Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0000742

Physical Location & Seq

Genomic Coordinates Reverse (-)

44838913 .. 44846454

Gene Structure 7542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1368600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGCAAAAGCTAGGGTTTCCGAGCATGAGGAACTTGGATCAATTCAAGTCCCTCTCCAAATCGGTTTCAGGAGCTCCGAAGATATTCTCTTACTCTTCGCGTCCTCCAGATTCGATCGCTTCGGGAAGCTTCGCAAATTTGAAGCTCACTGCAGAGAAATTAGTGAAAGAGCAAGCTTCAGTGAAAACTGATCTCGAAATGGCGAACAATAAGCTGAAAAAATCAGTGGAGCATATTCACGCATTAGAGGAAAAATTGCAGAATGCTTTCAATGAAAATGCTAAGCTTAAGGTGAAGCAGAAGGAAGACGAAAAGATGTGGAAAGGATTGGAGTCTAAGTTTTCTTCAACGAAAACTCTGTGCGATCAACTGACGGAAACTTTGCAGCTTTTAGCTGGTCAGGTTCAGGATGCTGAGAAAGATAAAGAGTCCTTTGAATGCAAACTCTCTGCAAGTTCCATAGCTCTTGACGGTTTAAATCAGCAGATGGATGGTCTATCTCTAAAATTAGAGTCTGCAGAGGAACTTATAAGGAACCGTGAAAAGGAGCTTGAGGAACTCAAAATTGATAATGAAGAAAGGGATAGATCTTATCAAGATGAGCAAAGAAGAAATGAAAATCTCATAGAGGAAAAAGATGCCATGCTTAAGAACTTTGAGGCAACTCTAGCAACTAATAGGTTGGCTACAGAGAGTTTGAACTCTAAGTTGGGTGAGGTGCAGCTTGAGTTAAAGTTAAAAGAGGATGAAATTAAACGTTTGATAACTGCTCAGGAGAACTTGGAAATGGAAAAACACAATGTTCAGTTGAGCAACGATGACCTTGTTAAGAGATTAGATATCTCAGTCCTTGAGATAAGAAACCTTGAAGGGTTCGTTCATGTGTTGGCCGCACACCTGGCTGAATTGGATAAACAAAGTTTGGATTTTCTTGACAAGTTTGATAAGCTAAACTCTCTCTACGACACTTGCTTCAAGATGGTCCAGCAGGAGAGAGACCTTTCTGCCAAGCTTGCTCAGAGACAGTGTGATCAACTGCACGATGCATTTCTGAACATAACATCAGAAAAAGATGTTATACAATTGCTAAATCAGGAGTTGAACAATAAGGTCATCAAACTTCAGAAAGTTCAGGAGTCCGTTATGGCACAACTATCAGAGGAATGCCGTATAGCCAGAGAGAGGATAGAGAATTTGGAGTCTGAAGCAGAGATGCAGGTTTCAAAGAAGATTGAAACAGAGAAGGTGGTCTCCAAATTAGAACTGCAAATTCATTCTCTGTCAGAAAGTTTAAGATTGTCGGAGAATAAAATGCAAGATCTGTTGCTGAAAATGTCAGCTTTAGAAACTGAGAATAAAGATAATACAGAGAAATTACAAGCGGAGATACAGAAAAAAGATGAAGAAATAGACGGTCTACTAAAGGAAGGAGAAAAACATGAAGAGCAAGTAGATCTGATGGATAAACAATTCAACCAGCTCCAGAGCACGCTAGAGGAAAAGGAGCAACTTATTCTGGAATATAAGGAACGAGAGAAGAATCTCGAAGAACAGATTTCAGAGAACAAGGCATTGTTGACTGCTGCTGAAAGTAGACTTGTGGAAGATAAGAAGCAATATGATCTCATGCTAGAGAGTAAACAACTGGAATTATCAAGGCATTTGAAAGATATCTCTCAGAGGAATGATCAGGCAATTAATGACATCCGGAAGAAGTATGAGGTCGAGAAGCTGGAGATAGTTAACATGGAAAAGGAAAAGGCTGAAAAACTTGTTGGAGAAAGGGAGAAAGAATGTGAGAAAAAACTTGAAGAATGCAAAGAAGAATCGAGGCAGTACTTGATGCGCGTTCAGGAGGAACATGCTACTCTGGTCAGTCGCATTCAGCAGGAACATGATAGGAAGGAACTGAGTCTAAAATCTGAACACAGCGAAGAGCTAAAGCATTTCCGACTGCAAGCTGAAAACGAATTAAGAGAGAAAATAACTTCAATGAGGAGCGAACATGAAGCCGAGCTGAGAGGTTTGAGGCTTCAGCATGAAGATGAGTGTATAAAGCTGCAGGGTGAATTGGATCTTCAAAAGTCCAAAGAGGAGAAGCAGAGGGCATTACTGCAAATGCAGTGGAGAGTTATGGGTAATAAGCCACACGAGGACCAAGAAGTGAATTCAAAGAAGGATTACTCCATTTCGTCAAGGCAGATGAGAAACACGGCTAGTAGAAAAAGAAGTCAGCATTCTCTTGTAAGACCAGAGATCGATGAAAAGGAGTCACCTTTACTGGAAGTAACACAAACACCAGTGTCAAAGTTGTTGAAGAAAGTAGAGAACATAAACACTGGAAGTGTAATGAGTATTCCACAGAATCACAAAAAGGTAACTCATCGGGAGTATGAAGTTGAAACTAGTAATGGAAGAACAATCACGAAACGAAGGAAAACAAGAAGCACAGTAATGTTTGAAGATCCAACAAAACATAAAAGGACAAGAACACCAAAAGTTGCTACTCCCACGATTGTTGTTAAGGGATCTAAGGGAGGAGGTCAACCACATCCTTCAACCATTGGTGACTTGTTTTCAGAAGGGTCTCTAAATCCATATGCAGACGATCCCTATGCATTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0000802 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0051276 GO:0051321 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

876

Amino Acids

101.41

Weight (kDa)

5.61

Isoelectric Point (pI)

50.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22260 AT1G22260 AT1G22260 AT1G22275 AT1G22275 AT1G22275
fragaria_vesca	FvH4_5g32650 FvH4_5g32780 FvH4_5g37341 FvH4_5g37341 FvH4_5g37341 FvH4_5g37878 FvH4_5g39260 FvH4_5g39261 FvH4_6g40021
malus_domestica	MD15G1368600.v1.1
prunus_persica	Prupe.1G516800_v2.0.a1
pyrus_communis	pycom15g33040
rosa_chinensis	RchiOBHm_Chr0c28g0500891 RchiOBHm_Chr0c28g0500941 RchiOBHm_Chr0c28g0500951 RchiOBHm_Chr0c28g0501001 RchiOBHm_Chr0c28g0501031 RchiOBHm_Chr0c28g0501041 RchiOBHm_Chr2g0168611 RchiOBHm_Chr7g0227211 RchiOBHm_Chr7g0239001 RchiOBHm_Chr7g0240441 RchiOBHm_Chr7g0243501 RchiOBHm_Chr7g0243551 RchiOBHm_Chr7g0243591 RchiOBHm_Chr7g0243601 RchiOBHm_Chr7g0243631
rosa_laevigata	RLG00000000697 RLG00000000791 RLG00000001655 RLG00000012649 RLG00000029503 RLG00000029517
rosa_multiflora	Rmu_sc0000477.1_g000005 Rmu_sc0000808.1_g000048 Rmu_sc0001157.1_g000007 Rmu_sc0003467.1_g000028 Rmu_sc0004062.1_g000005 Rmu_sc0004062.1_g000012 Rmu_sc0004132.1_g000002 Rmu_sc0007030.1_g000007 Rmu_sc0007424.1_g000006
