Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000742

Physical Location & Seq

Genomic Coordinates Forward (+)

17712552 .. 17717865

Gene Structure 5314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0112400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGAAAGCTTCTAAGTACTTTGTTGTTCTTTTTCTGCCCCCTTTTTCTTCTCCGGACGTATATGAAGGCATATGCAGCAAGTTTGCCTTCGATGACACTGCTGGGTTAGTTGCCTTGAGTACAGAGAACTATCGCATCCAGTTTTATAGCTTGTTTGATGACCGTGAAATTTCTGAGGTTCAAGTCTGCGGGAGAAACCATCAACCAGGCGATGAAGTCTCTGTAATAGTGACTTTGGTGTCTCTGTCTGGAGATGGCTCTATGATGAGCACGGTGGAAGTTAATCTTCCTGAGGATGGAATAGGTGGTCTTGTGTGTCTTAAGTTCTGGGCATCAGATTCGCAGAACAAAAATTTCAACTTGTCCACCATTGTGTCTGAACCTCACAGGGATGCTGGAGTTTCTGCTCTTGCTTTTCATCCTACCCGTCAAATGGTTGTCAGTTCATCATATGGTGGGGATTTCAAGATTTGGGTTTGCAGTGACGAGATTCAGCAGAAACAAGATACACTACAGCATTCTGGGTGGATGTGCCATGCTGTAAGTTCATACAAGAAAAAGCCAATGACAGCTGCTGCATTTTCTGCCGATGGTTTTGTTCTGGCTGTTGCAGCTGAAACTGTAATCACACTATGGGACCCTGTGAGCAACATGCTTGTGGCTGTGCTTGGAGAGATGCAGATGCCAATTGTGACCCTCTCCTTTGCTGGGAATTCGGACTATCTTTTGTCTATCTCCCGGGGTTCAAAACCACAGTTATCGGTGTGGAGCATGTCAAAGCTGTCTGAGTCTTGGTCATACAAGCTTGACATAGAAGATGTTACATGTGCGAAAGATTCTTCATCATTTGCAGTTCTTGCCCTTTTGCCAAAATCATCTACTTTTATGGGCTCTAATGAACCAATTTTTCAAGAAAAAGATGGGGTAATCTTATTATTCAATGCAACAGATCCTGTTCCATTGGCTATGTGGTCCGTAAGGAAGGCCAAGGGAGGGGGACTTGCTTTCCTTAAAGGGAACTCACCTTCCTTTCAACAACAAAGTATAGCAGATGGAAAATCACCACAAGCTTTGCTTGCCTATATAAATGCCGATCATGAGTACATCCTCTTTGGTCCATATGACAACGATGCACGTGAACTTAGTATGACCAGGGGGAAGGATCGTGTTGCCGTTGACGAAACAGCGCAATATGGATATGCATCTATCTATGGGGAGCTACCTCAATTTGAGATGAAGAGAGACCAGACCTTGTTAGCCCCATATGCTCCATTACAAAGGCCTTGGGAGACCATTTTTAGTGGGTCATCACATAATCTTCTACCCCTACCTAAATTGTGTTTAGAGTTTATGGAATCGCTACTAGAAAGGAGGACTACCACAGTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0000802 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0051276 GO:0051321 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

463

Amino Acids

51.01

Weight (kDa)

4.95

Isoelectric Point (pI)

40.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR75_2nd	PF23769	39 - 294	1.3e-33	WD repeat-containing protein 75 second beta-propeller
