Cleavage and polyadenylation specificity factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 180 |
| AcsI | RAATTY | 1 cut(s) | 359 |
| AcvI | CACGTG | 1 cut(s) | 379 |
| AfaI | GTAC | 2 cut(s) | 134, 343 |
| AgsI | TTSAA | 1 cut(s) | 193 |
| ApoI | RAATTY | 1 cut(s) | 359 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 2 cut(s) | 185, 365 |
| AvaII | GGWCC | 2 cut(s) | 185, 365 |
| BbrPI | CACGTG | 1 cut(s) | 379 |
| BbsI | GAAGAC | 1 cut(s) | 389 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BmcAI | AGTACT | 1 cut(s) | 343 |
| Bme18I | GGWCC | 2 cut(s) | 185, 365 |
| BmgT120I | GGNCC | 2 cut(s) | 185, 365 |
| BmsI | GCATC | 1 cut(s) | 217 |
| BpiI | GAAGAC | 1 cut(s) | 389 |
| Bpu10I | CCTNAGC | 1 cut(s) | 212 |
| BsaAI | YACGTR | 2 cut(s) | 9, 379 |
| BsaBI | GATNNNNATC | 1 cut(s) | 410 |
| Bse1I | ACTGG | 1 cut(s) | 273 |
| Bse8I | GATNNNNATC | 1 cut(s) | 410 |
| BseJI | GATNNNNATC | 1 cut(s) | 410 |
| BseMII | CTCAG | 2 cut(s) | 336, 383 |
| BseNI | ACTGG | 1 cut(s) | 273 |
| BspCNI | CTCAG | 2 cut(s) | 337, 384 |
| BsrI | ACTGG | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 369 |
| BstBAI | YACGTR | 2 cut(s) | 9, 379 |
| BstDEI | CTNAG | 3 cut(s) | 212, 345, 392 |
| BstNSI | RCATGY | 1 cut(s) | 139 |
| BstV2I | GAAGAC | 1 cut(s) | 389 |
| Cfr13I | GGNCC | 2 cut(s) | 185, 365 |
| Csp6I | GTAC | 2 cut(s) | 133, 342 |
| CviAII | CATG | 3 cut(s) | 136, 287, 415 |
| CviJI | RGCY | 1 cut(s) | 211 |
| CviKI_1 | RGCY | 1 cut(s) | 211 |
| CviQI | GTAC | 2 cut(s) | 133, 342 |
| DdeI | CTNAG | 3 cut(s) | 212, 345, 392 |
| Eco47I | GGWCC | 2 cut(s) | 185, 365 |
| Eco72I | CACGTG | 1 cut(s) | 379 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 3 cut(s) | 139, 290, 418 |
| FatI | CATG | 3 cut(s) | 135, 286, 414 |
| FspBI | CTAG | 1 cut(s) | 240 |
| Hin1II | CATG | 3 cut(s) | 139, 290, 418 |
| HincII | GTYRAC | 1 cut(s) | 178 |
| HindII | GTYRAC | 1 cut(s) | 178 |
| HinfI | GANTC | 3 cut(s) | 77, 167, 394 |
| HpaI | GTTAAC | 1 cut(s) | 178 |
| Hpy166II | GTNNAC | 1 cut(s) | 178 |
| Hpy188I | TCNGA | 1 cut(s) | 402 |
| Hpy188III | TCNNGA | 2 cut(s) | 240, 332 |
| Hpy8I | GTNNAC | 1 cut(s) | 178 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyAV | CCTTC | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 369 |
| HpyCH4IV | ACGT | 3 cut(s) | 8, 180, 378 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 139, 224, 230, 353, 376 |
| HpyF3I | CTNAG | 3 cut(s) | 212, 345, 392 |
| HpySE526I | ACGT | 3 cut(s) | 8, 180, 378 |
| Hsp92II | CATG | 3 cut(s) | 139, 290, 418 |
| KspAI | GTTAAC | 1 cut(s) | 178 |
| LpnPI | CCDG | 4 cut(s) | 148, 254, 267, 345 |
| LweI | GCATC | 1 cut(s) | 217 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MaeII | ACGT | 3 cut(s) | 8, 180, 378 |
| MboII | GAAGA | 2 cut(s) | 305, 389 |
| MluCI | AATT | 4 cut(s) | 243, 259, 324, 359 |
| MlyI | GAGTC | 1 cut(s) | 403 |
| MnlI | CCTC | 2 cut(s) | 135, 340 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 197 |
| MseI | TTAA | 3 cut(s) | 45, 177, 424 |
| NlaIII | CATG | 3 cut(s) | 139, 290, 418 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 197 |
| PfeI | GAWTC | 2 cut(s) | 77, 167 |
| PleI | GAGTC | 1 cut(s) | 402 |
| PmaCI | CACGTG | 1 cut(s) | 379 |
| PmlI | CACGTG | 1 cut(s) | 379 |
| PpsI | GAGTC | 1 cut(s) | 402 |
| Ppu21I | YACGTR | 2 cut(s) | 9, 379 |
| Psp1406I | AACGTT | 1 cut(s) | 180 |
| PspCI | CACGTG | 1 cut(s) | 379 |
| PspPI | GGNCC | 2 cut(s) | 185, 365 |
| RsaI | GTAC | 2 cut(s) | 134, 343 |
| RsaNI | GTAC | 2 cut(s) | 133, 342 |
| SaqAI | TTAA | 3 cut(s) | 45, 177, 424 |
| Sau96I | GGNCC | 2 cut(s) | 185, 365 |
| ScaI | AGTACT | 1 cut(s) | 343 |
| SchI | GAGTC | 1 cut(s) | 403 |
| SetI | ASST | 6 cut(s) | 11, 146, 183, 286, 351, 381 |
| SfaNI | GCATC | 1 cut(s) | 217 |
| SinI | GGWCC | 2 cut(s) | 185, 365 |
| Sse9I | AATT | 4 cut(s) | 243, 259, 324, 359 |
| SspMI | CTAG | 1 cut(s) | 240 |
| TaaI | ACNGT | 1 cut(s) | 369 |
| TaiI | ACGT | 3 cut(s) | 11, 183, 381 |
| TasI | AATT | 4 cut(s) | 243, 259, 324, 359 |
| TatI | WGTACW | 1 cut(s) | 341 |
| TfiI | GAWTC | 2 cut(s) | 77, 167 |
| Tru1I | TTAA | 3 cut(s) | 45, 177, 424 |
| Tru9I | TTAA | 3 cut(s) | 45, 177, 424 |
| TspDTI | ATGAA | 2 cut(s) | 279, 305 |
| VpaK11BI | GGWCC | 2 cut(s) | 185, 365 |
| XapI | RAATTY | 1 cut(s) | 359 |
| XbaI | TCTAGA | 1 cut(s) | 239 |
| XceI | RCATGY | 1 cut(s) | 139 |
| XmnI | GAANNNNTTC | 1 cut(s) | 197 |
| XspI | CTAG | 1 cut(s) | 240 |
| ZrmI | AGTACT | 1 cut(s) | 343 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |