RLG00000002297

calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0001204
Physical Location & Seq
Reverse (-)
31808625 .. 31815960
7336 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002297

Sequence Viewer

Length: 3090 bp
ATGAGAAAATACACCCCCAATCAGCAACTAGACCTTGTCCAGATATTGCAAGAATCACAGCAGCGTTGGCTCCGGCCGACTGAAATTTGTGAAATACTGCGCAACTACCAAAGGTTTCAGTTAACCCCAGATCCACCCGTCAGGCCTCCAGCTGGTTCTTTGTTCCTCTTTGATCGTAAAGCACTTCGGTATTTTCGTAAAGATGGTCACCGCTGGAGGAAGAAAAAGGATGGAAAGACTGTCAAAGAAGCGCATGAAAAGTTGAAGGCTGGTAGTGTAGACGTTCTTCACTGTTACTATGCCCATGGGGAGGACAATGAGAATTTTCAGCGGAGGAGTTATTGGATGCTTGATACTCATTTACAACACATTGTTCTTGTGCATTACAGAATGGTTGAGGGGAGCAAGTCTGGTGTCTCCCGTTTGCTGGTTGATCCAGGATCACAGGTTGGAAGCCCTCAAACTGCTTCAGCACCTTGCTCTGCACAAGCAAACTCACCTGCCCCTGCAGTTCAAACATCTTTTGCTTCAAGTCCAATCAAAGTTGACTGGAATCGACAAACATTATCTACAGAATTTGAGGATGTGGATTCTCGGGGTGATGCTGGAGCTTCGTCTCTTGCTCCTGGTTCTGTTTTGAACAATGCTTGTCTACAGTTATCAGAAGTTGGAAGTACAATATGTGATCAGCCTCTCTGGTGCTTTTCAGGACTTTCTGAGTCATTCAGGAATCCTTCTGGTACATGGTATGCTGGACCTAAAGATTATCAAAGTGCTGGTTCATCTGACTGGGCCATGGACAGATCAACAAGAGAGTCCAGCCTGCATGACGAAAATCTTTTTGTTGAAGACATAAAGAAAAATTTCTTTGAAGAACTTAATGGATCGGACTCCATAACTCATAAGCTAACAGACGCTAGACTGGATAGTAATAGGAAAGGCAAAGATGTAACTTCTGAAGATAGTTTGACCAATGACATAGATGTGCAGGCTGTCACAACCCCTTCCCAGAGAGAAGCTCAGGTTGCAAAGGAATTTGACTTCAGTCTGTTTCATTCCCAGTTTCAGGGCCATTCTGATCCTCACACAGTAGCTTTTTCTACTGCCCAAGTTGAGAAGAGTTCTGGAGATGGTGGTGTGCGTAGAGGTGAACCAGTCGAGCTGAAGAAACTCGACAGCTTTGGTAGATGGATGGATAAAGAAATTGGTGTGGATTGTGATGATTCGTTGATGGCTTCAGACTCTGGAAATTACTGGAATACACTTGAGGCTGAGAATGGTGATAGGGAAGTTTCCAGTTTATCAGGCCATATGCAGCTAGATGTTGATTCACTTGGCCCTTCTCTTTCCCAGGAACAACTATTTAGTATATGTGATTTTTCTCCAGATTGGTCTTATTCAGGAACTGAAACAAAGGTTTTAATAGTTGGAAGATTTTTAGGAGGCAAGAAGAATTTTACTGAGACCAAGTGGGGATGCATGTTTGGTGAAATAGAGGTTCCTGCTGAAGTTCTGACTGATAATGTTATTCGATGTCAAACTCCTTTACATGCTCCTGGGTGTGTTCCATTCTATGTGACTTGCAGAAATAGGTTGGCCTGCAGTGAGGTGAGGGAGTTTGAATATAGAGAAAAACCTATCGGGATATCTCTAAACAGCTCTAGAGAAGATGAATTGCGCTTTCAGATTCGTCTTGCAAAATTGTTGAACTTGGGATCAGAGAGGAAGTGGTTGGAATGTTCTGCTTTGGATTGTGATAAATGTAAGCTCAAAAGTTCCATATGTTCAATAAGAAGCAACAGTGGGAGTGATTGGATGATAGCTGATGGAGATTCTATGGCATGCAAACATGATCAGTTGACCCACATAGATGTATTGATTCAGAATTTGTTGAAGGATAGACTTTTTGAATGGCTGGTATATAAAGTTCATGAAGAAGGTAAAGGACCACATGTTTTAGATAATGAAGGCCAAGGCGTTCTACATTTGGCAGGTGCTCTTGGTTATGAATGGGCGATGGGTCTCATAGTTGCTGCTGGTGTTAGTCCTAATTTCAGAGATGCCCGTGGAAGAACGGGACTTCACTGGGCATCATATTTTGGAAGAGAGGAAACAGTGATCACATTACTTGGATTGGGTGCTGCTCCAGGTGCTGTTGAGGACCCAACGCCAGCATTTCCTGGAGGACAAACAGCCGCTGATCTAGCCTCAAGTAGAGGCCACAAAGGGATTGCTGGATATTTGGCAGAAGCTGATCTAACCAGTCACCTGTCATTGTTGACCATCAATGAGAAAACAATGGATAATGTTTCCGCAACTTTTGCAGCTGAAAAGTCTATCGAGATTTCAGAAGCTATAACATCTGATGTGACGGTAGAAGATGAAAATTCTCTGAAAGGTTCTCTAGCAGCAGTTAGGAAATCAGCCCATGCGGCTGCTCTGATTCAAGCAACTTTCCGTGCTCGTTCATTCCACCAGAGACAATTAACTCAGAGCAGCATTGATGTTCCTGAAGCTTCTATTGACCTAGTTGCACTTGGTTCCTTGAAGAGAGTTCAAAAGTTCAGTCACTATGAAGATTATCTGCATTCTGCAGCAGCTCTGAAGATACAAAGAAAATATCGTGGTTGGAAGGGGAGAAAGGAATTTTTGAAGATACGTAACCGTATAGTCAAACTTCAGGCTCATGTGAGGGGACATCAGGTTCGTAAGAATTACAAAAAGCTTGTTTGGTCTGTTGGTATAATGGAGAAAGTAATATTGCGTTGGAGGCGGAAACGGCCTGGTTTGCGAGGATTTCGGGTGGAAAAGGCTATTGAAGATGTATCTTCAGAGAATAAAAGAAGTGATGACTATGAATTTTTGAGTGTTGGGAGGAAGCAGAAATTTGCTGGAGTTGAGAAAGCTCTTGCAAGGGTACGGTCCATGTCTCGTCACCCTGAAGCACGTGAACAGTATATGAGGTTACAGTCAAAGTTTGAGAAGCTTAAGATGGCTGATGGGAGTGGTGCCCCAAATAAAATTGAAGGAGGTTCTGTTCACTGCAGAAAGGAAAAGGGGAAGGGCGACATTAATACTCATACAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 CG-1 IQ TIG

Protein Analysis

1030

Amino Acids

115.0

Weight (kDa)

7.37

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 19 - 130 1.8e-49 CG-1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 508, 1982
Acc16I TGCGCA 1 cut(s) 101
Acc36I ACCTGC 2 cut(s) 508, 1982
AccB1I GGYRCC 1 cut(s) 3008
AccI GTMKAC 2 cut(s) 279, 652
AciI CCGC 6 cut(s) 211, 331, 2196, 2313, 2432, 2773
AclWI GGATC 6 cut(s) 125, 428, 448, 892, 1073, 1723
AcoI YGGCCR 1 cut(s) 74
AcvI CACGTG 1 cut(s) 2948
AfaI GTAC 3 cut(s) 676, 742, 2919
AfiI CCNNNNNNNGG 4 cut(s) 152, 310, 427, 1066
AflII CTTAAG 1 cut(s) 2987
AflIII ACRYGT 1 cut(s) 1951
AjnI CCWGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
AloI GAACNNNNNNTCC 4 cut(s) 2688, 2720, 3021, 3053
Alw21I GWGCWC 2 cut(s) 1999, 2464
Alw26I GTCTC 6 cut(s) 421, 621, 1457, 2027, 2473, 2934
AlwI GGATC 6 cut(s) 125, 428, 448, 892, 1073, 1723
AlwNI CAGNNNCTG 5 cut(s) 1244, 1406, 2153, 2198, 2252
Ama87I CYCGRG 1 cut(s) 594
ArsI GACNNNNNNTTYG 4 cut(s) 2551, 2583, 2688, 2720
AseI ATTAAT 1 cut(s) 3072
