Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0000742

Physical Location & Seq

Genomic Coordinates Forward (+)

53073251 .. 53080257

Gene Structure 7007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG452000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGCAGAAGCTAGGGTTTTCGAGCATGAGGAGCTTGGATCAGTTCAAGTCCCTCTCGAAATCGGTCTCGGGAGGACCTCCGAAGACCTTCGCCCACTCTTCGCGTCCGCCGGAGTCGACCTCGTCCGGAAGCTTCGCGAACTTGAAGCTCACCGCAGAGAAATTAGTGAAAGAGCAAGCTTCTGTGAAAACAGATCTGGAAATGGCGAACACTAAGCTGAAAAAATCAATGGAGCACATCCGTGCATTAGAGGAAAAATTGCAGAATGCTTTCAATGAAAATGCTAAGTTTAAAGTGAAGCAGAAGGAAGATGAAAAGCTGTGGAAGGGATTAGAGTCTAAGTTTTCTTCAACTAAAACATTGTGTGACCAACTCACAGAAACTTTACAGCTCTTAGCTGGTCAAGTTCAGGATGCTGAAAAAGATAAGGAGTCCTTTGAAGGCAAACTCTCTGCGAGTGCAGTAGCTCTTGACGGTTTGAGTCAACAAATGAATGATCTGTCTATAAAGCTAGAGTCAGCAGAGAAAACTATAAGGAATCGTGAAAAGGAGCTGGAGAAACGCAGACTCGAGAAAGAGGAGACAGATAAACTTTACAGAAATGAACAGTCCAGAACTGCAAATCTTATAGAGGAAAAAGATTCTATGATTAAGAACTTTGAAGAAACTCTAGCAACTAATAGGTTGGCTACAGAGAGTTTGAACACTAAATTGGGTGAGGTGCATCTTGAGTTGAAGTTAAAAGAGGATGAAATCAGACGTTTGATAACTGCTCAGGAGAAGTTGGAAACAGAAAAGCATGATCTTCATCTAAGCAACGATGACCTTGTTAAGAGATTAGAGATGTCAGTCCTTGAGATAAAGAACCTTGAAAGTTTTGTTCATGTGTTGGCTGCACATTTGGCTGAATTGGATAAACAAAGTTTGAACTTTCTAGAAAAGTTCGATAAGCTAAACGCTCTCTATGAGGCGTGCTTCCAGTTAGTCAATCAGGAGAGAGATCTTTCTGCCAAGCTTGCTCAGAGACAGTATGATCAACTGCACGACAGGTTCTTGAACTTAACATCAGAAAAAGATGCTATACAATTGGTAAATCAGGAGTTGAACAATAAGGTCATGGAACTTCAGAAAATTCAGGAGTCTATTATGGCACAACTTTCGGAGGAAAGCTGTACAGCCAGAGAGAGGATACAGAAGTTGGAGTTTGAAACTGAAGCTCTGGTCTCAAAGAAGATTGAAACTGAGAAGTTGGTGTCTGAACTAGAACTGCAAATTGATTCTCTGTCAGAAAGTTCAAGATCATCTGAGAATAAAATGCAAAATCTGTTGCTGAAAATCTCAGCACTAGAAACTGAGAATAAAGATAATACAGAGAAACTACAAGCAGAGATACAGAGGAAAGTGGAACAAATAGATGGTTTACTGAAGGAAGGTGAAACACATGAGCAGCATGTAGATTTGATGGATAAGCAAGTCAGCCAGCTTCATAGCACACTAGAGGAAAAGGAGCAACTTATTGTGCAATATAAGGAACGAGAGAAGAATCTGGAAGAACAGATCACAGAGAATCGTGCATCCCTGACTGCTGCTGAAACTAGACTTGTGGAAGATAAGAAGCAATATGACCTCATGCTTGAGAGTAAACAACTAGAACTGTCAAGGCACTTGAAAGACATATCACAGAGGAATGATCAGGCAATTAATGACATCCGGAAGAAGTATGAGGTGGAGAAGCTGGAGATAGTTAACATGGAAAAGCAAAAGGCAGAAAATCTTGTTCGAGACAGGGAGATAGAATATGAGAAAAAACTTGAAGAATGCAAAGAAGAATCTAGGCAGCAATTGATGCATGTTCAGGAGGAACATGCTGCGCTGGTCAGTAGTCTTCAGCAGGAACATGATAAAAAGGAACGAAATTTAAAAGCTAAACACAGTGAAGGGCTAAAGCAGATCCAACTTCAAGCTGAAAATGAGTTGAGAGAGAAATTAACATCAATGAGGAATGAACATGAAGCCCAACTGAGAGCTTTGAGGCTTCAGCATGAAGATGAGATTAAGAAGCTTCAGGAGGACTTGGATCTTCAAAAGTCCAAAGAGGAGAGGCAGAGGGCATTACTGCAATTGCAGTGGAAAGTTATGAGCGACAAGCCAGAGGAGCAAGAAGTGAATTCGAAGAAGGAATACTCAATTCCGATGAGGAGAAACCCTGTTGTGAGAAGGAGAGGTCAGCGCTCTCTGAGAAGACAGGAGCATGATGAAAAGGATTCACCTCTAGTGGGAGCAACACAAACACCAGTGTCAACACTGTTGAAGAAAGCTTCAGAGAATATGAATTCACCAAGTGTAACGAATATTTCAAATCAGCATAAAAAGGTGATTCGGGACGAATATGAAGTTGAAACTGGTAATGGAAGTACTATTAAAAGGAAATCAAGAAGCACAGTCATGTTTGAGGATCCAAGAAAACATAAGAGGACAAGTACACCAAAAGTCAAAAGCCCCAGGAGTGTAGTCAAAGGATCTAAGGGAGAGGGTCAACCACGTCCTTCAAACATCGGTGACCTGTTTTCAGAAGGGTCTCTGAATCCATATGCTGATGATCCATATGCATTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0000802 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0051276 GO:0051321 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

872

Amino Acids

100.97

Weight (kDa)

6.0

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22260 AT1G22260 AT1G22260 AT1G22275 AT1G22275 AT1G22275
fragaria_vesca	FvH4_5g32650 FvH4_5g32780 FvH4_5g37341 FvH4_5g37341 FvH4_5g37341 FvH4_5g37878 FvH4_5g39260 FvH4_5g39261 FvH4_6g40021
malus_domestica	MD15G1368600.v1.1
prunus_persica	Prupe.1G516800_v2.0.a1
pyrus_communis	pycom15g33040
rosa_chinensis	RchiOBHm_Chr0c28g0500891 RchiOBHm_Chr0c28g0500941 RchiOBHm_Chr0c28g0500951 RchiOBHm_Chr0c28g0501001 RchiOBHm_Chr0c28g0501031 RchiOBHm_Chr0c28g0501041 RchiOBHm_Chr2g0168611 RchiOBHm_Chr7g0227211 RchiOBHm_Chr7g0239001 RchiOBHm_Chr7g0240441 RchiOBHm_Chr7g0243501 RchiOBHm_Chr7g0243551 RchiOBHm_Chr7g0243591 RchiOBHm_Chr7g0243601 RchiOBHm_Chr7g0243631
rosa_laevigata	RLG00000000697 RLG00000000791 RLG00000001655 RLG00000012649 RLG00000029503 RLG00000029517
rosa_multiflora	Rmu_sc0000477.1_g000005 Rmu_sc0000808.1_g000048 Rmu_sc0001157.1_g000007 Rmu_sc0003467.1_g000028 Rmu_sc0004062.1_g000005 Rmu_sc0004062.1_g000012 Rmu_sc0004132.1_g000002 Rmu_sc0007030.1_g000007 Rmu_sc0007424.1_g000006
rosa_roxburghii	Rroxscaffold_3G00220080 Rroxscaffold_3G00221390 Rroxscaffold_3G00222050 Rroxscaffold_3G00222080
rosa_rugosa	Rorug04G0112400 Rorug04G0112500 Rorug04G0112500 Rorug05G0574800 Rorug07G0324400 Rorug07G0324800
rosa_samantha	Rh2CG397000 Rh5BG532300 Rh5BG532500 Rh5CG411900 Rh5CG556200 Rh7BG420900 Rh7BG452000 Rh7CG496600 Rh7CG496800 Rh7DG464100
rosa_wichuraiana	Rw2G046820 Rw5G047300 Rw7G039610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	116
AccII	CGCG	2 cut(s)	103, 137
AccIII	TCCGGA	2 cut(s)	125, 1710
AciI	CCGC	2 cut(s)	107, 153
AclWI	GGATC	7 cut(s)	45, 1945, 2085, 2450, 2463, 2527, 2594
AcsI	RAATTY	4 cut(s)	1131, 1915, 2167, 2332
AcuI	CTGAAG	7 cut(s)	1109, 1233, 1445, 1871, 2021, 2048, 2304
AdeI	CACNNNGTG	1 cut(s)	2342
AfaI	GTAC	3 cut(s)	1174, 2416, 2482
AfeI	AGCGCT	1 cut(s)	2231
AfiI	CCNNNNNNNGG	2 cut(s)	1185, 2276
AjiI	CACGTC	1 cut(s)	2543
AjnI	CCWGG	1 cut(s)	2501
AjuI	GAANNNNNNNTTGG	2 cut(s)	695, 727
AleI	CACNNNNGTG	1 cut(s)	240
Alw21I	GWGCWC	1 cut(s)	237
Alw26I	GTCTC	6 cut(s)	70, 575, 1018, 1228, 1776, 2583
AlwI	GGATC	7 cut(s)	45, 1945, 2085, 2450, 2463, 2527, 2594
Ama87I	CYCGRG	2 cut(s)	67, 569
Aor13HI	TCCGGA	2 cut(s)	125, 1710
Aor51HI	AGCGCT	1 cut(s)	2231
ApeKI	GCWGC	5 cut(s)	893, 1447, 1586, 1837, 1868
ApoI	RAATTY	4 cut(s)	1131, 1915, 2167, 2332
AseI	ATTAAT	1 cut(s)	1701
Asp700I	GAANNNNTTC	2 cut(s)	86, 269
AspLEI	GCGC	2 cut(s)	1873, 2232
AspS9I	GGNCC	1 cut(s)	74
AsuHPI	GGTGA	7 cut(s)	142, 728, 1445, 2259, 2328, 2386, 2570
AsuII	TTCGAA	1 cut(s)	2171
AvaI	CYCGRG	2 cut(s)	67, 569
AvaII	GGWCC	1 cut(s)	74
BaeI	ACNNNNGTAYC	2 cut(s)	1181, 1214
BamHI	GGATCC	1 cut(s)	2455
BarI	GAAGNNNNNNTAC	2 cut(s)	2165, 2197
BbsI	GAAGAC	3 cut(s)	89, 1877, 2248
Bbv12I	GWGCWC	1 cut(s)	237
BbvI	GCAGC	5 cut(s)	880, 1459, 1573, 1849, 1855
BccI	CCATC	2 cut(s)	1409, 1456
BcgI	CGANNNNNNTGC	2 cut(s)	1140, 1174
BciT130I	CCWGG	1 cut(s)	2503
BciVI	GTATCC	1 cut(s)	1182
BclI	TGATCA	2 cut(s)	1033, 1690
BcoDI	GTCTC	6 cut(s)	70, 575, 1018, 1228, 1776, 2583
BfmI	CTRYAG	1 cut(s)	690
BfoI	RGCGCY	1 cut(s)	2233
BfuI	GTATCC	1 cut(s)	1182
BglII	AGATCT	2 cut(s)	193, 1000
BisI	GCNGC	5 cut(s)	894, 1448, 1587, 1838, 1869
BlsI	GCNGC	5 cut(s)	895, 1449, 1588, 1839, 1870
BmcAI	AGTACT	1 cut(s)	2416
Bme1390I	CCNGG	1 cut(s)	2503