rosa_roxburghii	Rroxscaffold_3G00220080 Rroxscaffold_3G00221390 Rroxscaffold_3G00222050 Rroxscaffold_3G00222080
rosa_rugosa	Rorug04G0112400 Rorug04G0112500 Rorug04G0112500 Rorug05G0574800 Rorug07G0324400 Rorug07G0324800
rosa_samantha	Rh2CG397000 Rh5BG532300 Rh5BG532500 Rh5CG411900 Rh5CG556200 Rh7BG420900 Rh7BG452000 Rh7CG496600 Rh7CG496800 Rh7DG464100
rosa_wichuraiana	Rw2G046820 Rw5G047300 Rw7G039610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	530
Acc36I	ACCTGC	1 cut(s)	1207
AccI	GTMKAC	2 cut(s)	1417, 1594
AccII	CGCG	2 cut(s)	100, 1848
AccIII	TCCGGA	1 cut(s)	1707
AciI	CCGC	2 cut(s)	891, 1382
AclI	AACGTT	1 cut(s)	757
AclWI	GGATC	5 cut(s)	45, 2082, 2459, 2536, 2603
AcoI	YGGCCR	1 cut(s)	888
AcsI	RAATTY	4 cut(s)	136, 1192, 1269, 2167
AcuI	CTGAAG	4 cut(s)	162, 1106, 1224, 2018
AfaI	GTAC	1 cut(s)	1838
AfiI	CCNNNNNNNGG	2 cut(s)	544, 1182
AflII	CTTAAG	2 cut(s)	287, 647
AhlI	ACTAGT	1 cut(s)	2405
AjnI	CCWGG	1 cut(s)	897
AjuI	GAANNNNNNNTTGG	4 cut(s)	692, 724, 1758, 1790
Alw21I	GWGCWC	2 cut(s)	76, 1490
Alw26I	GTCTC	4 cut(s)	990, 1015, 1255, 2592
AlwI	GGATC	5 cut(s)	45, 2082, 2459, 2536, 2603
Aor13HI	TCCGGA	1 cut(s)	1707
AoxI	GGCC	1 cut(s)	888
ApeKI	GCWGC	4 cut(s)	385, 721, 1583, 2059
ApoI	RAATTY	4 cut(s)	136, 1192, 1269, 2167
ArsI	GACNNNNNNTTYG	2 cut(s)	364, 396
AseI	ATTAAT	1 cut(s)	1698
Asp700I	GAANNNNTTC	2 cut(s)	83, 266
AspLEI	GCGC	1 cut(s)	1848
AspS9I	GGNCC	2 cut(s)	982, 2155
AsuHPI	GGTGA	5 cut(s)	304, 725, 2078, 2265, 2579
AvaII	GGWCC	2 cut(s)	982, 2155
BanII	GRGCYC	1 cut(s)	76
BauI	CACGAG	1 cut(s)	2150
BbsI	GAAGAC	1 cut(s)	312
Bbv12I	GWGCWC	2 cut(s)	76, 1490
BbvI	GCAGC	4 cut(s)	397, 733, 1570, 2046
BccI	CCATC	4 cut(s)	481, 485, 973, 1453
BceAI	ACGGC	2 cut(s)	1152, 2229
BcgI	CGANNNNNNTGC	1 cut(s)	2597
BciT130I	CCWGG	1 cut(s)	899
BclI	TGATCA	2 cut(s)	1030, 1687
BcoDI	GTCTC	4 cut(s)	990, 1015, 1255, 2592
BcuI	ACTAGT	1 cut(s)	2405
BfaI	CTAG	6 cut(s)	11, 668, 1493, 1631, 2217, 2406
BfmI	CTRYAG	4 cut(s)	150, 516, 687, 2060
BfrI	CTTAAG	2 cut(s)	287, 647
BfuAI	ACCTGC	1 cut(s)	1207
BglII	AGATCT	3 cut(s)	587, 1318, 1453
BisI	GCNGC	5 cut(s)	386, 722, 891, 1584, 2060
BlpI	GCTNAGC	1 cut(s)	282
BlsI	GCNGC	5 cut(s)	387, 723, 892, 1585, 2061