Asp700I GAANNNNTTC 1 cut(s) 863
AspLEI GCGC 3 cut(s) 102, 253, 1680
AspS9I GGNCC 7 cut(s) 755, 792, 1069, 1337, 1946, 2161, 2922
AsuHPI GGTGA 9 cut(s) 200, 489, 611, 1160, 1292, 1499, 1621, 2258, 2927
AvaI CYCGRG 1 cut(s) 594
AvaII GGWCC 4 cut(s) 755, 1946, 2161, 2922
BaeGI GKGCMC 1 cut(s) 3013
BanI GGYRCC 1 cut(s) 3008
BarI GAAGNNNNNNTAC 2 cut(s) 270, 302
BbrPI CACGTG 1 cut(s) 2948
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 2 cut(s) 1999, 2464
BceAI ACGGC 1 cut(s) 2795
BciT130I CCWGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
BclI TGATCA 3 cut(s) 685, 1852, 2118
BcoDI GTCTC 6 cut(s) 421, 621, 1457, 2027, 2473, 2934
BfaI CTAG 7 cut(s) 29, 918, 1319, 1662, 2204, 2405, 2528
BfmI CTRYAG 6 cut(s) 507, 570, 653, 1600, 2592, 3043
BfrI CTTAAG 1 cut(s) 2987
BfuAI ACCTGC 2 cut(s) 508, 1982
BglI GCCNNNNNGGC 1 cut(s) 2432
Bme1390I CCNGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
Bme18I GGWCC 4 cut(s) 755, 1946, 2161, 2922
BmeT110I CYCGRG 1 cut(s) 594
BmgT120I GGNCC 7 cut(s) 755, 792, 1069, 1337, 1946, 2161, 2922
BmiI GGNNCC 5 cut(s) 71, 1500, 2163, 2542, 3010
BmrFI CCNGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
BmrI ACTGGG 3 cut(s) 799, 1054, 2095
BmsI GCATC 5 cut(s) 336, 592, 1466, 2050, 2099
BmuI ACTGGG 3 cut(s) 799, 1054, 2095
BoxI GACNNNNGTC 1 cut(s) 1044
BpiI GAAGAC 1 cut(s) 855
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
BpmI CTGGAG 8 cut(s) 132, 235, 627, 1146, 1368, 2130, 2202, 2913
Bpu10I CCTNAGC 1 cut(s) 1020
BpuEI CTTGAG 2 cut(s) 1286, 2194
BsaAI YACGTR 2 cut(s) 2660, 2948
BsaI GGTCTC 2 cut(s) 1457, 2027
BsaJI CCNNGG 6 cut(s) 304, 795, 1350, 1556, 1972, 2065
BsaXI ACNNNNNCTCC 2 cut(s) 3021, 3051
Bsc4I CCNNNNNNNGG 4 cut(s) 152, 310, 427, 1066
Bse1I ACTGG 9 cut(s) 554, 794, 927, 1060, 1154, 1259, 1296, 2090, 2262
BseBI CCWGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
BseDI CCNNGG 6 cut(s) 304, 795, 1350, 1556, 1972, 2065
BseGI GGATG 6 cut(s) 235, 351, 589, 1197, 1481, 1821
BseLI CCNNNNNNNGG 4 cut(s) 152, 310, 427, 1066
BseMII CTCAG 5 cut(s) 708, 1034, 1263, 1452, 2504
BseNI ACTGG 9 cut(s) 554, 794, 927, 1060, 1154, 1259, 1296, 2090, 2262
BseRI GAGGAG 1 cut(s) 349
BseSI GKGCMC 1 cut(s) 3013
BseX3I CGGCCG 1 cut(s) 74
BsgI GTGCAG 2 cut(s) 468, 1007
Bsh1285I CGRYCG 1 cut(s) 77
BshNI GGYRCC 1 cut(s) 3008
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 2 cut(s) 1999, 2464
BsiHKCI CYCGRG 1 cut(s) 594
BsiSI CCGG 1 cut(s) 73
BslFI GGGAC 2 cut(s) 2091, 2709
BslI CCNNNNNNNGG 4 cut(s) 152, 310, 427, 1066
BsmAI GTCTC 6 cut(s) 421, 621, 1457, 2027, 2473, 2934
BsmBI CGTCTC 1 cut(s) 621
BsmFI GGGAC 2 cut(s) 2091, 2709
BsmI GAATGC 1 cut(s) 2587
Bso31I GGTCTC 2 cut(s) 1457, 2027
BsoBI CYCGRG 1 cut(s) 594
Bsp1286I GDGCHC 3 cut(s) 1999, 2464, 3013
Bsp19I CCATGG 2 cut(s) 304, 795
BspACI CCGC 6 cut(s) 211, 331, 2196, 2313, 2432, 2773
BspCNI CTCAG 5 cut(s) 709, 1033, 1264, 1453, 2503
BspHI TCATGA 1 cut(s) 1930
BspLI GGNNCC 5 cut(s) 71, 1500, 2163, 2542, 3010
BspMAI CTGCAG 4 cut(s) 511, 1604, 2596, 3047
BspMI ACCTGC 2 cut(s) 508, 1982
BspPI GGATC 6 cut(s) 125, 428, 448, 892, 1073, 1723
BspT107I GGYRCC 1 cut(s) 3008
BspTI CTTAAG 1 cut(s) 2987
BspTNI GGTCTC 2 cut(s) 1457, 2027
BsrI ACTGG 9 cut(s) 554, 794, 927, 1060, 1154, 1259, 1296, 2090, 2262
BssECI CCNNGG 6 cut(s) 304, 795, 1350, 1556, 1972, 2065
BssT1I CCWWGG 3 cut(s) 304, 795, 1972
Bst2UI CCWGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
Bst6I CTCTTC 3 cut(s) 1112, 2098, 2543
BstAFI CTTAAG 1 cut(s) 2987
BstAPI GCANNNNNTGC 1 cut(s) 2321
BstBAI YACGTR 2 cut(s) 2660, 2948
BstC8I GCNNGC 5 cut(s) 824, 990, 1600, 1843, 2172
BstDEI CTNAG 5 cut(s) 717, 1020, 1272, 1461, 2490
BstDSI CCRYGG 3 cut(s) 304, 795, 2065
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 6 cut(s) 235, 351, 589, 1197, 1481, 1821
BstHHI GCGC 3 cut(s) 102, 253, 1680
BstMAI GTCTC 6 cut(s) 421, 621, 1457, 2027, 2473, 2934
BstMCI CGRYCG 1 cut(s) 77
BstMWI GCNNNNNNNGC 9 cut(s) 67, 1025, 2150, 2204, 2321, 2432, 2770, 2779, 2788
BstNI CCWGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
BstNSI RCATGY 4 cut(s) 1483, 1553, 1845, 1955
BstPAI GACNNNNGTC 1 cut(s) 1044
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
BstSFI CTRYAG 6 cut(s) 507, 570, 653, 1600, 2592, 3043
BstSLI GKGCMC 1 cut(s) 3013
BstSNI TACGTA 1 cut(s) 2660
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
BstZI CGGCCG 1 cut(s) 74
BtgI CCRYGG 3 cut(s) 304, 795, 2065