Bme18I	GGWCC	1 cut(s)	74
BmeT110I	CYCGRG	2 cut(s)	67, 569
BmgBI	CACGTC	1 cut(s)	2543
BmgT120I	GGNCC	1 cut(s)	74
BmiI	GGNNCC	1 cut(s)	2457
BmrFI	CCNGG	1 cut(s)	2503
BmsI	GCATC	5 cut(s)	403, 733, 1066, 1583, 1836
BpiI	GAAGAC	3 cut(s)	89, 1877, 2248
BplI	GAGNNNNNCTC	2 cut(s)	104, 136
BpmI	CTGGAG	2 cut(s)	575, 1757
Bpu10I	CCTNAGC	1 cut(s)	774
Bpu14I	TTCGAA	1 cut(s)	2171
BpuEI	CTTGAG	3 cut(s)	749, 875, 1655
BsaBI	GATNNNNATC	1 cut(s)	807
BsaI	GGTCTC	3 cut(s)	70, 1228, 2583
BsaJI	CCNNGG	1 cut(s)	2501
BsaWI	WCCGGW	2 cut(s)	125, 1710
Bsc4I	CCNNNNNNNGG	2 cut(s)	1185, 2276
Bse1I	ACTGG	3 cut(s)	979, 2294, 2407
Bse8I	GATNNNNATC	1 cut(s)	807
BseAI	TCCGGA	2 cut(s)	125, 1710
BseBI	CCWGG	1 cut(s)	2503
BseDI	CCNNGG	1 cut(s)	2501
BseGI	GGATG	5 cut(s)	237, 418, 754, 1574, 1707
BseJI	GATNNNNATC	1 cut(s)	807
BseLI	CCNNNNNNNGG	2 cut(s)	1185, 2276
BseMII	CTCAG	8 cut(s)	788, 1034, 1233, 1296, 1344, 1353, 2012, 2228
BseNI	ACTGG	3 cut(s)	979, 2294, 2407
BseRI	GAGGAG	5 cut(s)	43, 593, 2111, 2168, 2212
BseXI	GCAGC	5 cut(s)	880, 1459, 1573, 1849, 1855
BsgI	GTGCAG	3 cut(s)	480, 879, 1025
Bsh1236I	CGCG	2 cut(s)	103, 137
BsiHKAI	GWGCWC	1 cut(s)	237
BsiHKCI	CYCGRG	2 cut(s)	67, 569
BsiSI	CCGG	3 cut(s)	110, 126, 1711
BslFI	GGGAC	2 cut(s)	34, 2396
BslI	CCNNNNNNNGG	2 cut(s)	1185, 2276
BsmAI	GTCTC	6 cut(s)	70, 575, 1018, 1228, 1776, 2583
BsmFI	GGGAC	2 cut(s)	34, 2396
BsmI	GAATGC	2 cut(s)	271, 1823
Bso31I	GGTCTC	3 cut(s)	70, 1228, 2583
BsoBI	CYCGRG	2 cut(s)	67, 569
Bsp119I	TTCGAA	1 cut(s)	2171
Bsp1286I	GDGCHC	1 cut(s)	237
Bsp13I	TCCGGA	2 cut(s)	125, 1710
Bsp1407I	TGTACA	1 cut(s)	1172
Bsp68I	TCGCGA	1 cut(s)	137
BspACI	CCGC	2 cut(s)	107, 153
BspCNI	CTCAG	8 cut(s)	787, 1033, 1234, 1297, 1345, 1352, 2013, 2229
BspEI	TCCGGA	2 cut(s)	125, 1710
BspFNI	CGCG	2 cut(s)	103, 137
BspLI	GGNNCC	1 cut(s)	2457
BspPI	GGATC	7 cut(s)	45, 1945, 2085, 2450, 2463, 2527, 2594
BspT104I	TTCGAA	1 cut(s)	2171
BspTNI	GGTCTC	3 cut(s)	70, 1228, 2583
BsrGI	TGTACA	1 cut(s)	1172
BsrI	ACTGG	3 cut(s)	979, 2294, 2407
BssECI	CCNNGG	1 cut(s)	2501
Bst2UI	CCWGG	1 cut(s)	2503
Bst4CI	ACNGT	7 cut(s)	476, 609, 1029, 1656, 1934, 2307, 2443
Bst6I	CTCTTC	1 cut(s)	103
BstAPI	GCANNNNNTGC	1 cut(s)	1846
