Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001204

Physical Location & Seq

Genomic Coordinates Reverse (-)

8493098 .. 8503751

Gene Structure 10654 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G060300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3261 bp

ATGGCGGAACGCGTATCGTACTCTCAGGGCCCTCGATTAGACTTTCAACAATTGCTGGGGGAGGCCCAACATCGGTGGTTGCGGCCAGCTGAAATCTGTGAAATTCTTAGTAATTTTCAGAAATTCCATATTTCATCAGAGCCTCCAAACAGACCACCAAGTGGTTCGCTGTTTCTTTTTGATCGGAAGGTTTTGAGATACTTTAGAAAGGATGGACATAATTGGAGGAAGAAAAAAGATGGAAAGACTGTGAAGGAGGCTCATGAGAAGCTAAAGGTTGGCAGTGTTGATGTTCTACACTGCTACTATGCTCATGGAGAAGAGAACGAAAATTTTCAAAGGCGCAGCTATTGGATGCTTGAACAGGATTTGATGCACATAGTTTTTGTCCATTACTTGGAAGTAAAGGGTAATAGGGCAAATGCTGGAGGCATTAGAGAGATTGATGAGGTTACACCTGATCTGCAAAAGGGCAGCTCCTGGACTTCTAGCCCTTCTAATAGTAATTGTAGAACACCTTCAGGAAATACAGATTATACAAGCCCAAGCAGCAACCTCACATCATGTGAAGATGCTGATTCTGGTGATAGTCACCAAGCAAGTTCTTTTCACTCAAGTTTCGACTCACAACAGATGGGGAATGGTCCTCTCACAGACAAAGCAGATATTAATCTCTCACTGCATCCGCATTTGAACAATCATGATGGCCAGTCATCATTTCATGGAGGAAATTACAGGCCATATTTTGAGAGAGATCAACAGTGTTACACTGATGACTCTACTTGTGGGATTGATTCTCAAAAAACACTCGGTGTGGGATCCTGGGAAGAAATCTTGGAACAGTGCACAACGGGACTTCATACTGTAACTTCTCATGGATCAAAGTCTTCCATCCAAATTGCTTCTTCTGGAATTCCCCCTGAACAACAAAATATAACTTCAACTGAGTTTTTAGCAGGGAATAGCACATTAAAGGAGGAGTTCGGAAGTCCTCTGGCATTCCGAACAAATTGGCAGATTCCTTTGGAAGAAAATGCATTGCAGTTGCCCAAATGGTCCCTTGACCAGTCAATGAATTTGCAACTGCCAAGTAATCTTGATACCAGGTTATTTGAGCAAGGCACTGTTGATGTGAATCTGAGAAATGCTCCTGAGCTTGTCACTACTCATCCCAATCAGCGAAATGACCAGCTTGTGCAGAACAACTTTCAAGCGCAGCTTACAAATGCAGAATCTCAATGCTTAATCATATCAAGTTCCGAGCCTGACATTCCTAAAGATGGGAATATCAACTATGCTTTCACTTTGAGACAGCAATTATTAGATCAAGAAGAGGGTTTGAAGAAAGTTGACAGCTTCTCTAGGTGGGTTTCTAAGGAACTCGGAGAGGTTGATGATTTGCAGATGCAATCCTCATCTGGTATTTCGTGGAGCACAGATGAATGTGGAAATGTAGCTGATGATTCCTCATTGAGCCCTTCTATCTCCCAGGACCAGCTTTTCAGTATAGTTGATTTTTCACCAAAATGGGCGTACACTGACTCTGAAATTGAGGTTCTGGTTATTGGGACATTCTTGGTAAGTCAAAAACAGGTAATAAAGTATAATTGGTCTTGTATGTTTGGGGAAGTGGAGGTTCCAGCACAGGTTTTAGCCAATGGAGTTCTTTTTTGTTTTGCTCCACCTCACAGTGCTGGGCAAGTCCCTTTCTATGTAACCTGTTCCAACAGGTTAGCTTGTAGTGAAGTAAGGGAGTTTGATTATCAAGTGGGCTCCACTAAAGATTTAGATATCACAAATATCTGCAATGGCACTACAAATGAAATCCATCTTCACTTGCGTCTTGAGAGGTTACTGTCTCTGAGATCTGTCAGCCCTTCAGGTCAACTAGTTGAGGGTGTTAAGGAGAAACAAAACTTAATTAGTAAAATCATTTCACTGAAGGAGGAAGAGGAATACTTACCCCTGGTAGAGCCAACAGCAGTGAATGATTTGCCCCAACATGAAGGGATGGAACATCTCATAAAGCTGATGAAAGAGAAGTTGTACACGTGGCTCCTTCATAAAGCACTAGAAGATGGTAAAGGACCTAGTGTATTAGATAGTGAGGGCCAAGGCGTGATACATTTAGCAGCTGCTCTTGGATATGATTGGGCCATAAAACCCATTGTAACTGCAGGAGTTAGTATCAATTTTCGCGACGTTAATGGATGGACTGCCCTTCATTGGGCTGCATTCTATGGCAGAGAGCAGACGGTTGCAATCCTTATCTCTCTTGGTGCAGCTCCTGGAGCGCTGACCGATCCGTCTCCAGAATTTCCTTTGGGTAGAGCACCAGCAGACCTGGCTTCTGTTAACAGGCACAAAGGAATCTCAGGCTTCCTCGCAGAGTCTTCGCTGACCAGTTACCTTGACTCCCTTACAATGAATGATGCAAAGGAAGGTGGTGCTGCAGAAATATCTGGAATAAGAGCAGTTAAAACTTTTTCAGAACGAATAGCCACACCTGGGAGCTACAGTGATATGCCAGATGCGCTTTCACTGAAGGATTCACTTACTGCTGTAACTAATGCTACACAAGCTGCTGATCGCATACATCAAATGTTCAGGATGCAGTCATTTGATAGGAGACAGTTAACTGAGTATGATACTGATGAGTTCGGAATGCCGGATGAGCGAGCGATTTCACTCATAGCTTCCAAATCACACAAGGTGGGACAAGCCAATGGGCATACTGCTGCAATTCAGATACAGAAGAAGTTTCGTGGTTGGAAGAAGAGAAAAGAGTTCCTGATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTACGGGGACACCAAGTAAGGAAACAATATAAAGCAATCACCTGGTCAGTTGGAATTCTGGAGAAAGTTATATTGCGTTGGAGACGTAAGGGGACTGGTTTGCGAGGATTCCGACCGGATGCAGTTGCCAAGGCTCCGAACCCGCAAAGTGTGCCCCCAAAAGACGACGATTATGATTTTCTTAAGAAAGGAAGGAAACAAACTGAGGAAAGGTTACAAAAAGCGCTTACTAGGGTAAAGTCTATGGTTCAATATCCCGAGGGACGAGCTCAATATCGTAGACTGCTAAATGTTGTGGAAGGGTTCCGCGAAACCAAGGTAAGTGATATGGCTATGGATGGATCAGAACTAAAGGTCGAAGGTGGTGATGATCTGATTGATATTGACAAATTGTTGGATGACGACACTTTCATGTCTATAGCATTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071275 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 CG-1 IQ TIG

Protein Analysis

1087

Amino Acids

121.55

Weight (kDa)

5.69

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09410 AT5G09410 AT5G09410 AT5G09410 AT5G64220 AT5G64220
fragaria_vesca	FvH4_5g27670 FvH4_5g27670 FvH4_5g27670 FvH4_5g27670
malus_domestica	MD05G1044600.v1.1 MD10G1051700.v1.1 MD12G1040100.v1.1 MD13G1144300.v1.1 MD16G1084000.v1.1 MD16G1139000.v1.1 MD16G1139200.v1.1
prunus_persica	Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.1G108700_v2.0.a1 Prupe.8G060300_v2.0.a1
