Synaptonemal complex protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 677 - 742 | 3.2e-07 | Endonuclease/Exonuclease/phosphatase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 92 |
| AccII | CGCG | 1 cut(s) | 79 |
| AciI | CCGC | 3 cut(s) | 83, 129, 1969 |
| AclWI | GGATC | 5 cut(s) | 21, 1720, 1860, 2057, 2264 |
| AcsI | RAATTY | 5 cut(s) | 829, 1038, 1690, 2018, 2122 |
| AcuI | CTGAAG | 6 cut(s) | 1016, 1140, 1352, 1646, 1796, 1823 |
| AfaI | GTAC | 3 cut(s) | 1081, 2075, 2178 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1092, 2092, 2288 |
| AgeI | ACCGGT | 1 cut(s) | 2328 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 602, 634 |
| AleI | CACNNNNGTG | 1 cut(s) | 216 |
| Alw21I | GWGCWC | 3 cut(s) | 213, 2001, 2328 |
| Alw26I | GTCTC | 3 cut(s) | 536, 925, 1135 |
| Alw44I | GTGCAC | 2 cut(s) | 1997, 2324 |
| AlwI | GGATC | 5 cut(s) | 21, 1720, 1860, 2057, 2264 |
| Ama87I | CYCGRG | 1 cut(s) | 530 |
| AoxI | GGCC | 1 cut(s) | 2290 |
| ApaLI | GTGCAC | 2 cut(s) | 1997, 2324 |
| ApeKI | GCWGC | 5 cut(s) | 374, 479, 800, 1354, 1493 |
| ApoI | RAATTY | 5 cut(s) | 829, 1038, 1690, 2018, 2122 |
| AsiGI | ACCGGT | 1 cut(s) | 2328 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 62, 245 |
| AspS9I | GGNCC | 1 cut(s) | 50 |
| AsuHPI | GGTGA | 3 cut(s) | 118, 635, 1352 |
| AsuII | TTCGAA | 1 cut(s) | 2205 |
| AvaI | CYCGRG | 1 cut(s) | 530 |
| AvaII | GGWCC | 1 cut(s) | 50 |
| BaeGI | GKGCMC | 2 cut(s) | 2001, 2328 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1088, 1121 |
| BbsI | GAAGAC | 3 cut(s) | 65, 1652, 2159 |
| Bbv12I | GWGCWC | 3 cut(s) | 213, 2001, 2328 |
| BbvI | GCAGC | 5 cut(s) | 361, 491, 787, 1366, 1480 |
| BccI | CCATC | 4 cut(s) | 428, 723, 1316, 1363 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1047, 1081 |
| BciVI | GTATCC | 1 cut(s) | 1089 |
| BclI | TGATCA | 3 cut(s) | 343, 940, 1597 |
| BcoDI | GTCTC | 3 cut(s) | 536, 925, 1135 |
| BfaI | CTAG | 7 cut(s) | 473, 842, 1253, 1403, 1503, 1556, 2097 |
| BfmI | CTRYAG | 1 cut(s) | 2345 |
| BfuI | GTATCC | 1 cut(s) | 1089 |
| BglII | AGATCT | 2 cut(s) | 169, 907 |
| BisI | GCNGC | 5 cut(s) | 375, 480, 801, 1355, 1494 |
| BlpI | GCTNAGC | 1 cut(s) | 918 |
| BlsI | GCNGC | 5 cut(s) | 376, 481, 802, 1356, 1495 |
| Bme18I | GGWCC | 1 cut(s) | 50 |
| BmeT110I | CYCGRG | 1 cut(s) | 530 |
| BmgT120I | GGNCC | 1 cut(s) | 50 |
| BmsI | GCATC | 4 cut(s) | 640, 973, 1490, 2140 |
