAAAATTCTCTGAAAGGTTCTCTAGCAGCAGTTAGGAAATCAGCCCATGCAGCTGCTCTGATTCAAGCAACTTTCCGTGCTCGTTCATTCCGCCAGAGACAATTAACTCAGAGCAGCATTGATATTCCTGAAGCTTCTATTGACCTAGTTGCACTTGGTTCCTTGAAGAGAGTTCAAAAGTTCAGTCACTATGAAGATTATCTCCATTCTGCAGCAGCTCTGAAGATACAAAGAAAATATCGTGGTTGGAAGGGGAGAAAGGAATTTTTGAAGATACGTAACCGTATTGTCAAACTTCAGGCTCATGTGAGGGGACATCAGGTTCGTAAGAATTACAAAAAGCTTGTTTGGTCTGTTGGTATAATGGAGAAAGTAATATTGCGTTGGAGGCGGAAACGGCCTGGTTTGCGAGGATTTCGGGTGGAAAAGGCTATTGAAGATGTATCTTCAGAGAATAAAAGAAATGATGACTATGAATTTTTGAGTGTTGGGAGGAAGCAGAAATTTGCTGGAGTTGAGAAAGCTCTTGCAAGGGTACAGTCCATGTCTCGTCACCCTGAAGCACGTGAACAGTATATGAGGTTACAGTCAAAGTTTGAGAAGCTTAAGATGGCTGATGGGAGTGGTGCCCCAAATAAAATTGAAGGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 CG-1 IQ TIG

Protein Analysis

992

Amino Acids

110.87

Weight (kDa)

8.54

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 22 - 133 1.7e-49 CG-1 domain
Ank_2 PF12796 616 - 697 2.7e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 642 - 734 5.3e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 517
Acc16I TGCGCA 1 cut(s) 110
Acc36I ACCTGC 1 cut(s) 517
AccB1I GGYRCC 1 cut(s) 2951
AccB7I CCANNNNNTGG 1 cut(s) 686
AccI GTMKAC 2 cut(s) 288, 670
AciI CCGC 7 cut(s) 220, 340, 1746, 2139, 2256, 2416, 2716
AclI AACGTT 1 cut(s) 73
AclWI GGATC 6 cut(s) 134, 437, 457, 874, 1016, 1666
AcoI YGGCCR 1 cut(s) 83
AcuI CTGAAG 8 cut(s) 462, 1164, 1470, 2475, 2567, 2606, 2757, 2904
AcvI CACGTG 1 cut(s) 2891
AfaI GTAC 2 cut(s) 724, 2862
AfiI CCNNNNNNNGG 5 cut(s) 161, 319, 436, 644, 686
AflII CTTAAG 1 cut(s) 2930
AflIII ACRYGT 1 cut(s) 1894
AjnI CCWGG 6 cut(s) 445, 1293, 1498, 2089, 2122, 2725
AloI GAACNNNNNNTCC 2 cut(s) 2631, 2663
Alw21I GWGCWC 1 cut(s) 2407
Alw26I GTCTC 5 cut(s) 430, 1400, 1970, 2416, 2877
AlwI GGATC 6 cut(s) 134, 437, 457, 874, 1016, 1666
AlwNI CAGNNNCTG 5 cut(s) 1187, 1349, 2096, 2141, 2195
Ama87I CYCGRG 1 cut(s) 603
AoxI GGCC 9 cut(s) 83, 152, 1012, 1249, 1279, 1539, 1912, 2161, 2723
ArsI GACNNNNNNTTYG 4 cut(s) 2494, 2526, 2631, 2663
Asp700I GAANNNNTTC 2 cut(s) 694, 845
AspLEI GCGC 3 cut(s) 111, 262, 1623
AspS9I GGNCC 4 cut(s) 737, 1012, 1280, 1889
AsuC2I CCSGG 1 cut(s) 645
AsuHPI GGTGA 8 cut(s) 209, 498, 620, 1103, 1235, 1442, 1564, 2870
