Rh7AG382100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
49896960 .. 49908437
11478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG382100.1

Sequence Viewer

Length: 315 bp
ATGGCAAAGGCTGGTGGGGACGTTGTGGTGGAGAAGTCTAAGACATGTGAAGAATGTGGTGCTAGTCTCATTGGGGAGAAAATTCTCGAGTGGTCATCAAAAGCATACAATTCTTTTTATTTTTCTGCAGTACTGTATTCCTCATCTGCCATCTTAACTTTGTTGGCGAGCTTGAAAGGACTGTCCGAAGCAGCTTCTTATATTGATAGTGCTGTTCATGTACACAATCAAGTTGCTCTAGAAGTAGTAAACAATGCTCAGCTTTGGAGCTTGCTTCTTAAGATGAAAAATACTAGGTCAGGTGATGTATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

11.22

Weight (kDa)

6.06

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 309
AcsI RAATTY 1 cut(s) 81
AfaI GTAC 2 cut(s) 132, 222
AflII CTTAAG 1 cut(s) 278
AflIII ACRYGT 1 cut(s) 44
AgsI TTSAA 1 cut(s) 175
AluBI AGCT 4 cut(s) 171, 194, 262, 270
AluI AGCT 4 cut(s) 171, 194, 262, 270
Alw26I GTCTC 1 cut(s) 71
Ama87I CYCGRG 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 314
AvaI CYCGRG 1 cut(s) 86
BbvI GCAGC 1 cut(s) 203
BccI CCATC 1 cut(s) 158
BcoDI GTCTC 1 cut(s) 71
BfaI CTAG 3 cut(s) 63, 239, 294
BfmI CTRYAG 1 cut(s) 126
BfrI CTTAAG 1 cut(s) 278
BisI GCNGC 1 cut(s) 192
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 193
BmcAI AGTACT 1 cut(s) 132
BmeT110I CYCGRG 1 cut(s) 86
Bpu1102I GCTNAGC 1 cut(s) 258
BseMII CTCAG 1 cut(s) 272
BseXI GCAGC 1 cut(s) 203
BsiHKCI CYCGRG 1 cut(s) 86
BslFI GGGAC 1 cut(s) 32
BsmAI GTCTC 1 cut(s) 71
BsmFI GGGAC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 86
Bsp1407I TGTACA 1 cut(s) 220
Bsp1720I GCTNAGC 1 cut(s) 258
BspCNI CTCAG 1 cut(s) 271
BspMAI CTGCAG 1 cut(s) 130
BspTI CTTAAG 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 220
BssNAI GTATAC 1 cut(s) 310
Bst1107I GTATAC 1 cut(s) 310
Bst4CI ACNGT 2 cut(s) 135, 183
BstAFI CTTAAG 1 cut(s) 278
BstAUI TGTACA 1 cut(s) 220
BstC8I GCNNGC 2 cut(s) 169, 272
BstDEI CTNAG 2 cut(s) 39, 258
BstMAI GTCTC 1 cut(s) 71
BstNSI RCATGY 1 cut(s) 48
BstSFI CTRYAG 1 cut(s) 126
BstV1I GCAGC 1 cut(s) 203
BstZ17I GTATAC 1 cut(s) 310
Cac8I GCNNGC 2 cut(s) 169, 272
Csp6I GTAC 2 cut(s) 131, 221
CviAII CATG 2 cut(s) 45, 218
CviJI RGCY 5 cut(s) 11, 171, 194, 262, 270
CviKI_1 RGCY 5 cut(s) 11, 171, 194, 262, 270
CviQI GTAC 2 cut(s) 131, 221
DdeI CTNAG 2 cut(s) 39, 258
Eco88I CYCGRG 1 cut(s) 86
FaeI CATG 2 cut(s) 48, 221
FaiI YATR 5 cut(s) 46, 106, 201, 219, 310
FaqI GGGAC 1 cut(s) 32
FatI CATG 2 cut(s) 44, 217
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 1 cut(s) 192
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 3 cut(s) 63, 239, 294
GluI GCNGC 1 cut(s) 192
Hin1II CATG 2 cut(s) 48, 221
HphI GGTGA 1 cut(s) 314
Hpy166II GTNNAC 3 cut(s) 223, 250, 310
Hpy188I TCNGA 1 cut(s) 187
Hpy188III TCNNGA 2 cut(s) 86, 239
Hpy8I GTNNAC 3 cut(s) 223, 250, 310
HpyCH4III ACNGT 2 cut(s) 135, 183
HpyCH4IV ACGT 1 cut(s) 21
HpyCH4V TGCA 1 cut(s) 128
HpyF3I CTNAG 2 cut(s) 39, 258
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 2 cut(s) 48, 221
LmnI GCTCC 1 cut(s) 267
LpnPI CCDG 1 cut(s) 285
Lsp1109I GCAGC 1 cut(s) 203
MaeI CTAG 3 cut(s) 63, 239, 294
MaeII ACGT 1 cut(s) 21
MboII GAAGA 1 cut(s) 62
MluCI AATT 2 cut(s) 81, 109
MnlI CCTC 1 cut(s) 151
MseI TTAA 2 cut(s) 155, 279
MspCI CTTAAG 1 cut(s) 278
NlaIII CATG 2 cut(s) 48, 221
NspI RCATGY 1 cut(s) 48
PaeR7I CTCGAG 1 cut(s) 86
PciI ACATGT 1 cut(s) 44
PkrI GCNGC 1 cut(s) 193
PscI ACATGT 1 cut(s) 44
PstI CTGCAG 1 cut(s) 130
RsaI GTAC 2 cut(s) 132, 222
RsaNI GTAC 2 cut(s) 131, 221
SaqAI TTAA 2 cut(s) 155, 279
SatI GCNGC 1 cut(s) 192
ScaI AGTACT 1 cut(s) 132
SetI ASST 7 cut(s) 24, 173, 196, 264, 272, 299, 304
SfcI CTRYAG 1 cut(s) 126
Sfr274I CTCGAG 1 cut(s) 86
SlaI CTCGAG 1 cut(s) 86
SmlI CTYRAG 2 cut(s) 86, 278
SmoI CTYRAG 2 cut(s) 86, 278
Sse9I AATT 2 cut(s) 81, 109
SspMI CTAG 3 cut(s) 63, 239, 294
TaaI ACNGT 2 cut(s) 135, 183
TaiI ACGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 87
TasI AATT 2 cut(s) 81, 109
TatI WGTACW 2 cut(s) 130, 220
Tru1I TTAA 2 cut(s) 155, 279
Tru9I TTAA 2 cut(s) 155, 279
TseI GCWGC 1 cut(s) 191
TspDTI ATGAA 2 cut(s) 206, 299
Vha464I CTTAAG 1 cut(s) 278
XapI RAATTY 1 cut(s) 81
XbaI TCTAGA 1 cut(s) 238
XceI RCATGY 1 cut(s) 48
XhoI CTCGAG 1 cut(s) 86
XmiI GTMKAC 1 cut(s) 309
XspI CTAG 3 cut(s) 63, 239, 294
ZrmI AGTACT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.