| BpiI | GAAGAC | 3 cut(s) | 65, 1652, 2159 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 80, 112 |
| BpmI | CTGGAG | 2 cut(s) | 536, 1643 |
| Bpu10I | CCTNAGC | 2 cut(s) | 681, 2294 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 918 |
| Bpu14I | TTCGAA | 1 cut(s) | 2205 |
| BpuEI | CTTGAG | 5 cut(s) | 656, 782, 1562, 1979, 2213 |
| BsaBI | GATNNNNATC | 1 cut(s) | 714 |
| BsaI | GGTCTC | 1 cut(s) | 1135 |
| BsaJI | CCNNGG | 2 cut(s) | 2044, 2287 |
| BsaWI | WCCGGW | 1 cut(s) | 2328 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1092, 2092, 2288 |
| Bse118I | RCCGGY | 1 cut(s) | 2328 |
| Bse1I | ACTGG | 3 cut(s) | 886, 2007, 2272 |
| Bse3DI | GCAATG | 1 cut(s) | 1436 |
| Bse8I | GATNNNNATC | 1 cut(s) | 714 |
| BseDI | CCNNGG | 2 cut(s) | 2044, 2287 |
| BseGI | GGATG | 4 cut(s) | 213, 661, 1481, 2157 |
| BseJI | GATNNNNATC | 1 cut(s) | 714 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1092, 2092, 2288 |
| BseMI | GCAATG | 1 cut(s) | 1436 |
| BseMII | CTCAG | 8 cut(s) | 369, 695, 941, 1203, 1251, 1260, 1787, 2202 |
| BseNI | ACTGG | 3 cut(s) | 886, 2007, 2272 |
| BseRI | GAGGAG | 5 cut(s) | 554, 1886, 1943, 1946, 2266 |
| BseSI | GKGCMC | 2 cut(s) | 2001, 2328 |
| BseXI | GCAGC | 5 cut(s) | 361, 491, 787, 1366, 1480 |
| BsgI | GTGCAG | 3 cut(s) | 441, 592, 786 |
| Bsh1236I | CGCG | 1 cut(s) | 79 |
| BshFI | GGCC | 1 cut(s) | 2292 |
| BshTI | ACCGGT | 1 cut(s) | 2328 |
| BsiHKAI | GWGCWC | 3 cut(s) | 213, 2001, 2328 |
| BsiHKCI | CYCGRG | 1 cut(s) | 530 |
| BsiSI | CCGG | 2 cut(s) | 86, 2329 |
| BslFI | GGGAC | 2 cut(s) | 10, 1994 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1092, 2092, 2288 |
| BsmAI | GTCTC | 3 cut(s) | 536, 925, 1135 |
| BsmBI | CGTCTC | 1 cut(s) | 536 |
| BsmFI | GGGAC | 2 cut(s) | 10, 1994 |
| BsnI | GGCC | 1 cut(s) | 2292 |
| Bso31I | GGTCTC | 1 cut(s) | 1135 |
| BsoBI | CYCGRG | 1 cut(s) | 530 |
| Bsp119I | TTCGAA | 1 cut(s) | 2205 |
| Bsp1286I | GDGCHC | 3 cut(s) | 213, 2001, 2328 |
| Bsp1407I | TGTACA | 1 cut(s) | 1079 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 918 |
| BspACI | CCGC | 3 cut(s) | 83, 129, 1969 |
| BspANI | GGCC | 1 cut(s) | 2292 |
| BspCNI | CTCAG | 8 cut(s) | 370, 694, 940, 1204, 1252, 1259, 1788, 2203 |
| BspFNI | CGCG | 1 cut(s) | 79 |
| BspPI | GGATC | 5 cut(s) | 21, 1720, 1860, 2057, 2264 |
| BspT104I | TTCGAA | 1 cut(s) | 2205 |
| BspTNI | GGTCTC | 1 cut(s) | 1135 |
| BsrDI | GCAATG | 1 cut(s) | 1436 |
| BsrFI | RCCGGY | 1 cut(s) | 2328 |