AvaI CYCGRG 1 cut(s) 603
AvaII GGWCC 2 cut(s) 737, 1889
BaeGI GKGCMC 1 cut(s) 2956
BanI GGYRCC 1 cut(s) 2951
BarI GAAGNNNNNNTAC 2 cut(s) 279, 311
BbrPI CACGTG 1 cut(s) 2891
BbsI GAAGAC 2 cut(s) 697, 837
Bbv12I GWGCWC 1 cut(s) 2407
BccI CCATC 9 cut(s) 206, 233, 1067, 1125, 1129, 1168, 1954, 2929, 2936
BceAI ACGGC 1 cut(s) 2738
BciT130I CCWGG 6 cut(s) 447, 1295, 1500, 2091, 2124, 2727
BclI TGATCA 1 cut(s) 2061
BcnI CCSGG 1 cut(s) 645
BcoDI GTCTC 5 cut(s) 430, 1400, 1970, 2416, 2877
BfaI CTAG 8 cut(s) 38, 900, 1115, 1262, 1605, 2147, 2348, 2471
BfmI CTRYAG 5 cut(s) 516, 579, 671, 1543, 2535
BfrI CTTAAG 1 cut(s) 2930
BfuAI ACCTGC 1 cut(s) 517
Bme1390I CCNGG 7 cut(s) 447, 645, 1295, 1500, 2091, 2124, 2727
Bme18I GGWCC 2 cut(s) 737, 1889
BmeT110I CYCGRG 1 cut(s) 603
BmgT120I GGNCC 4 cut(s) 737, 1012, 1280, 1889
BmiI GGNNCC 4 cut(s) 80, 1443, 2485, 2953
BmrFI CCNGG 7 cut(s) 447, 645, 1295, 1500, 2091, 2124, 2727
BmrI ACTGGG 2 cut(s) 781, 2038
BmsI GCATC 5 cut(s) 345, 601, 1409, 1993, 2042
BmuI ACTGGG 2 cut(s) 781, 2038
BpiI GAAGAC 2 cut(s) 697, 837
BpmI CTGGAG 8 cut(s) 141, 244, 636, 1089, 1311, 2073, 2145, 2856
BpuEI CTTGAG 2 cut(s) 1229, 2137
BpuMI CCSGG 1 cut(s) 645
BsaAI YACGTR 2 cut(s) 2603, 2891
BsaI GGTCTC 2 cut(s) 1400, 1970
BsaJI CCNNGG 5 cut(s) 313, 1293, 1499, 1915, 2008
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 5 cut(s) 161, 319, 436, 644, 686
Bse1I ACTGG 7 cut(s) 563, 776, 909, 1097, 1239, 2033, 2205
BseBI CCWGG 6 cut(s) 447, 1295, 1500, 2091, 2124, 2727
BseDI CCNNGG 5 cut(s) 313, 1293, 1499, 1915, 2008
BseGI GGATG 7 cut(s) 21, 244, 360, 598, 1140, 1424, 1764
BseLI CCNNNNNNNGG 5 cut(s) 161, 319, 436, 644, 686
BseMII CTCAG 4 cut(s) 690, 1206, 1395, 2447
BseNI ACTGG 7 cut(s) 563, 776, 909, 1097, 1239, 2033, 2205
BseRI GAGGAG 1 cut(s) 358
BseSI GKGCMC 1 cut(s) 2956
BseX3I CGGCCG 1 cut(s) 83
BsgI GTGCAG 2 cut(s) 477, 989
Bsh1285I CGRYCG 1 cut(s) 86
BshFI GGCC 9 cut(s) 85, 154, 1014, 1251, 1281, 1541, 1914, 2163, 2725
BshNI GGYRCC 1 cut(s) 2951
BsiEI CGRYCG 1 cut(s) 86
BsiHKAI GWGCWC 1 cut(s) 2407
BsiHKCI CYCGRG 1 cut(s) 603
BsiSI CCGG 3 cut(s) 82, 644, 735
BslFI GGGAC 2 cut(s) 2034, 2652