pyrus_communis	pycom01g00940 pycom05g03720 pycom10g03650 pycom12g03420 pycom13g12490 pycom16g12350 pycom16g12360
rosa_chinensis	RchiOBHm_Chr2g0113081 RchiOBHm_Chr7g0219321
rosa_laevigata	RLG00000002297 RLG00000022767
rosa_multiflora	Rmu_sc0029995.1_g000002
rosa_roxburghii	Rroxscaffold_2G00129370 Rroxscaffold_3G00240090
rosa_rugosa	Rorug01G0154600.1 Rorug07G0184300
rosa_samantha	Rh2AG238800 Rh2AG238900 Rh2AG324900 Rh2BG252600 Rh2CG242800 Rh2CG242900 Rh2DG246800 Rh4BG352900 Rh5AG518400 Rh7AG327200 Rh7BG317200 Rh7CG344500 Rh7DG209600 Rh7DG322800
rosa_wichuraiana	Rw0G004510 Rw2G018730 Rw7G027570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2305
AccB7I	CCANNNNNTGG	2 cut(s)	161, 397
AccI	GTMKAC	1 cut(s)	3109
AccII	CGCG	3 cut(s)	12, 2199, 3138
AciI	CCGC	5 cut(s)	5, 82, 686, 2972, 3136
AclWI	GGATC	5 cut(s)	813, 826, 886, 2297, 3178
AcoI	YGGCCR	2 cut(s)	83, 706
AcsI	RAATTY	7 cut(s)	102, 122, 331, 912, 1075, 2315, 2883
AcuI	CTGAAG	4 cut(s)	504, 1863, 1961, 2564
AcvI	CACGTG	1 cut(s)	2052
AdeI	CACNNNGTG	3 cut(s)	161, 812, 2713
AfaI	GTAC	4 cut(s)	20, 1535, 2048, 2832
AfeI	AGCGCT	2 cut(s)	2295, 3054
AfiI	CCNNNNNNNGG	7 cut(s)	72, 161, 397, 1280, 2226, 2227, 2508
AflII	CTTAAG	1 cut(s)	3011
AflIII	ACRYGT	2 cut(s)	10, 2049
AgsI	TTSAA	8 cut(s)	47, 338, 362, 694, 942, 1211, 1342, 3080
AhlI	ACTAGT	1 cut(s)	1888
Alw21I	GWGCWC	4 cut(s)	848, 1436, 2335, 3100
Alw26I	GTCTC	5 cut(s)	1303, 1863, 2313, 2623, 2905
Alw44I	GTGCAC	1 cut(s)	844
AlwI	GGATC	5 cut(s)	813, 826, 886, 2297, 3178
AlwNI	CAGNNNCTG	2 cut(s)	480, 2288
Ama87I	CYCGRG	1 cut(s)	3086
Aor51HI	AGCGCT	2 cut(s)	2295, 3054
AoxI	GGCC	7 cut(s)	28, 63, 83, 706, 737, 2110, 2154
ApaI	GGGCCC	1 cut(s)	32
ApaLI	GTGCAC	1 cut(s)	844
ApoI	RAATTY	7 cut(s)	102, 122, 331, 912, 1075, 2315, 2883
AseI	ATTAAT	1 cut(s)	669
Asp700I	GAANNNNTTC	2 cut(s)	333, 517
AspLEI	GCGC	5 cut(s)	345, 1216, 2296, 2536, 3055
AspS9I	GGNCC	9 cut(s)	28, 29, 64, 644, 1056, 1492, 2087, 2110, 2154
AsuHPI	GGTGA	5 cut(s)	584, 596, 1512, 2860, 3206
AvaI	CYCGRG	1 cut(s)	3086
AvaII	GGWCC	4 cut(s)	644, 1056, 1492, 2087
BaeGI	GKGCMC	3 cut(s)	32, 848, 2985
BalI	TGGCCA	1 cut(s)	708
BamHI	GGATCC	1 cut(s)	818