BstAUI	TGTACA	1 cut(s)	1172
BstBI	TTCGAA	1 cut(s)	2171
BstC8I	GCNNGC	4 cut(s)	177, 973, 1017, 1481
BstEII	GGTNACC	1 cut(s)	2558
BstF5I	GGATG	5 cut(s)	237, 418, 754, 1574, 1707
BstFNI	CGCG	2 cut(s)	103, 137
BstH2I	RGCGCY	1 cut(s)	2233
BstHHI	GCGC	2 cut(s)	1873, 2232
BstMAI	GTCTC	6 cut(s)	70, 575, 1018, 1228, 1776, 2583
BstMWI	GCNNNNNNNGC	5 cut(s)	30, 902, 1016, 1846, 2155
BstNI	CCWGG	1 cut(s)	2503
BstNSI	RCATGY	3 cut(s)	1454, 1853, 1868
BstPI	GGTNACC	1 cut(s)	2558
BstSCI	CCNGG	1 cut(s)	2501
BstSFI	CTRYAG	1 cut(s)	690
BstUI	CGCG	2 cut(s)	103, 137
BstV1I	GCAGC	5 cut(s)	880, 1459, 1573, 1849, 1855
BstV2I	GAAGAC	3 cut(s)	89, 1877, 2248
BstX2I	RGATCY	6 cut(s)	193, 1000, 1950, 2077, 2455, 2519
BstYI	RGATCY	6 cut(s)	193, 1000, 1950, 2077, 2455, 2519
BsuI	GTATCC	1 cut(s)	1182
BtrI	CACGTC	1 cut(s)	2543
BtsCI	GGATG	5 cut(s)	237, 418, 754, 1574, 1707
BtsI	GCAGTG	1 cut(s)	2132
BtsIMutI	CAGTG	4 cut(s)	1939, 2132, 2301, 2303
BtuMI	TCGCGA	1 cut(s)	137
Cac8I	GCNNGC	4 cut(s)	177, 973, 1017, 1481
CfoI	GCGC	2 cut(s)	1873, 2232
Cfr13I	GGNCC	1 cut(s)	74
CseI	GACGC	1 cut(s)	92
Csp6I	GTAC	3 cut(s)	1173, 2415, 2481
CspCI	CAANNNNNGTGG	2 cut(s)	2108, 2143
CviQI	GTAC	3 cut(s)	1173, 2415, 2481
DraI	TTTAAA	2 cut(s)	292, 1920
DraIII	CACNNNGTG	1 cut(s)	2342
Eam1104I	CTCTTC	1 cut(s)	103
EarI	CTCTTC	1 cut(s)	103
EciI	GGCGGA	1 cut(s)	96
Eco31I	GGTCTC	3 cut(s)	70, 1228, 2583
Eco47I	GGWCC	1 cut(s)	74
Eco47III	AGCGCT	1 cut(s)	2231
Eco57I	CTGAAG	7 cut(s)	1109, 1233, 1445, 1871, 2021, 2048, 2304
Eco88I	CYCGRG	2 cut(s)	67, 569
Eco91I	GGTNACC	1 cut(s)	2558
EcoO109I	RGGNCCY	1 cut(s)	74
EcoO65I	GGTNACC	1 cut(s)	2558
EcoRI	GAATTC	2 cut(s)	2167, 2332
EcoRII	CCWGG	1 cut(s)	2501
EcoT22I	ATGCAT	2 cut(s)	1851, 2611
FalI	AAGNNNNNCTT	2 cut(s)	419, 451
FaqI	GGGAC	2 cut(s)	34, 2396
FauNDI	CATATG	2 cut(s)	2590, 2605
FbaI	TGATCA	2 cut(s)	1033, 1690
FblI	GTMKAC	1 cut(s)	116
Fnu4HI	GCNGC	5 cut(s)	894, 1448, 1587, 1838, 1869
FokI	GGATG	5 cut(s)	224, 425, 761, 1561, 1694
Fsp4HI	GCNGC	5 cut(s)	894, 1448, 1587, 1838, 1869
GlaI	GCGC	2 cut(s)	1872, 2231
GluI	GCNGC	5 cut(s)	894, 1448, 1587, 1838, 1869
GsuI	CTGGAG	2 cut(s)	575, 1757
HaeII	RGCGCY	1 cut(s)	2233