BslI CCNNNNNNNGG 5 cut(s) 161, 319, 436, 644, 686
BsmAI GTCTC 5 cut(s) 430, 1400, 1970, 2416, 2877
BsmFI GGGAC 2 cut(s) 2034, 2652
BsnI GGCC 9 cut(s) 85, 154, 1014, 1251, 1281, 1541, 1914, 2163, 2725
Bso31I GGTCTC 2 cut(s) 1400, 1970
BsoBI CYCGRG 1 cut(s) 603
Bsp1286I GDGCHC 2 cut(s) 2407, 2956
Bsp19I CCATGG 1 cut(s) 313
BspACI CCGC 7 cut(s) 220, 340, 1746, 2139, 2256, 2416, 2716
BspANI GGCC 9 cut(s) 85, 154, 1014, 1251, 1281, 1541, 1914, 2163, 2725
BspCNI CTCAG 4 cut(s) 691, 1207, 1396, 2446
BspHI TCATGA 1 cut(s) 1873
BspLI GGNNCC 4 cut(s) 80, 1443, 2485, 2953
BspMAI CTGCAG 2 cut(s) 1547, 2539
BspMI ACCTGC 1 cut(s) 517
BspPI GGATC 6 cut(s) 134, 437, 457, 874, 1016, 1666
BspT107I GGYRCC 1 cut(s) 2951
BspTI CTTAAG 1 cut(s) 2930
BspTNI GGTCTC 2 cut(s) 1400, 1970
BsrI ACTGG 7 cut(s) 563, 776, 909, 1097, 1239, 2033, 2205
BssECI CCNNGG 5 cut(s) 313, 1293, 1499, 1915, 2008
BssT1I CCWWGG 2 cut(s) 313, 1915
Bst2UI CCWGG 6 cut(s) 447, 1295, 1500, 2091, 2124, 2727
Bst6I CTCTTC 3 cut(s) 1055, 2041, 2486
BstAFI CTTAAG 1 cut(s) 2930
BstAPI GCANNNNNTGC 1 cut(s) 2264
BstBAI YACGTR 2 cut(s) 2603, 2891
BstC8I GCNNGC 5 cut(s) 806, 972, 1543, 1786, 2115
BstDEI CTNAG 5 cut(s) 6, 699, 1215, 1404, 2433
BstDSI CCRYGG 2 cut(s) 313, 2008
BstEII GGTNACC 1 cut(s) 215
BstF5I GGATG 7 cut(s) 21, 244, 360, 598, 1140, 1424, 1764
BstHHI GCGC 3 cut(s) 111, 262, 1623
BstMAI GTCTC 5 cut(s) 430, 1400, 1970, 2416, 2877
BstMCI CGRYCG 1 cut(s) 86
BstMWI GCNNNNNNNGC 9 cut(s) 76, 2093, 2147, 2264, 2276, 2375, 2713, 2722, 2731
BstNI CCWGG 6 cut(s) 447, 1295, 1500, 2091, 2124, 2727
BstNSI RCATGY 4 cut(s) 1426, 1496, 1788, 1898
BstPI GGTNACC 1 cut(s) 215
BstSCI CCNGG 7 cut(s) 445, 643, 1293, 1498, 2089, 2122, 2725
BstSFI CTRYAG 5 cut(s) 516, 579, 671, 1543, 2535
BstSLI GKGCMC 1 cut(s) 2956
BstSNI TACGTA 1 cut(s) 2603
BstV2I GAAGAC 2 cut(s) 697, 837
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BstZI CGGCCG 1 cut(s) 83
BsuRI GGCC 9 cut(s) 85, 154, 1014, 1251, 1281, 1541, 1914, 2163, 2725
BtgI CCRYGG 2 cut(s) 313, 2008
BtgZI GCGATG 2 cut(s) 791, 1973
BtsCI GGATG 7 cut(s) 21, 244, 360, 598, 1140, 1424, 1764
BtsI GCAGTG 1 cut(s) 1552
BtsIMutI CAGTG 4 cut(s) 298, 1552, 2026, 2064