BanII	GRGCYC	4 cut(s)	32, 1478, 1775, 3100
BarI	GAAGNNNNNNTAC	2 cut(s)	502, 534
BbrPI	CACGTG	1 cut(s)	2052
BbsI	GAAGAC	2 cut(s)	879, 2385
Bbv12I	GWGCWC	4 cut(s)	848, 1436, 2335, 3100
BcgI	CGANNNNNNTGC	2 cut(s)	2376, 2410
BcoDI	GTCTC	5 cut(s)	1303, 1863, 2313, 2623, 2905
BcuI	ACTAGT	1 cut(s)	1888
BfaI	CTAG	6 cut(s)	489, 1362, 1889, 2072, 2091, 3060
BfmI	CTRYAG	4 cut(s)	2175, 2451, 2515, 3246
BfoI	RGCGCY	2 cut(s)	2297, 3056
BfrI	CTTAAG	1 cut(s)	3011
BglII	AGATCT	1 cut(s)	1865
Bme18I	GGWCC	4 cut(s)	644, 1056, 1492, 2087
BmeT110I	CYCGRG	1 cut(s)	3086
BmgT120I	GGNCC	9 cut(s)	28, 29, 64, 644, 1056, 1492, 2087, 2110, 2154
BmiI	GGNNCC	8 cut(s)	30, 820, 1058, 1638, 1774, 2057, 2964, 3134
BmsI	GCATC	9 cut(s)	345, 363, 562, 691, 1395, 2422, 2521, 2601, 2938
BpiI	GAAGAC	2 cut(s)	879, 2385
BplI	GAGNNNNNCTC	2 cut(s)	1132, 1164
BpmI	CTGGAG	4 cut(s)	447, 2295, 2310, 2909
Bpu10I	CCTNAGC	1 cut(s)	1152
BpuEI	CTTGAG	2 cut(s)	598, 1865
BsaAI	YACGTR	1 cut(s)	2052
BsaBI	GATNNNNATC	2 cut(s)	669, 1134
BsaJI	CCNNGG	8 cut(s)	822, 1488, 1965, 2113, 2507, 2958, 3087, 3144
BsaWI	WCCGGW	1 cut(s)	2944
BsaXI	ACNNNNNCTCC	4 cut(s)	2399, 2429, 2503, 2533
Bsc4I	CCNNNNNNNGG	7 cut(s)	72, 161, 397, 1280, 2226, 2227, 2508
Bse1I	ACTGG	4 cut(s)	709, 1066, 2403, 2929
Bse3DI	GCAATG	2 cut(s)	1037, 1813
Bse8I	GATNNNNATC	2 cut(s)	669, 1134
BseDI	CCNNGG	8 cut(s)	822, 1488, 1965, 2113, 2507, 2958, 3087, 3144
BseJI	GATNNNNATC	2 cut(s)	669, 1134
BseLI	CCNNNNNNNGG	7 cut(s)	72, 161, 397, 1280, 2226, 2227, 2508
BseMI	GCAATG	2 cut(s)	1037, 1813
BseMII	CTCAG	8 cut(s)	38, 936, 1130, 1143, 1853, 2388, 2631, 3024
BseNI	ACTGG	4 cut(s)	709, 1066, 2403, 2929
BseRI	GAGGAG	1 cut(s)	992
BseSI	GKGCMC	3 cut(s)	32, 848, 2985
BseYI	CCCAGC	2 cut(s)	55, 1694
BsgI	GTGCAG	2 cut(s)	1217, 2301
Bsh1236I	CGCG	3 cut(s)	12, 2199, 3138
Bsh1285I	CGRYCG	1 cut(s)	2945
BshFI	GGCC	7 cut(s)	30, 65, 85, 708, 739, 2112, 2156
BsiEI	CGRYCG	1 cut(s)	2945
BsiHKAI	GWGCWC	4 cut(s)	848, 1436, 2335, 3100
BsiHKCI	CYCGRG	1 cut(s)	3086
BsiSI	CCGG	2 cut(s)	2669, 2945
BslFI	GGGAC	8 cut(s)	867, 1042, 1582, 1688, 2730, 2850, 2935, 3105