| BsrGI | TGTACA | 1 cut(s) | 1079 |
| BsrI | ACTGG | 3 cut(s) | 886, 2007, 2272 |
| BssAI | RCCGGY | 1 cut(s) | 2328 |
| BssECI | CCNNGG | 2 cut(s) | 2044, 2287 |
| BssT1I | CCWWGG | 2 cut(s) | 2044, 2287 |
| Bst4CI | ACNGT | 5 cut(s) | 570, 936, 956, 1563, 1709 |
| Bst6I | CTCTTC | 2 cut(s) | 79, 2243 |
| BstAUI | TGTACA | 1 cut(s) | 1079 |
| BstBI | TTCGAA | 1 cut(s) | 2205 |
| BstC8I | GCNNGC | 3 cut(s) | 153, 924, 1388 |
| BstF5I | GGATG | 4 cut(s) | 213, 661, 1481, 2157 |
| BstFNI | CGCG | 1 cut(s) | 79 |
| BstMAI | GTCTC | 3 cut(s) | 536, 925, 1135 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| BstNSI | RCATGY | 1 cut(s) | 1361 |
| BstSFI | CTRYAG | 1 cut(s) | 2345 |
| BstSLI | GKGCMC | 2 cut(s) | 2001, 2328 |
| BstUI | CGCG | 1 cut(s) | 79 |
| BstV1I | GCAGC | 5 cut(s) | 361, 491, 787, 1366, 1480 |
| BstV2I | GAAGAC | 3 cut(s) | 65, 1652, 2159 |
| BstX2I | RGATCY | 4 cut(s) | 169, 907, 1725, 1852 |
| BstYI | RGATCY | 4 cut(s) | 169, 907, 1725, 1852 |
| BsuI | GTATCC | 1 cut(s) | 1089 |
| BsuRI | GGCC | 1 cut(s) | 2292 |
| BtsCI | GGATG | 4 cut(s) | 213, 661, 1481, 2157 |
| BtsI | GCAGTG | 1 cut(s) | 1907 |
| BtsIMutI | CAGTG | 4 cut(s) | 575, 1714, 1907, 2014 |
| Cac8I | GCNNGC | 3 cut(s) | 153, 924, 1388 |
| Cfr10I | RCCGGY | 1 cut(s) | 2328 |
| Cfr13I | GGNCC | 1 cut(s) | 50 |
| CseI | GACGC | 1 cut(s) | 68 |
| Csp6I | GTAC | 3 cut(s) | 1080, 2074, 2177 |
| CspAI | ACCGGT | 1 cut(s) | 2328 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1883, 1918 |
| CviQI | GTAC | 3 cut(s) | 1080, 2074, 2177 |
| DraI | TTTAAA | 2 cut(s) | 268, 1695 |
| Eam1104I | CTCTTC | 2 cut(s) | 79, 2243 |
| EarI | CTCTTC | 2 cut(s) | 79, 2243 |
| EciI | GGCGGA | 1 cut(s) | 72 |
| Eco130I | CCWWGG | 2 cut(s) | 2044, 2287 |
| Eco147I | AGGCCT | 1 cut(s) | 2292 |
| Eco31I | GGTCTC | 1 cut(s) | 1135 |
| Eco47I | GGWCC | 1 cut(s) | 50 |
| Eco57I | CTGAAG | 6 cut(s) | 1016, 1140, 1352, 1646, 1796, 1823 |
| Eco88I | CYCGRG | 1 cut(s) | 530 |
| EcoO109I | RGGNCCY | 1 cut(s) | 50 |
| EcoT14I | CCWWGG | 2 cut(s) | 2044, 2287 |
| ErhI | CCWWGG | 2 cut(s) | 2044, 2287 |
| Esp3I | CGTCTC | 1 cut(s) | 536 |
| FaqI | GGGAC | 2 cut(s) | 10, 1994 |
| FbaI | TGATCA | 3 cut(s) | 343, 940, 1597 |
| FblI | GTMKAC | 1 cut(s) | 92 |
| Fnu4HI | GCNGC | 5 cut(s) | 375, 480, 801, 1355, 1494 |
| FokI | GGATG | 4 cut(s) | 200, 668, 1468, 2144 |
| Fsp4HI | GCNGC | 5 cut(s) | 375, 480, 801, 1355, 1494 |