WD40_Prp19	PF24814	108 - 270	2.3e-12	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	125 - 266	4e-08	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	131 - 260	1.5e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	134 - 268	3.2e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22260 AT1G22260 AT1G22260 AT1G22275 AT1G22275 AT1G22275
fragaria_vesca	FvH4_5g32650 FvH4_5g32780 FvH4_5g37341 FvH4_5g37341 FvH4_5g37341 FvH4_5g37878 FvH4_5g39260 FvH4_5g39261 FvH4_6g40021
malus_domestica	MD15G1368600.v1.1
prunus_persica	Prupe.1G516800_v2.0.a1
pyrus_communis	pycom15g33040
rosa_chinensis	RchiOBHm_Chr0c28g0500891 RchiOBHm_Chr0c28g0500941 RchiOBHm_Chr0c28g0500951 RchiOBHm_Chr0c28g0501001 RchiOBHm_Chr0c28g0501031 RchiOBHm_Chr0c28g0501041 RchiOBHm_Chr2g0168611 RchiOBHm_Chr7g0227211 RchiOBHm_Chr7g0239001 RchiOBHm_Chr7g0240441 RchiOBHm_Chr7g0243501 RchiOBHm_Chr7g0243551 RchiOBHm_Chr7g0243591 RchiOBHm_Chr7g0243601 RchiOBHm_Chr7g0243631
rosa_laevigata	RLG00000000697 RLG00000000791 RLG00000001655 RLG00000012649 RLG00000029503 RLG00000029517
rosa_multiflora	Rmu_sc0000477.1_g000005 Rmu_sc0000808.1_g000048 Rmu_sc0001157.1_g000007 Rmu_sc0003467.1_g000028 Rmu_sc0004062.1_g000005 Rmu_sc0004062.1_g000012 Rmu_sc0004132.1_g000002 Rmu_sc0007030.1_g000007 Rmu_sc0007424.1_g000006
rosa_roxburghii	Rroxscaffold_3G00220080 Rroxscaffold_3G00221390 Rroxscaffold_3G00222050 Rroxscaffold_3G00222080
rosa_rugosa	Rorug04G0112400 Rorug04G0112500 Rorug04G0112500 Rorug05G0574800 Rorug07G0324400 Rorug07G0324800
rosa_samantha	Rh2CG397000 Rh5BG532300 Rh5BG532500 Rh5CG411900 Rh5CG556200 Rh7BG420900 Rh7BG452000 Rh7CG496600 Rh7CG496800 Rh7DG464100
rosa_wichuraiana	Rw2G046820 Rw5G047300 Rw7G039610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	238
AccIII	TCCGGA	1 cut(s)	52
AciI	CCGC	1 cut(s)	189
AclWI	GGATC	2 cut(s)	944, 1170
AcsI	RAATTY	3 cut(s)	168, 352, 712
AcvI	CACGTG	1 cut(s)	1136
AfaI	GTAC	3 cut(s)	17, 121, 1103
AfiI	CCNNNNNNNGG	4 cut(s)	296, 433, 708, 993
AflII	CTTAAG	1 cut(s)	320
AflIII	ACRYGT	1 cut(s)	824
AgsI	TTSAA	7 cut(s)	182, 358, 466, 747, 911, 940, 1034
AjnI	CCWGG	2 cut(s)	205, 1151
AleI	CACNNNNGTG	1 cut(s)	371
AloI	GAACNNNNNNTCC	2 cut(s)	1010, 1042
AluBI	AGCT	8 cut(s)	8, 150, 572, 614, 781, 805, 1070, 1219
AluI	AGCT	8 cut(s)	8, 150, 572, 614, 781, 805, 1070, 1219
Alw21I	GWGCWC	1 cut(s)	272
Alw26I	GTCTC	4 cut(s)	223, 246, 1236, 1283
AlwI	GGATC	2 cut(s)	944, 1170
AlwNI	CAGNNNCTG	2 cut(s)	575, 953
Ama87I	CYCGRG	1 cut(s)	738
Aor13HI	TCCGGA	1 cut(s)	52
AoxI	GGCC	2 cut(s)	984, 1280
ApeKI	GCWGC	4 cut(s)	75, 572, 575, 611
ApoI	RAATTY	3 cut(s)	168, 352, 712
AspLEI	GCGC	1 cut(s)	1189
AspS9I	GGNCC	3 cut(s)	637, 972, 1115
AsuC2I	CCSGG	2 cut(s)	739, 740
AsuHPI	GGTGA	2 cut(s)	1014, 1053
AvaI	CYCGRG	1 cut(s)	738
AvaII	GGWCC	3 cut(s)	637, 972, 1115
AxyI	CCTNAGG	1 cut(s)	291
BanII	GRGCYC	1 cut(s)	893
BbrPI	CACGTG	1 cut(s)	1136
Bbv12I	GWGCWC	1 cut(s)	272
BbvI	GCAGC	4 cut(s)	87, 559, 562, 623
BccI	CCATC	6 cut(s)	207, 248, 290, 584, 914, 1046
BceAI	ACGGC	1 cut(s)	1157
BcgI	CGANNNNNNTGC	4 cut(s)	80, 114, 321, 355
BciT130I	CCWGG	2 cut(s)	207, 1153
BcnI	CCSGG	2 cut(s)	739, 740
BcoDI	GTCTC	4 cut(s)	223, 246, 1236, 1283
BfaI	CTAG	1 cut(s)	1364
BfmI	CTRYAG	1 cut(s)	512
BfrI	CTTAAG	1 cut(s)	320
BisI	GCNGC	4 cut(s)	76, 573, 576, 612
BlsI	GCNGC	4 cut(s)	77, 574, 577, 613
BmcAI	AGTACT	1 cut(s)	17
Bme1390I	CCNGG	4 cut(s)	207, 739, 740, 1153
Bme18I	GGWCC	3 cut(s)	637, 972, 1115
BmeT110I	CYCGRG	1 cut(s)	738
BmgT120I	GGNCC	3 cut(s)	637, 972, 1115
BmiI	GGNNCC	2 cut(s)	638, 639
BmrFI	CCNGG	4 cut(s)	207, 739, 740, 1153
BmsI	GCATC	7 cut(s)	144, 341, 382, 666, 672, 1120, 1211
BpmI	CTGGAG	2 cut(s)	270, 417
BpuEI	CTTGAG	1 cut(s)	136
BpuMI	CCSGG	2 cut(s)	739, 740
BsaAI	YACGTR	1 cut(s)	1136
BsaBI	GATNNNNATC	1 cut(s)	1201
BsaI	GGTCTC	2 cut(s)	1236, 1283
BsaJI	CCNNGG	5 cut(s)	738, 739, 987, 1152, 1283
BsaWI	WCCGGW	1 cut(s)	52
Bsc4I	CCNNNNNNNGG	4 cut(s)	296, 433, 708, 993
Bse1I	ACTGG	1 cut(s)	139
Bse21I	CCTNAGG	1 cut(s)	291
Bse8I	GATNNNNATC	1 cut(s)	1201
BseAI	TCCGGA	1 cut(s)	52
BseBI	CCWGG	2 cut(s)	207, 1153
BseDI	CCNNGG	5 cut(s)	738, 739, 987, 1152, 1283
BseGI	GGATG	6 cut(s)	135, 301, 397, 418, 534, 1104
BseJI	GATNNNNATC	1 cut(s)	1201
BseLI	CCNNNNNNNGG	4 cut(s)	296, 433, 708, 993