BveI ACCTGC 1 cut(s) 517
Cac8I GCNNGC 5 cut(s) 806, 972, 1543, 1786, 2115
CaiI CAGNNNCTG 5 cut(s) 1187, 1349, 2096, 2141, 2195
CciI TCATGA 1 cut(s) 1873
CfoI GCGC 3 cut(s) 111, 262, 1623
Cfr13I GGNCC 4 cut(s) 737, 1012, 1280, 1889
CseI GACGC 1 cut(s) 905
Csp6I GTAC 2 cut(s) 723, 2861
CviQI GTAC 2 cut(s) 723, 2861
DdeI CTNAG 5 cut(s) 6, 699, 1215, 1404, 2433
EaeI YGGCCR 1 cut(s) 83
EagI CGGCCG 1 cut(s) 83
Eam1104I CTCTTC 3 cut(s) 1055, 2041, 2486
EarI CTCTTC 3 cut(s) 1055, 2041, 2486
EciI GGCGGA 2 cut(s) 2405, 2731
EclXI CGGCCG 1 cut(s) 83
Eco105I TACGTA 1 cut(s) 2603
Eco130I CCWWGG 2 cut(s) 313, 1915
Eco147I AGGCCT 1 cut(s) 154
Eco31I GGTCTC 2 cut(s) 1400, 1970
Eco32I GATATC 1 cut(s) 1590
Eco47I GGWCC 2 cut(s) 737, 1889
Eco52I CGGCCG 1 cut(s) 83
Eco57I CTGAAG 8 cut(s) 462, 1164, 1470, 2475, 2567, 2606, 2757, 2904
Eco72I CACGTG 1 cut(s) 2891
Eco88I CYCGRG 1 cut(s) 603
Eco91I GGTNACC 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 215
EcoRII CCWGG 6 cut(s) 445, 1293, 1498, 2089, 2122, 2725
EcoRV GATATC 1 cut(s) 1590
EcoT14I CCWWGG 2 cut(s) 313, 1915
EcoT22I ATGCAT 1 cut(s) 1424
ErhI CCWWGG 2 cut(s) 313, 1915
FaqI GGGAC 2 cut(s) 2034, 2652
FauI CCCGC 1 cut(s) 1739
FauNDI CATATG 1 cut(s) 1254
FbaI TGATCA 1 cut(s) 2061
FblI GTMKAC 2 cut(s) 288, 670
FokI GGATG 7 cut(s) 8, 251, 367, 605, 1147, 1431, 1771
FspBI CTAG 8 cut(s) 38, 900, 1115, 1262, 1605, 2147, 2348, 2471
FspI TGCGCA 1 cut(s) 110
GlaI GCGC 3 cut(s) 110, 261, 1622
GsuI CTGGAG 8 cut(s) 141, 244, 636, 1089, 1311, 2073, 2145, 2856
HaeIII GGCC 9 cut(s) 85, 154, 1014, 1251, 1281, 1541, 1914, 2163, 2725
HapII CCGG 3 cut(s) 82, 644, 735
HgaI GACGC 1 cut(s) 905
HhaI GCGC 3 cut(s) 111, 262, 1623
Hin6I GCGC 3 cut(s) 109, 260, 1621
HinP1I GCGC 3 cut(s) 109, 260, 1621
HincII GTYRAC 5 cut(s) 132, 556, 951, 1803, 2223
HindII GTYRAC 5 cut(s) 132, 556, 951, 1803, 2223
HindIII AAGCTT 3 cut(s) 2457, 2666, 2927
HpaI GTTAAC 1 cut(s) 132
HpaII CCGG 3 cut(s) 82, 644, 735
HphI GGTGA 8 cut(s) 209, 498, 620, 1103, 1235, 1442, 1564, 2870
Hpy166II GTNNAC 9 cut(s) 132, 289, 556, 671, 951, 1094, 1803, 2223, 2894
Hpy8I GTNNAC 9 cut(s) 132, 289, 556, 671, 951, 1094, 1803, 2223, 2894