BslI	CCNNNNNNNGG	7 cut(s)	72, 161, 397, 1280, 2226, 2227, 2508
BsmAI	GTCTC	5 cut(s)	1303, 1863, 2313, 2623, 2905
BsmBI	CGTCTC	2 cut(s)	2313, 2905
BsmFI	GGGAC	8 cut(s)	867, 1042, 1582, 1688, 2730, 2850, 2935, 3105
BsmI	GAATGC	3 cut(s)	998, 2234, 2670
BsnI	GGCC	7 cut(s)	30, 65, 85, 708, 739, 2112, 2156
BsoBI	CYCGRG	1 cut(s)	3086
Bsp120I	GGGCCC	1 cut(s)	28
Bsp1286I	GDGCHC	8 cut(s)	32, 848, 1436, 1478, 1775, 2335, 2985, 3100
Bsp1407I	TGTACA	1 cut(s)	2046
Bsp68I	TCGCGA	1 cut(s)	2199
BspACI	CCGC	5 cut(s)	5, 82, 686, 2972, 3136
BspANI	GGCC	7 cut(s)	30, 65, 85, 708, 739, 2112, 2156
BspCNI	CTCAG	8 cut(s)	37, 937, 1131, 1144, 1854, 2387, 2632, 3025
BspFNI	CGCG	3 cut(s)	12, 2199, 3138
BspHI	TCATGA	2 cut(s)	262, 700
BspLI	GGNNCC	8 cut(s)	30, 820, 1058, 1638, 1774, 2057, 2964, 3134
BspMAI	CTGCAG	2 cut(s)	2179, 2455
BspPI	GGATC	5 cut(s)	813, 826, 886, 2297, 3178
BspTI	CTTAAG	1 cut(s)	3011
BsrDI	GCAATG	2 cut(s)	1037, 1813
BsrGI	TGTACA	1 cut(s)	2046
BsrI	ACTGG	4 cut(s)	709, 1066, 2403, 2929
BssECI	CCNNGG	8 cut(s)	822, 1488, 1965, 2113, 2507, 2958, 3087, 3144
BssT1I	CCWWGG	3 cut(s)	2113, 2958, 3144
Bst6I	CTCTTC	4 cut(s)	315, 1326, 1944, 2771
BstAFI	CTTAAG	1 cut(s)	3011
BstAPI	GCANNNNNTGC	1 cut(s)	2980
BstAUI	TGTACA	1 cut(s)	2046
BstBAI	YACGTR	1 cut(s)	2052
BstC8I	GCNNGC	2 cut(s)	87, 2679
BstFNI	CGCG	3 cut(s)	12, 2199, 3138
BstH2I	RGCGCY	2 cut(s)	2297, 3056
BstHHI	GCGC	5 cut(s)	345, 1216, 2296, 2536, 3055
BstMAI	GTCTC	5 cut(s)	1303, 1863, 2313, 2623, 2905
BstMCI	CGRYCG	1 cut(s)	2945
BstMWI	GCNNNNNNNGC	7 cut(s)	549, 2291, 2345, 2533, 2579, 2674, 2980
BstSFI	CTRYAG	4 cut(s)	2175, 2451, 2515, 3246
BstSLI	GKGCMC	3 cut(s)	32, 848, 2985
BstUI	CGCG	3 cut(s)	12, 2199, 3138
BstV2I	GAAGAC	2 cut(s)	879, 2385
BstX2I	RGATCY	2 cut(s)	818, 1865
BstYI	RGATCY	2 cut(s)	818, 1865
BsuRI	GGCC	7 cut(s)	30, 65, 85, 708, 739, 2112, 2156
BtsI	GCAGTG	4 cut(s)	289, 298, 677, 1989
BtuMI	TCGCGA	1 cut(s)	2199
Cac8I	GCNNGC	2 cut(s)	87, 2679
CaiI	CAGNNNCTG	2 cut(s)	480, 2288
CciI	TCATGA	2 cut(s)	262, 700
CfoI	GCGC	5 cut(s)	345, 1216, 2296, 2536, 3055
Cfr13I	GGNCC	9 cut(s)	28, 29, 64, 644, 1056, 1492, 2087, 2110, 2154