BmcAI	AGTACT	1 cut(s)	1838
Bme1390I	CCNGG	1 cut(s)	899
Bme18I	GGWCC	2 cut(s)	982, 2155
BmgT120I	GGNCC	2 cut(s)	982, 2155
BmiI	GGNNCC	1 cut(s)	536
BmrFI	CCNGG	1 cut(s)	899
BmsI	GCATC	5 cut(s)	400, 628, 1033, 1203, 1833
BpiI	GAAGAC	1 cut(s)	312
BpmI	CTGGAG	3 cut(s)	90, 1466, 1754
Bpu10I	CCTNAGC	1 cut(s)	771
Bpu1102I	GCTNAGC	1 cut(s)	282
BpuEI	CTTGAG	3 cut(s)	572, 746, 872
Bsa29I	ATCGAT	1 cut(s)	2259
BsaI	GGTCTC	3 cut(s)	990, 1255, 2592
BsaWI	WCCGGW	1 cut(s)	1707
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	2 cut(s)	544, 1182
Bse1I	ACTGG	4 cut(s)	1650, 2286, 2300, 2344
BseAI	TCCGGA	1 cut(s)	1707
BseBI	CCWGG	1 cut(s)	899
BseCI	ATCGAT	1 cut(s)	2259
BseGI	GGATG	5 cut(s)	415, 496, 751, 1704, 2551
BseLI	CCNNNNNNNGG	2 cut(s)	544, 1182
BseMII	CTCAG	8 cut(s)	405, 785, 858, 1031, 1341, 1691, 1901, 2009
BseNI	ACTGG	4 cut(s)	1650, 2286, 2300, 2344
BseRI	GAGGAG	3 cut(s)	2011, 2108, 2553
BseXI	GCAGC	4 cut(s)	397, 733, 1570, 2046
BsgI	GTGCAG	2 cut(s)	740, 1022
Bsh1236I	CGCG	2 cut(s)	100, 1848
Bsh1285I	CGRYCG	1 cut(s)	117
BshFI	GGCC	1 cut(s)	890
BshVI	ATCGAT	1 cut(s)	2259
BsiEI	CGRYCG	1 cut(s)	117
BsiHKAI	GWGCWC	2 cut(s)	76, 1490
BsiSI	CCGG	1 cut(s)	1708
BslFI	GGGAC	1 cut(s)	34
BslI	CCNNNNNNNGG	2 cut(s)	544, 1182
BsmAI	GTCTC	4 cut(s)	990, 1015, 1255, 2592
BsmFI	GGGAC	1 cut(s)	34
BsmI	GAATGC	6 cut(s)	268, 443, 1169, 1820, 1881, 2236
BsnI	GGCC	1 cut(s)	890
Bso31I	GGTCTC	3 cut(s)	990, 1255, 2592
Bsp1286I	GDGCHC	2 cut(s)	76, 1490
Bsp13I	TCCGGA	1 cut(s)	1707
Bsp1720I	GCTNAGC	1 cut(s)	282
BspACI	CCGC	2 cut(s)	891, 1382
BspANI	GGCC	1 cut(s)	890
BspCNI	CTCAG	8 cut(s)	406, 784, 857, 1030, 1342, 1690, 1902, 2010
BspDI	ATCGAT	1 cut(s)	2259
BspEI	TCCGGA	1 cut(s)	1707
BspFNI	CGCG	2 cut(s)	100, 1848
BspLI	GGNNCC	1 cut(s)	536
BspMAI	CTGCAG	3 cut(s)	154, 520, 2064
BspMI	ACCTGC	1 cut(s)	1207
BspPI	GGATC	5 cut(s)	45, 2082, 2459, 2536, 2603
BspQI	GCTCTTC	2 cut(s)	1437, 1929
BspTI	CTTAAG	2 cut(s)	287, 647
BspTNI	GGTCTC	3 cut(s)	990, 1255, 2592
BsrI	ACTGG	4 cut(s)	1650, 2286, 2300, 2344
BssSI	CACGAG	1 cut(s)	2150
Bst2BI	CACGAG	1 cut(s)	2150
Bst2UI	CCWGG	1 cut(s)	899
Bst4CI	ACNGT	5 cut(s)	473, 539, 1026, 1415, 2452