HpyAV CCTTC 9 cut(s) 268, 726, 996, 1293, 1831, 1874, 1904, 2569, 2963
HpyCH4IV ACGT 5 cut(s) 73, 291, 1792, 2602, 2890
HpyF10VI GCNNNNNNNGC 9 cut(s) 76, 2093, 2147, 2264, 2276, 2375, 2713, 2722, 2731
HpyF3I CTNAG 5 cut(s) 6, 699, 1215, 1404, 2433
HpySE526I ACGT 5 cut(s) 73, 291, 1792, 2602, 2890
HspAI GCGC 3 cut(s) 109, 260, 1621
Ksp22I TGATCA 1 cut(s) 2061
KspAI GTTAAC 1 cut(s) 132
LmnI GCTCC 5 cut(s) 84, 411, 617, 1501, 2092
LweI GCATC 5 cut(s) 345, 601, 1409, 1993, 2042
MaeI CTAG 8 cut(s) 38, 900, 1115, 1262, 1605, 2147, 2348, 2471
MaeII ACGT 5 cut(s) 73, 291, 1792, 2602, 2890
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 2407, 2956
MlyI GAGTC 4 cut(s) 710, 806, 866, 1178
MmeI TCCRAC 6 cut(s) 439, 667, 1351, 1656, 2552, 2690
Mph1103I ATGCAT 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 694, 845
MseI TTAA 5 cut(s) 131, 861, 1364, 2429, 2931
MslI CAYNNNNRTG 2 cut(s) 965, 1812
MspA1I CMGCKG 8 cut(s) 161, 222, 340, 1746, 1937, 2141, 2270, 2378
MspCI CTTAAG 1 cut(s) 2930
MspI CCGG 3 cut(s) 82, 644, 735
MspR9I CCNGG 7 cut(s) 447, 645, 1295, 1500, 2091, 2124, 2727
MvaI CCWGG 6 cut(s) 447, 1295, 1500, 2091, 2124, 2727
MwoI GCNNNNNNNGC 9 cut(s) 76, 2093, 2147, 2264, 2276, 2375, 2713, 2722, 2731
NciI CCSGG 1 cut(s) 645
NcoI CCATGG 1 cut(s) 313
NdeI CATATG 1 cut(s) 1254
NlaIV GGNNCC 4 cut(s) 80, 1443, 2485, 2953
NmuCI GTSAC 6 cut(s) 215, 976, 1519, 2311, 2510, 2876
NsbI TGCGCA 1 cut(s) 110
NsiI ATGCAT 1 cut(s) 1424
NspI RCATGY 4 cut(s) 1426, 1496, 1788, 1898
PaeI GCATGC 1 cut(s) 1788
PagI TCATGA 1 cut(s) 1873
PaqCI CACCTGC 1 cut(s) 517
PceI AGGCCT 1 cut(s) 154
PciI ACATGT 1 cut(s) 1894
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PdmI GAANNNNTTC 2 cut(s) 694, 845
PfeI GAWTC 9 cut(s) 62, 599, 712, 1166, 1271, 1630, 1775, 1822, 2386
PflFI GACNNNGTC 1 cut(s) 44
PflMI CCANNNNNTGG 1 cut(s) 686
PfoI TCCNGGA 2 cut(s) 445, 2122
PleI GAGTC 4 cut(s) 709, 805, 866, 1178
PmaCI CACGTG 1 cut(s) 2891
PmlI CACGTG 1 cut(s) 2891
PpsI GAGTC 4 cut(s) 709, 805, 866, 1178
Ppu21I YACGTR 2 cut(s) 2603, 2891
PscI ACATGT 1 cut(s) 1894
Psp1406I AACGTT 1 cut(s) 73
Psp6I CCWGG 6 cut(s) 445, 1293, 1498, 2089, 2122, 2725
PspCI CACGTG 1 cut(s) 2891