HapII	CCGG	3 cut(s)	110, 126, 1711
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	2 cut(s)	1873, 2232
Hin6I	GCGC	2 cut(s)	1871, 2230
HinP1I	GCGC	2 cut(s)	1871, 2230
HincII	GTYRAC	5 cut(s)	117, 485, 1747, 2301, 2537
HindII	GTYRAC	5 cut(s)	117, 485, 1747, 2301, 2537
HindIII	AAGCTT	5 cut(s)	130, 177, 1013, 2060, 2316
HpaI	GTTAAC	1 cut(s)	1747
HpaII	CCGG	3 cut(s)	110, 126, 1711
HphI	GGTGA	7 cut(s)	142, 728, 1445, 2259, 2328, 2386, 2570
Hpy166II	GTNNAC	8 cut(s)	117, 485, 1421, 1643, 1747, 2301, 2483, 2537
Hpy8I	GTNNAC	8 cut(s)	117, 485, 1421, 1643, 1747, 2301, 2483, 2537
HpyCH4III	ACNGT	7 cut(s)	476, 609, 1029, 1656, 1934, 2307, 2443
HpyCH4IV	ACGT	2 cut(s)	760, 2542
HpyF10VI	GCNNNNNNNGC	5 cut(s)	30, 902, 1016, 1846, 2155
HpySE526I	ACGT	2 cut(s)	760, 2542
HspAI	GCGC	2 cut(s)	1871, 2230
Kpn2I	TCCGGA	2 cut(s)	125, 1710
Ksp22I	TGATCA	2 cut(s)	1033, 1690
KspAI	GTTAAC	1 cut(s)	1747
LmnI	GCTCC	7 cut(s)	30, 232, 550, 1507, 2155, 2248, 2279
Lsp1109I	GCAGC	5 cut(s)	880, 1459, 1573, 1849, 1855
LweI	GCATC	5 cut(s)	403, 733, 1066, 1583, 1836
MaeII	ACGT	2 cut(s)	760, 2542
MaeIII	GTNAC	3 cut(s)	365, 2344, 2558
MfeI	CAATTG	3 cut(s)	1085, 1841, 2120
MflI	RGATCY	6 cut(s)	193, 1000, 1950, 2077, 2455, 2519
MhlI	GDGCHC	1 cut(s)	237
MlyI	GAGTC	7 cut(s)	122, 344, 440, 490, 524, 561, 1148
MmeI	TCCRAC	3 cut(s)	765, 1179, 1978
Mph1103I	ATGCAT	2 cut(s)	1851, 2611
MroI	TCCGGA	2 cut(s)	125, 1710
MroXI	GAANNNNTTC	2 cut(s)	86, 269
MslI	CAYNNNNRTG	3 cut(s)	240, 2046, 2444
MspI	CCGG	3 cut(s)	110, 126, 1711
MspR9I	CCNGG	1 cut(s)	2503
MunI	CAATTG	3 cut(s)	1085, 1841, 2120
Mva1269I	GAATGC	2 cut(s)	271, 1823
MvaI	CCWGG	1 cut(s)	2503
MvnI	CGCG	2 cut(s)	103, 137
MwoI	GCNNNNNNNGC	5 cut(s)	30, 902, 1016, 1846, 2155
NdeI	CATATG	2 cut(s)	2590, 2605
NlaIV	GGNNCC	1 cut(s)	2457
NmuCI	GTSAC	2 cut(s)	365, 2558
NruI	TCGCGA	1 cut(s)	137
NsiI	ATGCAT	2 cut(s)	1851, 2611
NspI	RCATGY	3 cut(s)	1454, 1853, 1868
NspV	TTCGAA	1 cut(s)	2171
OliI	CACNNNNGTG	1 cut(s)	240
PaeR7I	CTCGAG	1 cut(s)	569
PctI	GAATGC	2 cut(s)	271, 1823
PdmI	GAANNNNTTC	2 cut(s)	86, 269
PfeI	GAWTC	9 cut(s)	538, 641, 1277, 1543, 1567, 1829, 2264, 2377, 2584