BseMII	CTCAG	3 cut(s)	165, 282, 777
BseNI	ACTGG	1 cut(s)	139
BseXI	GCAGC	4 cut(s)	87, 559, 562, 623
BseYI	CCCAGC	2 cut(s)	101, 707
BshFI	GGCC	2 cut(s)	986, 1282
BsiHKAI	GWGCWC	1 cut(s)	272
BsiHKCI	CYCGRG	1 cut(s)	738
BsiSI	CCGG	2 cut(s)	53, 739
BslFI	GGGAC	2 cut(s)	650, 1011
BslI	CCNNNNNNNGG	4 cut(s)	296, 433, 708, 993
BsmAI	GTCTC	4 cut(s)	223, 246, 1236, 1283
BsmFI	GGGAC	2 cut(s)	650, 1011
BsmI	GAATGC	1 cut(s)	517
BsnI	GGCC	2 cut(s)	986, 1282
Bso31I	GGTCTC	2 cut(s)	1236, 1283
BsoBI	CYCGRG	1 cut(s)	738
Bsp1286I	GDGCHC	2 cut(s)	272, 893
Bsp13I	TCCGGA	1 cut(s)	52
Bsp143I	GATC	3 cut(s)	949, 1093, 1162
BspACI	CCGC	1 cut(s)	189
BspANI	GGCC	2 cut(s)	986, 1282
BspCNI	CTCAG	3 cut(s)	166, 283, 778
BspEI	TCCGGA	1 cut(s)	52
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	2 cut(s)	638, 639
BspPI	GGATC	2 cut(s)	944, 1170
BspTI	CTTAAG	1 cut(s)	320
BspTNI	GGTCTC	2 cut(s)	1236, 1283
BsrI	ACTGG	1 cut(s)	139
BssECI	CCNNGG	5 cut(s)	738, 739, 987, 1152, 1283
BssMI	GATC	3 cut(s)	949, 1093, 1162
BssT1I	CCWWGG	2 cut(s)	987, 1283
Bst2UI	CCWGG	2 cut(s)	207, 1153
Bst4CI	ACNGT	5 cut(s)	164, 274, 622, 756, 1384
Bst6I	CTCTTC	1 cut(s)	1232
BstAFI	CTTAAG	1 cut(s)	320
BstAPI	GCANNNNNTGC	2 cut(s)	584, 857
BstBAI	YACGTR	1 cut(s)	1136
BstC8I	GCNNGC	1 cut(s)	1077
BstDEI	CTNAG	5 cut(s)	12, 174, 291, 786, 1142
BstF5I	GGATG	6 cut(s)	135, 301, 397, 418, 534, 1104
BstHHI	GCGC	1 cut(s)	1189
BstKTI	GATC	3 cut(s)	952, 1096, 1165
BstMAI	GTCTC	4 cut(s)	223, 246, 1236, 1283
BstMBI	GATC	3 cut(s)	949, 1093, 1162
BstMWI	GCNNNNNNNGC	6 cut(s)	75, 584, 611, 857, 1076, 1265
BstNI	CCWGG	2 cut(s)	207, 1153
BstNSI	RCATGY	3 cut(s)	655, 775, 828
BstSCI	CCNGG	4 cut(s)	205, 737, 738, 1151
BstSFI	CTRYAG	1 cut(s)	512
BstV1I	GCAGC	4 cut(s)	87, 559, 562, 623
BstX2I	RGATCY	1 cut(s)	949
BstYI	RGATCY	1 cut(s)	949
Bsu36I	CCTNAGG	1 cut(s)	291
BsuRI	GGCC	2 cut(s)	986, 1282
BtgZI	GCGATG	1 cut(s)	225
BtsCI	GGATG	6 cut(s)	135, 301, 397, 418, 534, 1104
BtsI	GCAGTG	2 cut(s)	96, 487
BtsIMutI	CAGTG	2 cut(s)	96, 487
Cac8I	GCNNGC	1 cut(s)	1077
CaiI	CAGNNNCTG	2 cut(s)	575, 953
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	1 cut(s)	1189
Cfr13I	GGNCC	3 cut(s)	637, 972, 1115
Cfr9I	CCCGGG	1 cut(s)	738
Csp6I	GTAC	3 cut(s)	16, 120, 1102
CspCI	CAANNNNNGTGG	2 cut(s)	1053, 1088
CviAII	CATG	5 cut(s)	536, 652, 772, 825, 1097
CviQI	GTAC	3 cut(s)	16, 120, 1102
DdeI	CTNAG	5 cut(s)	12, 174, 291, 786, 1142
DpnI	GATC	3 cut(s)	951, 1095, 1164
DpnII	GATC	3 cut(s)	949, 1093, 1162
DrdI	GACNNNNNNGTC	1 cut(s)	238
DseDI	GACNNNNNNGTC	1 cut(s)	238
Eam1104I	CTCTTC	1 cut(s)	1232
EarI	CTCTTC	1 cut(s)	1232
Eco130I	CCWWGG	2 cut(s)	987, 1283
Eco147I	AGGCCT	1 cut(s)	1282
Eco24I	GRGCYC	1 cut(s)	893
Eco31I	GGTCTC	2 cut(s)	1236, 1283
Eco47I	GGWCC	3 cut(s)	637, 972, 1115
Eco72I	CACGTG	1 cut(s)	1136
Eco81I	CCTNAGG	1 cut(s)	291
Eco88I	CYCGRG	1 cut(s)	738
EcoO109I	RGGNCCY	1 cut(s)	637
EcoRI	GAATTC	1 cut(s)	712
EcoRII	CCWGG	2 cut(s)	205, 1151
EcoT14I	CCWWGG	2 cut(s)	987, 1283
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	893
ErhI	CCWWGG	2 cut(s)	987, 1283
FaeI	CATG	5 cut(s)	539, 655, 775, 828, 1100
FalI	AAGNNNNNCTT	6 cut(s)	71, 103, 270, 302, 1059, 1091
FaqI	GGGAC	2 cut(s)	650, 1011
FatI	CATG	5 cut(s)	535, 651, 771, 824, 1096
FauI	CCCGC	1 cut(s)	182
FauNDI	CATATG	4 cut(s)	71, 451, 1120, 1264
Fnu4HI	GCNGC	4 cut(s)	76, 573, 576, 612
FokI	GGATG	6 cut(s)	122, 308, 404, 405, 541, 1091
FriOI	GRGCYC	1 cut(s)	893
Fsp4HI	GCNGC	4 cut(s)	76, 573, 576, 612
FspBI	CTAG	1 cut(s)	1364
GlaI	GCGC	1 cut(s)	1188
GluI	GCNGC	4 cut(s)	76, 573, 576, 612
GsaI	CCCAGC	2 cut(s)	105, 711
GsuI	CTGGAG	2 cut(s)	270, 417
HaeIII	GGCC	2 cut(s)	986, 1282
HapII	CCGG	2 cut(s)	53, 739
HhaI	GCGC	1 cut(s)	1189
Hin1II	CATG	5 cut(s)	539, 655, 775, 828, 1100
Hin6I	GCGC	1 cut(s)	1187
HinP1I	GCGC	1 cut(s)	1187
HincII	GTYRAC	1 cut(s)	1177
HindII	GTYRAC	1 cut(s)	1177
HindIII	AAGCTT	3 cut(s)	6, 803, 1068
HinfI	GANTC	5 cut(s)	338, 490, 788, 836, 1355
HpaII	CCGG	2 cut(s)	53, 739
HphI	GGTGA	2 cut(s)	1014, 1053
Hpy166II	GTNNAC	3 cut(s)	366, 1139, 1177
Hpy188I	TCNGA	5 cut(s)	175, 337, 379, 718, 787
Hpy188III	TCNNGA	6 cut(s)	53, 249, 290, 466, 911, 1097
Hpy8I	GTNNAC	3 cut(s)	366, 1139, 1177
HpyAV	CCTTC	5 cut(s)	59, 97, 976, 1035, 1153
HpyCH4III	ACNGT	5 cut(s)	164, 274, 622, 756, 1384
HpyCH4IV	ACGT	2 cut(s)	57, 1135
HpyCH4V	TGCA	9 cut(s)	75, 480, 578, 611, 679, 851, 944, 1133, 1202
HpyF10VI	GCNNNNNNNGC	6 cut(s)	75, 584, 611, 857, 1076, 1265
HpyF3I	CTNAG	5 cut(s)	12, 174, 291, 786, 1142
HpySE526I	ACGT	2 cut(s)	57, 1135
Hsp92II	CATG	5 cut(s)	539, 655, 775, 828, 1100
HspAI	GCGC	1 cut(s)	1187
KflI	GGGWCCC	1 cut(s)	637
Kpn2I	TCCGGA	1 cut(s)	52
Kzo9I	GATC	3 cut(s)	949, 1093, 1162
LmnI	GCTCC	3 cut(s)	768, 1216, 1273
Lsp1109I	GCAGC	4 cut(s)	87, 559, 562, 623
LweI	GCATC	7 cut(s)	144, 341, 382, 666, 672, 1120, 1211
MaeI	CTAG	1 cut(s)	1364
MaeII	ACGT	2 cut(s)	57, 1135
MaeIII	GTNAC	4 cut(s)	229, 482, 691, 820
MalI	GATC	3 cut(s)	951, 1095, 1164
MboI	GATC	3 cut(s)	949, 1093, 1162
MboII	GAAGA	6 cut(s)	39, 278, 827, 831, 1249, 1310
MfeI	CAATTG	1 cut(s)	687
MflI	RGATCY	1 cut(s)	949
MhlI	GDGCHC	2 cut(s)	272, 893
MluCI	AATT	7 cut(s)	168, 352, 687, 712, 903, 1226, 1334
MlyI	GAGTC	1 cut(s)	797
MnlI	CCTC	8 cut(s)	169, 286, 393, 707, 986, 1118, 1233, 1365
Mph1103I	ATGCAT	1 cut(s)	1204
MroI	TCCGGA	1 cut(s)	52
MseI	TTAA	3 cut(s)	282, 321, 1011
MslI	CAYNNNNRTG	3 cut(s)	371, 390, 656
MspA1I	CMGCKG	2 cut(s)	572, 614
MspCI	CTTAAG	1 cut(s)	320
MspI	CCGG	2 cut(s)	53, 739
MspR9I	CCNGG	4 cut(s)	207, 739, 740, 1153
MunI	CAATTG	1 cut(s)	687
Mva1269I	GAATGC	1 cut(s)	517
MvaI	CCWGG	2 cut(s)	207, 1153
MwoI	GCNNNNNNNGC	6 cut(s)	75, 584, 611, 857, 1076, 1265
NciI	CCSGG	2 cut(s)	739, 740
NdeI	CATATG	4 cut(s)	71, 451, 1120, 1264
NdeII	GATC	3 cut(s)	949, 1093, 1162
NlaIII	CATG	5 cut(s)	539, 655, 775, 828, 1100
NlaIV	GGNNCC	2 cut(s)	638, 639
NmuCI	GTSAC	3 cut(s)	229, 482, 691
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	3 cut(s)	655, 775, 828
OliI	CACNNNNGTG	1 cut(s)	371
PagI	TCATGA	1 cut(s)	1096
PceI	AGGCCT	1 cut(s)	1282
PciI	ACATGT	1 cut(s)	824
PctI	GAATGC	1 cut(s)	517
PfeI	GAWTC	4 cut(s)	338, 490, 836, 1355
PkrI	GCNGC	4 cut(s)	77, 574, 577, 613
PleI	GAGTC	1 cut(s)	796
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
PpsI	GAGTC	1 cut(s)	796
Ppu21I	YACGTR	1 cut(s)	1136
PpuMI	RGGWCCY	1 cut(s)	637