BtgZI GCGATG 1 cut(s) 2030
BtsCI GGATG 6 cut(s) 235, 351, 589, 1197, 1481, 1821
BtsI GCAGTG 2 cut(s) 1609, 3040
BtsIMutI CAGTG 6 cut(s) 289, 1609, 1807, 2083, 2121, 3040
BveI ACCTGC 2 cut(s) 508, 1982
Cac8I GCNNGC 5 cut(s) 824, 990, 1600, 1843, 2172
CaiI CAGNNNCTG 5 cut(s) 1244, 1406, 2153, 2198, 2252
CciI TCATGA 1 cut(s) 1930
CfoI GCGC 3 cut(s) 102, 253, 1680
Cfr13I GGNCC 7 cut(s) 755, 792, 1069, 1337, 1946, 2161, 2922
CseI GACGC 1 cut(s) 923
Csp6I GTAC 3 cut(s) 675, 741, 2918
CviQI GTAC 3 cut(s) 675, 741, 2918
DdeI CTNAG 5 cut(s) 717, 1020, 1272, 1461, 2490
EaeI YGGCCR 1 cut(s) 74
EagI CGGCCG 1 cut(s) 74
Eam1104I CTCTTC 3 cut(s) 1112, 2098, 2543
EarI CTCTTC 3 cut(s) 1112, 2098, 2543
EciI GGCGGA 1 cut(s) 2788
EclXI CGGCCG 1 cut(s) 74
Eco105I TACGTA 1 cut(s) 2660
Eco130I CCWWGG 3 cut(s) 304, 795, 1972
Eco147I AGGCCT 1 cut(s) 145
Eco31I GGTCTC 2 cut(s) 1457, 2027
Eco32I GATATC 1 cut(s) 1647
Eco47I GGWCC 4 cut(s) 755, 1946, 2161, 2922
Eco52I CGGCCG 1 cut(s) 74
Eco72I CACGTG 1 cut(s) 2948
Eco88I CYCGRG 1 cut(s) 594
Eco91I GGTNACC 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 2161
EcoO65I GGTNACC 1 cut(s) 206
EcoRII CCWGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
EcoRV GATATC 1 cut(s) 1647
EcoT14I CCWWGG 3 cut(s) 304, 795, 1972
EcoT22I ATGCAT 1 cut(s) 1481
ErhI CCWWGG 3 cut(s) 304, 795, 1972
Esp3I CGTCTC 1 cut(s) 621
FaqI GGGAC 2 cut(s) 2091, 2709
FauNDI CATATG 2 cut(s) 1311, 1781
FbaI TGATCA 3 cut(s) 685, 1852, 2118
FblI GTMKAC 2 cut(s) 279, 652
FokI GGATG 6 cut(s) 242, 358, 596, 1204, 1488, 1828
FspBI CTAG 7 cut(s) 29, 918, 1319, 1662, 2204, 2405, 2528
FspI TGCGCA 1 cut(s) 101
GlaI GCGC 3 cut(s) 101, 252, 1679
GsuI CTGGAG 8 cut(s) 132, 235, 627, 1146, 1368, 2130, 2202, 2913
HapII CCGG 1 cut(s) 73
HgaI GACGC 1 cut(s) 923
HhaI GCGC 3 cut(s) 102, 253, 1680
Hin6I GCGC 3 cut(s) 100, 251, 1678
HinP1I GCGC 3 cut(s) 100, 251, 1678
HincII GTYRAC 4 cut(s) 123, 547, 1860, 2280
HindII GTYRAC 4 cut(s) 123, 547, 1860, 2280
HindIII AAGCTT 3 cut(s) 2514, 2723, 2984
HpaI GTTAAC 1 cut(s) 123
HpaII CCGG 1 cut(s) 73
HphI GGTGA 9 cut(s) 200, 489, 611, 1160, 1292, 1499, 1621, 2258, 2927
Hpy166II GTNNAC 9 cut(s) 123, 280, 547, 653, 1151, 1860, 2280, 2951, 3040