PspEI GGTNACC 1 cut(s) 215
PspGI CCWGG 6 cut(s) 445, 1293, 1498, 2089, 2122, 2725
PspN4I GGNNCC 4 cut(s) 80, 1443, 2485, 2953
PspPI GGNCC 4 cut(s) 737, 1012, 1280, 1889
PsrI GAACNNNNNNTAC 2 cut(s) 1854, 1886
PstI CTGCAG 2 cut(s) 1547, 2539
PstNI CAGNNNCTG 5 cut(s) 1187, 1349, 2096, 2141, 2195
PsuI RGATCY 1 cut(s) 139
PsyI GACNNNGTC 1 cut(s) 44
PvuII CAGCTG 4 cut(s) 161, 1937, 2270, 2378
RsaI GTAC 2 cut(s) 724, 2862
RsaNI GTAC 2 cut(s) 723, 2861
RseI CAYNNNNRTG 2 cut(s) 965, 1812
SaqAI TTAA 5 cut(s) 131, 861, 1364, 2429, 2931
Sau96I GGNCC 4 cut(s) 737, 1012, 1280, 1889
SchI GAGTC 4 cut(s) 710, 806, 866, 1178
ScrFI CCNGG 7 cut(s) 447, 645, 1295, 1500, 2091, 2124, 2727
SduI GDGCHC 2 cut(s) 2407, 2956
SfaNI GCATC 5 cut(s) 345, 601, 1409, 1993, 2042
SfcI CTRYAG 5 cut(s) 516, 579, 671, 1543, 2535
SinI GGWCC 2 cut(s) 737, 1889
SmiMI CAYNNNNRTG 2 cut(s) 965, 1812
SmlI CTYRAG 3 cut(s) 1208, 2152, 2930
SmoI CTYRAG 3 cut(s) 1208, 2152, 2930
SnaBI TACGTA 1 cut(s) 2603
SphI GCATGC 1 cut(s) 1788
SseBI AGGCCT 1 cut(s) 154
SsiI CCGC 7 cut(s) 220, 340, 1746, 2139, 2256, 2416, 2716
SspI AATATT 1 cut(s) 2703
SspMI CTAG 8 cut(s) 38, 900, 1115, 1262, 1605, 2147, 2348, 2471
StuI AGGCCT 1 cut(s) 154
StyD4I CCNGG 7 cut(s) 445, 643, 1293, 1498, 2089, 2122, 2725
StyI CCWWGG 2 cut(s) 313, 1915
TaiI ACGT 5 cut(s) 76, 294, 1795, 2605, 2893
TaqI TCGA 1 cut(s) 1474
TauI GCSGC 1 cut(s) 2141
TfiI GAWTC 9 cut(s) 62, 599, 712, 1166, 1271, 1630, 1775, 1822, 2386
Tru1I TTAA 5 cut(s) 131, 861, 1364, 2429, 2931
Tru9I TTAA 5 cut(s) 131, 861, 1364, 2429, 2931
TscAI CASTG 4 cut(s) 305, 1552, 2033, 2064
TseFI GTSAC 6 cut(s) 215, 976, 1519, 2311, 2510, 2876
Tsp45I GTSAC 6 cut(s) 215, 976, 1519, 2311, 2510, 2876
TspGWI ACGGA 1 cut(s) 2390
TspRI CASTG 4 cut(s) 305, 1552, 2033, 2064
Tth111I GACNNNGTC 1 cut(s) 44
Van91I CCANNNNNTGG 1 cut(s) 686
Vha464I CTTAAG 1 cut(s) 2930
VpaK11BI GGWCC 2 cut(s) 737, 1889
XbaI TCTAGA 1 cut(s) 1604
XceI RCATGY 4 cut(s) 1426, 1496, 1788, 1898
XmiI GTMKAC 2 cut(s) 288, 670
XmnI GAANNNNTTC 2 cut(s) 694, 845
XspI CTAG 8 cut(s) 38, 900, 1115, 1262, 1605, 2147, 2348, 2471
Zsp2I ATGCAT 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.