Bst6I	CTCTTC	3 cut(s)	100, 1437, 1929
BstAFI	CTTAAG	2 cut(s)	287, 647
BstC8I	GCNNGC	4 cut(s)	174, 1014, 1490, 1959
BstF5I	GGATG	5 cut(s)	415, 496, 751, 1704, 2551
BstFNI	CGCG	2 cut(s)	100, 1848
BstHHI	GCGC	1 cut(s)	1848
BstMAI	GTCTC	4 cut(s)	990, 1015, 1255, 2592
BstMCI	CGRYCG	1 cut(s)	117
BstMWI	GCNNNNNNNGC	3 cut(s)	668, 899, 1013
BstNI	CCWGG	1 cut(s)	899
BstNSI	RCATGY	1 cut(s)	1865
BstSCI	CCNGG	1 cut(s)	897
BstSFI	CTRYAG	4 cut(s)	150, 516, 687, 2060
BstUI	CGCG	2 cut(s)	100, 1848
BstV1I	GCAGC	4 cut(s)	397, 733, 1570, 2046
BstV2I	GAAGAC	1 cut(s)	312
BstX2I	RGATCY	6 cut(s)	587, 1318, 1453, 2074, 2464, 2528
BstYI	RGATCY	6 cut(s)	587, 1318, 1453, 2074, 2464, 2528
Bsu15I	ATCGAT	1 cut(s)	2259
BsuRI	GGCC	1 cut(s)	890
BsuTUI	ATCGAT	1 cut(s)	2259
BtsCI	GGATG	5 cut(s)	415, 496, 751, 1704, 2551
BtsI	GCAGTG	2 cut(s)	147, 2129
BtsIMutI	CAGTG	7 cut(s)	147, 186, 231, 1031, 2129, 2307, 2337
BveI	ACCTGC	1 cut(s)	1207
Cac8I	GCNNGC	4 cut(s)	174, 1014, 1490, 1959
CfoI	GCGC	1 cut(s)	1848
Cfr13I	GGNCC	2 cut(s)	982, 2155
ClaI	ATCGAT	1 cut(s)	2259
CseI	GACGC	1 cut(s)	89
Csp6I	GTAC	1 cut(s)	1837
CspCI	CAANNNNNGTGG	4 cut(s)	2105, 2140, 2500, 2535
CviQI	GTAC	1 cut(s)	1837
DraI	TTTAAA	1 cut(s)	477
EaeI	YGGCCR	1 cut(s)	888
Eam1104I	CTCTTC	3 cut(s)	100, 1437, 1929
EarI	CTCTTC	3 cut(s)	100, 1437, 1929
Ecl136II	GAGCTC	1 cut(s)	74
Eco24I	GRGCYC	1 cut(s)	76
Eco31I	GGTCTC	3 cut(s)	990, 1255, 2592
Eco32I	GATATC	2 cut(s)	841, 1672
Eco47I	GGWCC	2 cut(s)	982, 2155
Eco53kI	GAGCTC	1 cut(s)	74
Eco57I	CTGAAG	4 cut(s)	162, 1106, 1224, 2018
EcoICRI	GAGCTC	1 cut(s)	74
EcoRI	GAATTC	1 cut(s)	2167
EcoRII	CCWGG	1 cut(s)	897
EcoRV	GATATC	2 cut(s)	841, 1672
EcoT22I	ATGCAT	2 cut(s)	1048, 2620
EcoT38I	GRGCYC	1 cut(s)	76
FaqI	GGGAC	1 cut(s)	34
FauNDI	CATATG	1 cut(s)	2599
FbaI	TGATCA	2 cut(s)	1030, 1687
FblI	GTMKAC	2 cut(s)	1417, 1594
Fnu4HI	GCNGC	5 cut(s)	386, 722, 891, 1584, 2060
FokI	GGATG	5 cut(s)	422, 503, 758, 1691, 2538
FriOI	GRGCYC	1 cut(s)	76
Fsp4HI	GCNGC	5 cut(s)	386, 722, 891, 1584, 2060
FspBI	CTAG	6 cut(s)	11, 668, 1493, 1631, 2217, 2406
GlaI	GCGC	1 cut(s)	1847
GluI	GCNGC	5 cut(s)	386, 722, 891, 1584, 2060
GsuI	CTGGAG	3 cut(s)	90, 1466, 1754