PscI	ACATGT	1 cut(s)	824
Psp5II	RGGWCCY	1 cut(s)	637
Psp6I	CCWGG	2 cut(s)	205, 1151
PspCI	CACGTG	1 cut(s)	1136
PspFI	CCCAGC	2 cut(s)	101, 707
PspGI	CCWGG	2 cut(s)	205, 1151
PspN4I	GGNNCC	2 cut(s)	638, 639
PspPI	GGNCC	3 cut(s)	637, 972, 1115
PspPPI	RGGWCCY	1 cut(s)	637
PstNI	CAGNNNCTG	2 cut(s)	575, 953
PsuI	RGATCY	1 cut(s)	949
PvuII	CAGCTG	2 cut(s)	572, 614
RsaI	GTAC	3 cut(s)	17, 121, 1103
RsaNI	GTAC	3 cut(s)	16, 120, 1102
RseI	CAYNNNNRTG	3 cut(s)	371, 390, 656
SaqAI	TTAA	3 cut(s)	282, 321, 1011
SatI	GCNGC	4 cut(s)	76, 573, 576, 612
Sau3AI	GATC	3 cut(s)	949, 1093, 1162
Sau96I	GGNCC	3 cut(s)	637, 972, 1115
ScaI	AGTACT	1 cut(s)	17
SchI	GAGTC	1 cut(s)	797
ScrFI	CCNGG	4 cut(s)	207, 739, 740, 1153
SduI	GDGCHC	2 cut(s)	272, 893
SfaNI	GCATC	7 cut(s)	144, 341, 382, 666, 672, 1120, 1211
SfcI	CTRYAG	1 cut(s)	512
SinI	GGWCC	3 cut(s)	637, 972, 1115
SmaI	CCCGGG	1 cut(s)	740
SmiMI	CAYNNNNRTG	3 cut(s)	371, 390, 656
SmlI	CTYRAG	2 cut(s)	115, 320
SmoI	CTYRAG	2 cut(s)	115, 320
Sse9I	AATT	7 cut(s)	168, 352, 687, 712, 903, 1226, 1334
SseBI	AGGCCT	1 cut(s)	1282
SsiI	CCGC	1 cut(s)	189
SspMI	CTAG	1 cut(s)	1364
StuI	AGGCCT	1 cut(s)	1282
StyD4I	CCNGG	4 cut(s)	205, 737, 738, 1151
StyI	CCWWGG	2 cut(s)	987, 1283
TaaI	ACNGT	5 cut(s)	164, 274, 622, 756, 1384
TaiI	ACGT	2 cut(s)	60, 1138
TaqI	TCGA	1 cut(s)	90
TasI	AATT	7 cut(s)	168, 352, 687, 712, 903, 1226, 1334
TatI	WGTACW	3 cut(s)	15, 119, 1101
TfiI	GAWTC	4 cut(s)	338, 490, 836, 1355
Tru1I	TTAA	3 cut(s)	282, 321, 1011
Tru9I	TTAA	3 cut(s)	282, 321, 1011
TscAI	CASTG	2 cut(s)	103, 487
TseFI	GTSAC	3 cut(s)	229, 482, 691
TseI	GCWGC	4 cut(s)	75, 572, 575, 611
Tsp45I	GTSAC	3 cut(s)	229, 482, 691
TspDTI	ATGAA	9 cut(s)	17, 78, 228, 407, 435, 537, 831, 912, 1250
TspGWI	ACGGA	1 cut(s)	964
TspMI	CCCGGG	1 cut(s)	738
TspRI	CASTG	2 cut(s)	103, 487
Vha464I	CTTAAG	1 cut(s)	320
VpaK11BI	GGWCC	3 cut(s)	637, 972, 1115
XapI	RAATTY	3 cut(s)	168, 352, 712
XceI	RCATGY	3 cut(s)	655, 775, 828
XcmI	CCANNNNNNNNNTGG	1 cut(s)	966
XmaI	CCCGGG	1 cut(s)	738
XspI	CTAG	1 cut(s)	1364
ZrmI	AGTACT	1 cut(s)	17
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.