CseI	GACGC	1 cut(s)	1829
CsiI	ACCWGGT	2 cut(s)	1103, 2870
Csp6I	GTAC	4 cut(s)	19, 1534, 2047, 2831
CspCI	CAANNNNNGTGG	2 cut(s)	56, 91
CviAII	CATG	9 cut(s)	263, 314, 564, 701, 722, 875, 2003, 2828, 3241
CviQI	GTAC	4 cut(s)	19, 1534, 2047, 2831
DraIII	CACNNNGTG	3 cut(s)	161, 812, 2713
DrdI	GACNNNNNNGTC	1 cut(s)	2305
DseDI	GACNNNNNNGTC	1 cut(s)	2305
EaeI	YGGCCR	2 cut(s)	83, 706
Eam1104I	CTCTTC	4 cut(s)	315, 1326, 1944, 2771
EarI	CTCTTC	4 cut(s)	315, 1326, 1944, 2771
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	3098
Eco130I	CCWWGG	3 cut(s)	2113, 2958, 3144
Eco24I	GRGCYC	4 cut(s)	32, 1478, 1775, 3100
Eco32I	GATATC	1 cut(s)	1792
Eco47I	GGWCC	4 cut(s)	644, 1056, 1492, 2087
Eco47III	AGCGCT	2 cut(s)	2295, 3054
Eco53kI	GAGCTC	1 cut(s)	3098
Eco57I	CTGAAG	4 cut(s)	504, 1863, 1961, 2564
Eco72I	CACGTG	1 cut(s)	2052
Eco88I	CYCGRG	1 cut(s)	3086
EcoICRI	GAGCTC	1 cut(s)	3098
EcoO109I	RGGNCCY	3 cut(s)	28, 29, 2087
EcoRI	GAATTC	2 cut(s)	912, 2883
EcoRV	GATATC	1 cut(s)	1792
EcoT14I	CCWWGG	3 cut(s)	2113, 2958, 3144
EcoT22I	ATGCAT	1 cut(s)	1039
EcoT38I	GRGCYC	4 cut(s)	32, 1478, 1775, 3100
ErhI	CCWWGG	3 cut(s)	2113, 2958, 3144
Esp3I	CGTCTC	2 cut(s)	2313, 2905
FaeI	CATG	9 cut(s)	266, 317, 567, 704, 725, 878, 2006, 2831, 3244
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FaqI	GGGAC	8 cut(s)	867, 1042, 1582, 1688, 2730, 2850, 2935, 3105
FatI	CATG	9 cut(s)	262, 313, 563, 700, 721, 874, 2002, 2827, 3240
FauI	CCCGC	1 cut(s)	2979
FblI	GTMKAC	1 cut(s)	3109
FriOI	GRGCYC	4 cut(s)	32, 1478, 1775, 3100
FspBI	CTAG	6 cut(s)	489, 1362, 1889, 2072, 2091, 3060
GlaI	GCGC	5 cut(s)	344, 1215, 2295, 2535, 3054
GsaI	CCCAGC	2 cut(s)	59, 1698
GsuI	CTGGAG	4 cut(s)	447, 2295, 2310, 2909
HaeII	RGCGCY	2 cut(s)	2297, 3056
HaeIII	GGCC	7 cut(s)	30, 65, 85, 708, 739, 2112, 2156
HapII	CCGG	2 cut(s)	2669, 2945
HgaI	GACGC	1 cut(s)	1829
HhaI	GCGC	5 cut(s)	345, 1216, 2296, 2536, 3055
Hin1II	CATG	9 cut(s)	266, 317, 567, 704, 725, 878, 2006, 2831, 3244
Hin6I	GCGC	5 cut(s)	343, 1214, 2294, 2534, 3053
HinP1I	GCGC	5 cut(s)	343, 1214, 2294, 2534, 3053
HincII	GTYRAC	4 cut(s)	1351, 1886, 2356, 2637