| FspBI | CTAG | 7 cut(s) | 473, 842, 1253, 1403, 1503, 1556, 2097 |
| GluI | GCNGC | 5 cut(s) | 375, 480, 801, 1355, 1494 |
| GsuI | CTGGAG | 2 cut(s) | 536, 1643 |
| HaeIII | GGCC | 1 cut(s) | 2292 |
| HapII | CCGG | 2 cut(s) | 86, 2329 |
| HgaI | GACGC | 1 cut(s) | 68 |
| HincII | GTYRAC | 2 cut(s) | 93, 1633 |
| HindII | GTYRAC | 2 cut(s) | 93, 1633 |
| HindIII | AAGCTT | 6 cut(s) | 7, 106, 153, 920, 1835, 1973 |
| HpaI | GTTAAC | 1 cut(s) | 1633 |
| HpaII | CCGG | 2 cut(s) | 86, 2329 |
| HphI | GGTGA | 3 cut(s) | 118, 635, 1352 |
| Hpy166II | GTNNAC | 7 cut(s) | 93, 1328, 1550, 1633, 1712, 1999, 2326 |
| Hpy8I | GTNNAC | 7 cut(s) | 93, 1328, 1550, 1633, 1712, 1999, 2326 |
| Hpy99I | CGWCG | 1 cut(s) | 103 |
| HpyAV | CCTTC | 8 cut(s) | 73, 274, 295, 395, 773, 1327, 1331, 2293 |
| HpyCH4III | ACNGT | 5 cut(s) | 570, 936, 956, 1563, 1709 |
| HpyCH4IV | ACGT | 1 cut(s) | 667 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| HpySE526I | ACGT | 1 cut(s) | 667 |
| Ksp22I | TGATCA | 3 cut(s) | 343, 940, 1597 |
| KspAI | GTTAAC | 1 cut(s) | 1633 |
| LmnI | GCTCC | 5 cut(s) | 208, 511, 1414, 1933, 1955 |
| Lsp1109I | GCAGC | 5 cut(s) | 361, 491, 787, 1366, 1480 |
| LweI | GCATC | 4 cut(s) | 640, 973, 1490, 2140 |
| MaeI | CTAG | 7 cut(s) | 473, 842, 1253, 1403, 1503, 1556, 2097 |
| MaeII | ACGT | 1 cut(s) | 667 |
| MfeI | CAATTG | 2 cut(s) | 992, 1895 |
| MflI | RGATCY | 4 cut(s) | 169, 907, 1725, 1852 |
| MhlI | GDGCHC | 3 cut(s) | 213, 2001, 2328 |
| MlyI | GAGTC | 6 cut(s) | 98, 320, 401, 522, 1055, 1976 |
| MmeI | TCCRAC | 2 cut(s) | 1086, 1753 |
| MroXI | GAANNNNTTC | 2 cut(s) | 62, 245 |
| MseI | TTAA | 8 cut(s) | 267, 647, 738, 968, 1632, 1694, 1763, 1830 |
| MslI | CAYNNNNRTG | 3 cut(s) | 216, 1821, 2321 |
| MspA1I | CMGCKG | 1 cut(s) | 1969 |
| MspI | CCGG | 2 cut(s) | 86, 2329 |
| MunI | CAATTG | 2 cut(s) | 992, 1895 |
| MvnI | CGCG | 1 cut(s) | 79 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 809, 923 |
| NmeAIII | GCCGAG | 1 cut(s) | 392 |
| NspI | RCATGY | 1 cut(s) | 1361 |
| NspV | TTCGAA | 1 cut(s) | 2205 |
| OliI | CACNNNNGTG | 1 cut(s) | 216 |
| PaeR7I | CTCGAG | 1 cut(s) | 530 |
| PceI | AGGCCT | 1 cut(s) | 2292 |
| PdmI | GAANNNNTTC | 2 cut(s) | 62, 245 |
| PfeI | GAWTC | 4 cut(s) | 499, 1184, 1450, 1474 |
| PflFI | GACNNNGTC | 1 cut(s) | 97 |
| PinAI | ACCGGT | 1 cut(s) | 2328 |
| PkrI | GCNGC | 5 cut(s) | 376, 481, 802, 1356, 1495 |
| PleI | GAGTC | 6 cut(s) | 97, 319, 400, 522, 1054, 1976 |