Hpy8I GTNNAC 9 cut(s) 123, 280, 547, 653, 1151, 1860, 2280, 2951, 3040
HpyCH4IV ACGT 3 cut(s) 282, 2659, 2947
HpyF10VI GCNNNNNNNGC 9 cut(s) 67, 1025, 2150, 2204, 2321, 2432, 2770, 2779, 2788
HpyF3I CTNAG 5 cut(s) 717, 1020, 1272, 1461, 2490
HpySE526I ACGT 3 cut(s) 282, 2659, 2947
HspAI GCGC 3 cut(s) 100, 251, 1678
Ksp22I TGATCA 3 cut(s) 685, 1852, 2118
KspAI GTTAAC 1 cut(s) 123
LmnI GCTCC 6 cut(s) 75, 402, 608, 628, 1558, 2149
LweI GCATC 5 cut(s) 336, 592, 1466, 2050, 2099
MaeI CTAG 7 cut(s) 29, 918, 1319, 1662, 2204, 2405, 2528
MaeII ACGT 3 cut(s) 282, 2659, 2947
MflI RGATCY 1 cut(s) 130
MhlI GDGCHC 3 cut(s) 1999, 2464, 3013
MlyI GAGTC 4 cut(s) 728, 824, 884, 1235
MmeI TCCRAC 6 cut(s) 430, 649, 1408, 1713, 2609, 2747
Mph1103I ATGCAT 1 cut(s) 1481
MroXI GAANNNNTTC 1 cut(s) 863
MseI TTAA 6 cut(s) 122, 879, 1421, 2486, 2988, 3072
MslI CAYNNNNRTG 2 cut(s) 983, 1869
MspA1I CMGCKG 5 cut(s) 152, 213, 331, 2198, 2327
MspCI CTTAAG 1 cut(s) 2987
MspI CCGG 1 cut(s) 73
MspR9I CCNGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
Mva1269I GAATGC 1 cut(s) 2587
MvaI CCWGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
MwoI GCNNNNNNNGC 9 cut(s) 67, 1025, 2150, 2204, 2321, 2432, 2770, 2779, 2788
NcoI CCATGG 2 cut(s) 304, 795
NdeI CATATG 2 cut(s) 1311, 1781
NlaIV GGNNCC 5 cut(s) 71, 1500, 2163, 2542, 3010
NmuCI GTSAC 7 cut(s) 206, 994, 1576, 2264, 2368, 2567, 2933
NsbI TGCGCA 1 cut(s) 101
NsiI ATGCAT 1 cut(s) 1481
NspI RCATGY 4 cut(s) 1483, 1553, 1845, 1955
PaeI GCATGC 1 cut(s) 1845
PagI TCATGA 1 cut(s) 1930
PaqCI CACCTGC 2 cut(s) 508, 1982
PceI AGGCCT 1 cut(s) 145
PciI ACATGT 1 cut(s) 1951
PcsI WCGNNNNNNNCGW 1 cut(s) 193
PctI GAATGC 1 cut(s) 2587
PdmI GAANNNNTTC 1 cut(s) 863
PflFI GACNNNGTC 1 cut(s) 35
PfoI TCCNGGA 2 cut(s) 436, 2179
PleI GAGTC 4 cut(s) 727, 823, 884, 1235
PmaCI CACGTG 1 cut(s) 2948
PmlI CACGTG 1 cut(s) 2948
PpsI GAGTC 4 cut(s) 727, 823, 884, 1235
Ppu21I YACGTR 2 cut(s) 2660, 2948
PpuMI RGGWCCY 1 cut(s) 2161
PscI ACATGT 1 cut(s) 1951
PshAI GACNNNNGTC 1 cut(s) 1044
PshBI ATTAAT 1 cut(s) 3072
Psp5II RGGWCCY 1 cut(s) 2161
Psp6I CCWGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
PspCI CACGTG 1 cut(s) 2948
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