HindII	GTYRAC	4 cut(s)	1351, 1886, 2356, 2637
HpaI	GTTAAC	2 cut(s)	2356, 2637
HpaII	CCGG	2 cut(s)	2669, 2945
HphI	GGTGA	5 cut(s)	584, 596, 1512, 2860, 3206
Hpy166II	GTNNAC	8 cut(s)	846, 1351, 1536, 1886, 2049, 2356, 2637, 3110
Hpy8I	GTNNAC	8 cut(s)	846, 1351, 1536, 1886, 2049, 2356, 2637, 3110
Hpy99I	CGWCG	2 cut(s)	2204, 2999
HpyCH4IV	ACGT	3 cut(s)	2051, 2202, 2914
HpyF10VI	GCNNNNNNNGC	7 cut(s)	549, 2291, 2345, 2533, 2579, 2674, 2980
HpySE526I	ACGT	3 cut(s)	2051, 2202, 2914
Hsp92II	CATG	9 cut(s)	266, 317, 567, 704, 725, 878, 2006, 2831, 3244
HspAI	GCGC	5 cut(s)	343, 1214, 2294, 2534, 3053
KspAI	GTTAAC	2 cut(s)	2356, 2637
LweI	GCATC	9 cut(s)	345, 363, 562, 691, 1395, 2422, 2521, 2601, 2938
MabI	ACCWGGT	2 cut(s)	1103, 2870
MaeI	CTAG	6 cut(s)	489, 1362, 1889, 2072, 2091, 3060
MaeII	ACGT	3 cut(s)	2051, 2202, 2914
MfeI	CAATTG	1 cut(s)	50
MflI	RGATCY	2 cut(s)	818, 1865
MhlI	GDGCHC	8 cut(s)	32, 848, 1436, 1478, 1775, 2335, 2985, 3100
MlsI	TGGCCA	1 cut(s)	708
MluI	ACGCGT	1 cut(s)	10
MluNI	TGGCCA	1 cut(s)	708
MlyI	GAGTC	5 cut(s)	617, 770, 1535, 2399, 2408
MmeI	TCCRAC	6 cut(s)	1749, 2750, 2860, 2888, 2965, 3204
Mox20I	TGGCCA	1 cut(s)	708
Mph1103I	ATGCAT	1 cut(s)	1039
MroXI	GAANNNNTTC	2 cut(s)	333, 517
MscI	TGGCCA	1 cut(s)	708
MslI	CAYNNNNRTG	2 cut(s)	1525, 3239
Msp20I	TGGCCA	1 cut(s)	708
MspA1I	CMGCKG	2 cut(s)	89, 2135
MspCI	CTTAAG	1 cut(s)	3011
MspI	CCGG	2 cut(s)	2669, 2945
MunI	CAATTG	1 cut(s)	50
Mva1269I	GAATGC	3 cut(s)	998, 2234, 2670
MvnI	CGCG	3 cut(s)	12, 2199, 3138
MwoI	GCNNNNNNNGC	7 cut(s)	549, 2291, 2345, 2533, 2579, 2674, 2980
NlaIII	CATG	9 cut(s)	266, 317, 567, 704, 725, 878, 2006, 2831, 3244
NlaIV	GGNNCC	8 cut(s)	30, 820, 1058, 1638, 1774, 2057, 2964, 3134
NmuCI	GTSAC	2 cut(s)	590, 1159
NruI	TCGCGA	1 cut(s)	2199
NsiI	ATGCAT	1 cut(s)	1039
PagI	TCATGA	2 cut(s)	262, 700
PctI	GAATGC	3 cut(s)	998, 2234, 2670
PdmI	GAANNNNTTC	2 cut(s)	333, 517
PfeI	GAWTC	9 cut(s)	578, 794, 1018, 1135, 1232, 1463, 2370, 2549, 2937
PflMI	CCANNNNNTGG	2 cut(s)	161, 397
PfoI	TCCNGGA	2 cut(s)	479, 2287
PleI	GAGTC	5 cut(s)	617, 770, 1535, 2398, 2408
PmaCI	CACGTG	1 cut(s)	2052
PmlI	CACGTG	1 cut(s)	2052