| PpsI | GAGTC | 6 cut(s) | 97, 319, 400, 522, 1054, 1976 |
| PpuMI | RGGWCCY | 1 cut(s) | 50 |
| Psp5II | RGGWCCY | 1 cut(s) | 50 |
| PspPI | GGNCC | 1 cut(s) | 50 |
| PspPPI | RGGWCCY | 1 cut(s) | 50 |
| PsuI | RGATCY | 4 cut(s) | 169, 907, 1725, 1852 |
| PsyI | GACNNNGTC | 1 cut(s) | 97 |
| RsaI | GTAC | 3 cut(s) | 1081, 2075, 2178 |
| RsaNI | GTAC | 3 cut(s) | 1080, 2074, 2177 |
| RseI | CAYNNNNRTG | 3 cut(s) | 216, 1821, 2321 |
| SalI | GTCGAC | 1 cut(s) | 91 |
| SaqAI | TTAA | 8 cut(s) | 267, 647, 738, 968, 1632, 1694, 1763, 1830 |
| SatI | GCNGC | 5 cut(s) | 375, 480, 801, 1355, 1494 |
| Sau96I | GGNCC | 1 cut(s) | 50 |
| SchI | GAGTC | 6 cut(s) | 98, 320, 401, 522, 1055, 1976 |
| SduI | GDGCHC | 3 cut(s) | 213, 2001, 2328 |
| SfaNI | GCATC | 4 cut(s) | 640, 973, 1490, 2140 |
| SfcI | CTRYAG | 1 cut(s) | 2345 |
| Sfr274I | CTCGAG | 1 cut(s) | 530 |
| SfuI | TTCGAA | 1 cut(s) | 2205 |
| SinI | GGWCC | 1 cut(s) | 50 |
| SlaI | CTCGAG | 1 cut(s) | 530 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 216, 1821, 2321 |
| SmlI | CTYRAG | 6 cut(s) | 530, 635, 761, 1541, 1958, 2192 |
| SmoI | CTYRAG | 6 cut(s) | 530, 635, 761, 1541, 1958, 2192 |
| SseBI | AGGCCT | 1 cut(s) | 2292 |
| SsiI | CCGC | 3 cut(s) | 83, 129, 1969 |
| SspI | AATATT | 1 cut(s) | 2111 |
| SspMI | CTAG | 7 cut(s) | 473, 842, 1253, 1403, 1503, 1556, 2097 |
| StuI | AGGCCT | 1 cut(s) | 2292 |
| StyI | CCWWGG | 2 cut(s) | 2044, 2287 |
| TaaI | ACNGT | 5 cut(s) | 570, 936, 956, 1563, 1709 |
| TaiI | ACGT | 1 cut(s) | 670 |
| TaqI | TCGA | 6 cut(s) | 92, 111, 531, 852, 2205, 2338 |
| TatI | WGTACW | 1 cut(s) | 1079 |
| TfiI | GAWTC | 4 cut(s) | 499, 1184, 1450, 1474 |
| Tru1I | TTAA | 8 cut(s) | 267, 647, 738, 968, 1632, 1694, 1763, 1830 |
| Tru9I | TTAA | 8 cut(s) | 267, 647, 738, 968, 1632, 1694, 1763, 1830 |
| TscAI | CASTG | 4 cut(s) | 575, 1714, 1907, 2014 |
| TseI | GCWGC | 5 cut(s) | 374, 479, 800, 1354, 1493 |
| TspGWI | ACGGA | 2 cut(s) | 206, 560 |
| TspRI | CASTG | 4 cut(s) | 575, 1714, 1907, 2014 |
| Tth111I | GACNNNGTC | 1 cut(s) | 97 |
| VneI | GTGCAC | 2 cut(s) | 1997, 2324 |
| VpaK11BI | GGWCC | 1 cut(s) | 50 |
| XapI | RAATTY | 5 cut(s) | 829, 1038, 1690, 2018, 2122 |
| XbaI | TCTAGA | 1 cut(s) | 841 |
| XceI | RCATGY | 1 cut(s) | 1361 |
| XhoI | CTCGAG | 1 cut(s) | 530 |
| XmiI | GTMKAC | 1 cut(s) | 92 |
| XmnI | GAANNNNTTC | 2 cut(s) | 62, 245 |
| XspI | CTAG | 7 cut(s) | 473, 842, 1253, 1403, 1503, 1556, 2097 |