PflFI	GACNNNGTC	1 cut(s)	121
PkrI	GCNGC	5 cut(s)	895, 1449, 1588, 1839, 1870
PleI	GAGTC	7 cut(s)	121, 343, 439, 489, 523, 561, 1147
PpsI	GAGTC	7 cut(s)	121, 343, 439, 489, 523, 561, 1147
PpuMI	RGGWCCY	1 cut(s)	74
PshBI	ATTAAT	1 cut(s)	1701
Psp5II	RGGWCCY	1 cut(s)	74
Psp6I	CCWGG	1 cut(s)	2501
PspEI	GGTNACC	1 cut(s)	2558
PspGI	CCWGG	1 cut(s)	2501
PspN4I	GGNNCC	1 cut(s)	2457
PspPI	GGNCC	1 cut(s)	74
PspPPI	RGGWCCY	1 cut(s)	74
PsuI	RGATCY	6 cut(s)	193, 1000, 1950, 2077, 2455, 2519
PsyI	GACNNNGTC	1 cut(s)	121
RruI	TCGCGA	1 cut(s)	137
RsaI	GTAC	3 cut(s)	1174, 2416, 2482
RsaNI	GTAC	3 cut(s)	1173, 2415, 2481
RseI	CAYNNNNRTG	3 cut(s)	240, 2046, 2444
SalI	GTCGAC	1 cut(s)	115
SatI	GCNGC	5 cut(s)	894, 1448, 1587, 1838, 1869
Sau96I	GGNCC	1 cut(s)	74
ScaI	AGTACT	1 cut(s)	2416
SchI	GAGTC	7 cut(s)	122, 344, 440, 490, 524, 561, 1148
ScrFI	CCNGG	1 cut(s)	2503
SduI	GDGCHC	1 cut(s)	237
SfaNI	GCATC	5 cut(s)	403, 733, 1066, 1583, 1836
SfcI	CTRYAG	1 cut(s)	690
Sfr274I	CTCGAG	1 cut(s)	569
SfuI	TTCGAA	1 cut(s)	2171
SinI	GGWCC	1 cut(s)	74
SlaI	CTCGAG	1 cut(s)	569
SmiMI	CAYNNNNRTG	3 cut(s)	240, 2046, 2444
SmlI	CTYRAG	4 cut(s)	569, 728, 854, 1634
SmoI	CTYRAG	4 cut(s)	569, 728, 854, 1634
SsiI	CCGC	2 cut(s)	107, 153
SspI	AATATT	1 cut(s)	2353
StyD4I	CCNGG	1 cut(s)	2501
TaaI	ACNGT	7 cut(s)	476, 609, 1029, 1656, 1934, 2307, 2443
TaiI	ACGT	2 cut(s)	763, 2545
TaqI	TCGA	7 cut(s)	20, 56, 116, 570, 945, 1780, 2171
TaqII	GACCGA	1 cut(s)	52
TatI	WGTACW	3 cut(s)	1172, 2414, 2480
TfiI	GAWTC	9 cut(s)	538, 641, 1277, 1543, 1567, 1829, 2264, 2377, 2584
TscAI	CASTG	4 cut(s)	1939, 2132, 2301, 2310
TseFI	GTSAC	2 cut(s)	365, 2558
TseI	GCWGC	5 cut(s)	893, 1447, 1586, 1837, 1868
Tsp45I	GTSAC	2 cut(s)	365, 2558
TspGWI	ACGGA	1 cut(s)	230
TspRI	CASTG	4 cut(s)	1939, 2132, 2301, 2310
Tth111I	GACNNNGTC	1 cut(s)	121
VpaK11BI	GGWCC	1 cut(s)	74
VspI	ATTAAT	1 cut(s)	1701
XapI	RAATTY	4 cut(s)	1131, 1915, 2167, 2332
XbaI	TCTAGA	1 cut(s)	934
XceI	RCATGY	3 cut(s)	1454, 1853, 1868
XhoI	CTCGAG	1 cut(s)	569
XmiI	GTMKAC	1 cut(s)	116
XmnI	GAANNNNTTC	2 cut(s)	86, 269
ZrmI	AGTACT	1 cut(s)	2416
Zsp2I	ATGCAT	2 cut(s)	1851, 2611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.