HaeIII	GGCC	1 cut(s)	890
HapII	CCGG	1 cut(s)	1708
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	1 cut(s)	1848
Hin6I	GCGC	1 cut(s)	1846
HinP1I	GCGC	1 cut(s)	1846
HincII	GTYRAC	3 cut(s)	1578, 1744, 2546
HindII	GTYRAC	3 cut(s)	1578, 1744, 2546
HindIII	AAGCTT	4 cut(s)	127, 174, 284, 1010
HpaI	GTTAAC	1 cut(s)	1744
HpaII	CCGG	1 cut(s)	1708
HphI	GGTGA	5 cut(s)	304, 725, 2078, 2265, 2579
Hpy166II	GTNNAC	6 cut(s)	1418, 1578, 1595, 1640, 1744, 2546
Hpy8I	GTNNAC	6 cut(s)	1418, 1578, 1595, 1640, 1744, 2546
HpyAV	CCTTC	9 cut(s)	295, 863, 1237, 1421, 1897, 2170, 2427, 2565, 2576
HpyCH4III	ACNGT	5 cut(s)	473, 539, 1026, 1415, 2452
HpyCH4IV	ACGT	1 cut(s)	757
HpyF10VI	GCNNNNNNNGC	3 cut(s)	668, 899, 1013
HpySE526I	ACGT	1 cut(s)	757
HspAI	GCGC	1 cut(s)	1846
Kpn2I	TCCGGA	1 cut(s)	1707
Ksp22I	TGATCA	2 cut(s)	1030, 1687
KspAI	GTTAAC	1 cut(s)	1744
LguI	GCTCTTC	2 cut(s)	1437, 1929
LmnI	GCTCC	7 cut(s)	71, 79, 229, 547, 1485, 1504, 1998
Lsp1109I	GCAGC	4 cut(s)	397, 733, 1570, 2046
LweI	GCATC	5 cut(s)	400, 628, 1033, 1203, 1833
MaeI	CTAG	6 cut(s)	11, 668, 1493, 1631, 2217, 2406
MaeII	ACGT	1 cut(s)	757
MaeIII	GTNAC	4 cut(s)	2271, 2287, 2377, 2567
MfeI	CAATTG	1 cut(s)	1082
MflI	RGATCY	6 cut(s)	587, 1318, 1453, 2074, 2464, 2528
MhlI	GDGCHC	2 cut(s)	76, 1490
MlyI	GAGTC	7 cut(s)	341, 437, 521, 1145, 1208, 1921, 2279
MmeI	TCCRAC	4 cut(s)	1281, 1756, 1975, 2492
Mph1103I	ATGCAT	2 cut(s)	1048, 2620
MroI	TCCGGA	1 cut(s)	1707
MroXI	GAANNNNTTC	2 cut(s)	83, 266
MslI	CAYNNNNRTG	2 cut(s)	2043, 2453
MspCI	CTTAAG	2 cut(s)	287, 647
MspI	CCGG	1 cut(s)	1708
MspR9I	CCNGG	1 cut(s)	899
MunI	CAATTG	1 cut(s)	1082
Mva1269I	GAATGC	6 cut(s)	268, 443, 1169, 1820, 1881, 2236
MvaI	CCWGG	1 cut(s)	899
MvnI	CGCG	2 cut(s)	100, 1848
MwoI	GCNNNNNNNGC	3 cut(s)	668, 899, 1013
NdeI	CATATG	1 cut(s)	2599
NlaIV	GGNNCC	1 cut(s)	536
NmeAIII	GCCGAG	1 cut(s)	2038
NmuCI	GTSAC	2 cut(s)	2271, 2567
NsiI	ATGCAT	2 cut(s)	1048, 2620
NspI	RCATGY	1 cut(s)	1865
PciSI	GCTCTTC	2 cut(s)	1437, 1929
PctI	GAATGC	6 cut(s)	268, 443, 1169, 1820, 1881, 2236
PdmI	GAANNNNTTC	2 cut(s)	83, 266
PfeI	GAWTC	4 cut(s)	110, 1540, 1826, 2365