PpsI	GAGTC	5 cut(s)	617, 770, 1535, 2398, 2408
Ppu21I	YACGTR	1 cut(s)	2052
PpuMI	RGGWCCY	1 cut(s)	2087
PshBI	ATTAAT	1 cut(s)	669
Psp124BI	GAGCTC	1 cut(s)	3100
Psp5II	RGGWCCY	1 cut(s)	2087
PspCI	CACGTG	1 cut(s)	2052
PspFI	CCCAGC	2 cut(s)	55, 1694
PspN4I	GGNNCC	8 cut(s)	30, 820, 1058, 1638, 1774, 2057, 2964, 3134
PspOMI	GGGCCC	1 cut(s)	28
PspPI	GGNCC	9 cut(s)	28, 29, 64, 644, 1056, 1492, 2087, 2110, 2154
PspPPI	RGGWCCY	1 cut(s)	2087
PstI	CTGCAG	2 cut(s)	2179, 2455
PstNI	CAGNNNCTG	2 cut(s)	480, 2288
PsuI	RGATCY	2 cut(s)	818, 1865
PvuII	CAGCTG	2 cut(s)	89, 2135
RruI	TCGCGA	1 cut(s)	2199
RsaI	GTAC	4 cut(s)	20, 1535, 2048, 2832
RsaNI	GTAC	4 cut(s)	19, 1534, 2047, 2831
RseI	CAYNNNNRTG	2 cut(s)	1525, 3239
SacI	GAGCTC	1 cut(s)	3100
Sau96I	GGNCC	9 cut(s)	28, 29, 64, 644, 1056, 1492, 2087, 2110, 2154
SchI	GAGTC	5 cut(s)	617, 770, 1535, 2399, 2408
SduI	GDGCHC	8 cut(s)	32, 848, 1436, 1478, 1775, 2335, 2985, 3100
SexAI	ACCWGGT	2 cut(s)	1103, 2870
SfaNI	GCATC	9 cut(s)	345, 363, 562, 691, 1395, 2422, 2521, 2601, 2938
SfcI	CTRYAG	4 cut(s)	2175, 2451, 2515, 3246
SinI	GGWCC	4 cut(s)	644, 1056, 1492, 2087
SmiMI	CAYNNNNRTG	2 cut(s)	1525, 3239
SmlI	CTYRAG	3 cut(s)	613, 1844, 3011
SmoI	CTYRAG	3 cut(s)	613, 1844, 3011
SpeI	ACTAGT	1 cut(s)	1888
SsiI	CCGC	5 cut(s)	5, 82, 686, 2972, 3136
SspMI	CTAG	6 cut(s)	489, 1362, 1889, 2072, 2091, 3060
SstI	GAGCTC	1 cut(s)	3100
StyI	CCWWGG	3 cut(s)	2113, 2958, 3144
TaiI	ACGT	3 cut(s)	2054, 2205, 2917
TaqI	TCGA	3 cut(s)	34, 621, 3186
TaqII	GACCGA	1 cut(s)	2315
TatI	WGTACW	1 cut(s)	2046
TauI	GCSGC	1 cut(s)	85
TfiI	GAWTC	9 cut(s)	578, 794, 1018, 1135, 1232, 1463, 2370, 2549, 2937
TseFI	GTSAC	2 cut(s)	590, 1159
Tsp45I	GTSAC	2 cut(s)	590, 1159
TspGWI	ACGGA	1 cut(s)	2295
Van91I	CCANNNNNTGG	2 cut(s)	161, 397
Vha464I	CTTAAG	1 cut(s)	3011
VneI	GTGCAC	1 cut(s)	844
VpaK11BI	GGWCC	4 cut(s)	644, 1056, 1492, 2087
VspI	ATTAAT	1 cut(s)	669
XapI	RAATTY	7 cut(s)	102, 122, 331, 912, 1075, 2315, 2883
XmiI	GTMKAC	1 cut(s)	3109
XmnI	GAANNNNTTC	2 cut(s)	333, 517
XspI	CTAG	6 cut(s)	489, 1362, 1889, 2072, 2091, 3060
Zsp2I	ATGCAT	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.