MD15G1186700.v1.1

Zinc finger protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
14734421 .. 14735153
733 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1186700.v1.1.491

Sequence Viewer

Length: 354 bp
ATGAATTTGGCGGGTGAGAGTGAGAGAGTCGAGAGAGAGTTGGAGAAATCAATGGATAACAGAGAAGCAGATCAGAAAGTGCCAGTTTTCAAGGACATAAGGCGATATTACTGTGAATTCTGCGGGATCTGCCGCTTCAAAGAGACTCTGATCGCTTCTCACATCCTCAATCACCACAAGATGGATATGGCAAAAGAGGCTGGTGGGGAAGGGGAAGGAGAGAAGGAAAAATGTAATACTTGCGAAGAATGTGGTGCTACTTTCAAAAAACCTGCACATTTGAAGCAACACATTCAAAGCCACTCCCTTGAGGTATTTGATTGCTATCGAATTCAAAGGCATCGATATTTTTAA

Protein Analysis

118

Amino Acids

13.77

Weight (kDa)

6.65

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 181
AciI CCGC 3 cut(s) 11, 123, 133
AclWI GGATC 1 cut(s) 134
AcsI RAATTY 3 cut(s) 4, 116, 330
AfiI CCNNNNNNNGG 1 cut(s) 181
AgsI TTSAA 6 cut(s) 91, 139, 265, 283, 296, 335
Alw26I GTCTC 1 cut(s) 137
AlwI GGATC 1 cut(s) 134
ApoI RAATTY 3 cut(s) 4, 116, 330
AsuHPI GGTGA 2 cut(s) 26, 164
BccI CCATC 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 137
BfuAI ACCTGC 1 cut(s) 280
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
BmsI GCATC 1 cut(s) 349
BpuEI CTTGAG 1 cut(s) 329
Bsa29I ATCGAT 1 cut(s) 343
BsaBI GATNNNNATC 1 cut(s) 324
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse1I ACTGG 1 cut(s) 83
Bse8I GATNNNNATC 1 cut(s) 324
BseCI ATCGAT 1 cut(s) 343
BseGI GGATG 1 cut(s) 162
BseJI GATNNNNATC 1 cut(s) 324
BseLI CCNNNNNNNGG 1 cut(s) 181
BseNI ACTGG 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 258
BshVI ATCGAT 1 cut(s) 343
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 1 cut(s) 137
Bsp143I GATC 3 cut(s) 70, 126, 150
BspACI CCGC 3 cut(s) 11, 123, 133
BspDI ATCGAT 1 cut(s) 343
BspMI ACCTGC 1 cut(s) 280
BspPI GGATC 1 cut(s) 134
BsrI ACTGG 1 cut(s) 83
BssMI GATC 3 cut(s) 70, 126, 150
Bst4CI ACNGT 1 cut(s) 113
BstF5I GGATG 1 cut(s) 162
BstKTI GATC 3 cut(s) 73, 129, 153
BstMAI GTCTC 1 cut(s) 137
BstMBI GATC 3 cut(s) 70, 126, 150
BstMWI GCNNNNNNNGC 2 cut(s) 129, 197
BstX2I RGATCY 1 cut(s) 126
BstYI RGATCY 1 cut(s) 126
Bsu15I ATCGAT 1 cut(s) 343
BsuTUI ATCGAT 1 cut(s) 343
BtsCI GGATG 1 cut(s) 162
BveI ACCTGC 1 cut(s) 280
ClaI ATCGAT 1 cut(s) 343
CviJI RGCY 2 cut(s) 200, 300
CviKI_1 RGCY 2 cut(s) 200, 300
DpnI GATC 3 cut(s) 72, 128, 152
DpnII GATC 3 cut(s) 70, 126, 150
EcoRI GAATTC 2 cut(s) 116, 330
FaiI YATR 2 cut(s) 98, 188
FauI CCCGC 2 cut(s) 4, 116
Fnu4HI GCNGC 1 cut(s) 133
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 133
GluI GCNGC 1 cut(s) 133
HinfI GANTC 2 cut(s) 27, 145
HphI GGTGA 2 cut(s) 26, 164
Hpy188I TCNGA 2 cut(s) 75, 150
Hpy188III TCNNGA 1 cut(s) 31
HpyAV CCTTC 3 cut(s) 203, 209, 217
HpyCH4III ACNGT 1 cut(s) 113
HpyCH4V TGCA 1 cut(s) 275
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 197
Kzo9I GATC 3 cut(s) 70, 126, 150
LpnPI CCDG 3 cut(s) 96, 186, 285
LweI GCATC 1 cut(s) 349
MalI GATC 3 cut(s) 72, 128, 152
MboI GATC 3 cut(s) 70, 126, 150
MboII GAAGA 1 cut(s) 257
MflI RGATCY 1 cut(s) 126
MluCI AATT 3 cut(s) 4, 116, 330
MlyI GAGTC 2 cut(s) 36, 139
MmeI TCCRAC 1 cut(s) 21
MnlI CCTC 3 cut(s) 176, 190, 304
MseI TTAA 1 cut(s) 352
MwoI GCNNNNNNNGC 2 cut(s) 129, 197
NdeII GATC 3 cut(s) 70, 126, 150
PflMI CCANNNNNTGG 1 cut(s) 181
PkrI GCNGC 1 cut(s) 134
PleI GAGTC 2 cut(s) 35, 139
PpsI GAGTC 2 cut(s) 35, 139
PsuI RGATCY 1 cut(s) 126
SaqAI TTAA 1 cut(s) 352
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 3 cut(s) 70, 126, 150
SchI GAGTC 2 cut(s) 36, 139
SetI ASST 2 cut(s) 274, 315
SfaNI GCATC 1 cut(s) 349
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 3 cut(s) 4, 116, 330
SsiI CCGC 3 cut(s) 11, 123, 133
TaaI ACNGT 1 cut(s) 113
TaqI TCGA 3 cut(s) 30, 328, 343
TasI AATT 3 cut(s) 4, 116, 330
TauI GCSGC 1 cut(s) 135
Tru1I TTAA 1 cut(s) 352
Tru9I TTAA 1 cut(s) 352
TspDTI ATGAA 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 181
XapI RAATTY 3 cut(s) 4, 116, 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.