PkrI	GCNGC	5 cut(s)	387, 723, 892, 1585, 2061
Ple19I	CGATCG	1 cut(s)	117
PleI	GAGTC	7 cut(s)	340, 436, 520, 1144, 1207, 1920, 2278
PpsI	GAGTC	7 cut(s)	340, 436, 520, 1144, 1207, 1920, 2278
PshBI	ATTAAT	1 cut(s)	1698
PsiI	TTATAA	1 cut(s)	530
Psp124BI	GAGCTC	1 cut(s)	76
Psp1406I	AACGTT	1 cut(s)	757
Psp6I	CCWGG	1 cut(s)	897
PspGI	CCWGG	1 cut(s)	897
PspN4I	GGNNCC	1 cut(s)	536
PspPI	GGNCC	2 cut(s)	982, 2155
PstI	CTGCAG	3 cut(s)	154, 520, 2064
PsuI	RGATCY	6 cut(s)	587, 1318, 1453, 2074, 2464, 2528
PvuI	CGATCG	1 cut(s)	117
RsaI	GTAC	1 cut(s)	1838
RsaNI	GTAC	1 cut(s)	1837
RseI	CAYNNNNRTG	2 cut(s)	2043, 2453
SacI	GAGCTC	1 cut(s)	76
SapI	GCTCTTC	2 cut(s)	1437, 1929
SatI	GCNGC	5 cut(s)	386, 722, 891, 1584, 2060
Sau96I	GGNCC	2 cut(s)	982, 2155
ScaI	AGTACT	1 cut(s)	1838
SchI	GAGTC	7 cut(s)	341, 437, 521, 1145, 1208, 1921, 2279
ScrFI	CCNGG	1 cut(s)	899
SduI	GDGCHC	2 cut(s)	76, 1490
SfaNI	GCATC	5 cut(s)	400, 628, 1033, 1203, 1833
SfcI	CTRYAG	4 cut(s)	150, 516, 687, 2060
SinI	GGWCC	2 cut(s)	982, 2155
SmiMI	CAYNNNNRTG	2 cut(s)	2043, 2453
SmlI	CTYRAG	5 cut(s)	287, 551, 647, 725, 851
SmoI	CTYRAG	5 cut(s)	287, 551, 647, 725, 851
SpeI	ACTAGT	1 cut(s)	2405
SsiI	CCGC	2 cut(s)	891, 1382
SspMI	CTAG	6 cut(s)	11, 668, 1493, 1631, 2217, 2406
SstI	GAGCTC	1 cut(s)	76
StyD4I	CCNGG	1 cut(s)	897
TaaI	ACNGT	5 cut(s)	473, 539, 1026, 1415, 2452
TaiI	ACGT	1 cut(s)	760
TaqI	TCGA	6 cut(s)	113, 195, 1545, 1725, 1829, 2259
TatI	WGTACW	1 cut(s)	1836
TauI	GCSGC	1 cut(s)	893
TfiI	GAWTC	4 cut(s)	110, 1540, 1826, 2365
TscAI	CASTG	7 cut(s)	154, 186, 231, 1031, 2129, 2307, 2344
TseFI	GTSAC	2 cut(s)	2271, 2567
TseI	GCWGC	4 cut(s)	385, 721, 1583, 2059
Tsp45I	GTSAC	2 cut(s)	2271, 2567
TspGWI	ACGGA	2 cut(s)	389, 1129
TspRI	CASTG	7 cut(s)	154, 186, 231, 1031, 2129, 2307, 2344
Vha464I	CTTAAG	2 cut(s)	287, 647
VpaK11BI	GGWCC	2 cut(s)	982, 2155
VspI	ATTAAT	1 cut(s)	1698
XapI	RAATTY	4 cut(s)	136, 1192, 1269, 2167
XceI	RCATGY	1 cut(s)	1865
XmiI	GTMKAC	2 cut(s)	1417, 1594
XmnI	GAANNNNTTC	2 cut(s)	83, 266
XspI	CTAG	6 cut(s)	11, 668, 1493, 1631, 2217, 2406
ZrmI	AGTACT	1 cut(s)	1838
Zsp2I	ATGCAT	2 cut(s)	1048, 2620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.