PspN4I GGNNCC 5 cut(s) 71, 1500, 2163, 2542, 3010
PspPI GGNCC 7 cut(s) 755, 792, 1069, 1337, 1946, 2161, 2922
PspPPI RGGWCCY 1 cut(s) 2161
PsrI GAACNNNNNNTAC 2 cut(s) 1911, 1943
PstI CTGCAG 4 cut(s) 511, 1604, 2596, 3047
PstNI CAGNNNCTG 5 cut(s) 1244, 1406, 2153, 2198, 2252
PsuI RGATCY 1 cut(s) 130
PsyI GACNNNGTC 1 cut(s) 35
PvuII CAGCTG 2 cut(s) 152, 2327
RsaI GTAC 3 cut(s) 676, 742, 2919
RsaNI GTAC 3 cut(s) 675, 741, 2918
RseI CAYNNNNRTG 2 cut(s) 983, 1869
SaqAI TTAA 6 cut(s) 122, 879, 1421, 2486, 2988, 3072
Sau96I GGNCC 7 cut(s) 755, 792, 1069, 1337, 1946, 2161, 2922
SchI GAGTC 4 cut(s) 728, 824, 884, 1235
ScrFI CCNGG 7 cut(s) 438, 627, 1352, 1557, 2148, 2181, 2784
SduI GDGCHC 3 cut(s) 1999, 2464, 3013
SfaNI GCATC 5 cut(s) 336, 592, 1466, 2050, 2099
SfcI CTRYAG 6 cut(s) 507, 570, 653, 1600, 2592, 3043
SinI GGWCC 4 cut(s) 755, 1946, 2161, 2922
SmiMI CAYNNNNRTG 2 cut(s) 983, 1869
SmlI CTYRAG 3 cut(s) 1265, 2209, 2987
SmoI CTYRAG 3 cut(s) 1265, 2209, 2987
SnaBI TACGTA 1 cut(s) 2660
SphI GCATGC 1 cut(s) 1845
SseBI AGGCCT 1 cut(s) 145
SsiI CCGC 6 cut(s) 211, 331, 2196, 2313, 2432, 2773
SspI AATATT 1 cut(s) 2760
SspMI CTAG 7 cut(s) 29, 918, 1319, 1662, 2204, 2405, 2528
StuI AGGCCT 1 cut(s) 145
StyD4I CCNGG 7 cut(s) 436, 625, 1350, 1555, 2146, 2179, 2782
StyI CCWWGG 3 cut(s) 304, 795, 1972
TaiI ACGT 3 cut(s) 285, 2662, 2950
TaqI TCGA 5 cut(s) 556, 1158, 1173, 1531, 2340
TatI WGTACW 1 cut(s) 674
TauI GCSGC 2 cut(s) 2198, 2435
Tru1I TTAA 6 cut(s) 122, 879, 1421, 2486, 2988, 3072
Tru9I TTAA 6 cut(s) 122, 879, 1421, 2486, 2988, 3072
TscAI CASTG 6 cut(s) 296, 1609, 1807, 2090, 2121, 3047
TseFI GTSAC 7 cut(s) 206, 994, 1576, 2264, 2368, 2567, 2933
Tsp45I GTSAC 7 cut(s) 206, 994, 1576, 2264, 2368, 2567, 2933
TspGWI ACGGA 1 cut(s) 2447
TspRI CASTG 6 cut(s) 296, 1609, 1807, 2090, 2121, 3047
Tth111I GACNNNGTC 1 cut(s) 35
Vha464I CTTAAG 1 cut(s) 2987
VpaK11BI GGWCC 4 cut(s) 755, 1946, 2161, 2922
VspI ATTAAT 1 cut(s) 3072
XbaI TCTAGA 1 cut(s) 1661
XceI RCATGY 4 cut(s) 1483, 1553, 1845, 1955
XmiI GTMKAC 2 cut(s) 279, 652
XmnI GAANNNNTTC 1 cut(s) 863
XspI CTAG 7 cut(s) 29, 918, 1319, 1662, 2204, 2405, 2528
Zsp2I ATGCAT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.