Synaptonemal complex protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 4 cut(s) | 1078, 1218, 1630, 1697 |
| AcsI | RAATTY | 4 cut(s) | 288, 904, 1048, 1453 |
| AcuI | CTGAAG | 6 cut(s) | 266, 390, 435, 1004, 1154, 1181 |
| AfaI | GTAC | 4 cut(s) | 331, 501, 688, 1585 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 342, 1131, 1397, 1492 |
| AflIII | ACRYGT | 1 cut(s) | 204 |
| AjiI | CACGTC | 1 cut(s) | 1646 |
| AjnI | CCWGG | 1 cut(s) | 1604 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 338, 370 |
| Alw21I | GWGCWC | 1 cut(s) | 1355 |
| Alw26I | GTCTC | 3 cut(s) | 175, 385, 1686 |
| AlwI | GGATC | 4 cut(s) | 1078, 1218, 1630, 1697 |
| ApeKI | GCWGC | 4 cut(s) | 50, 719, 970, 1001 |
| ApoI | RAATTY | 4 cut(s) | 288, 904, 1048, 1453 |
| AseI | ATTAAT | 1 cut(s) | 834 |
| AspLEI | GCGC | 1 cut(s) | 1006 |
| AsuHPI | GGTGA | 2 cut(s) | 1380, 1673 |
| BbsI | GAAGAC | 2 cut(s) | 1010, 1369 |
| Bbv12I | GWGCWC | 1 cut(s) | 1355 |
| BbvI | GCAGC | 4 cut(s) | 37, 706, 982, 988 |
| BccI | CCATC | 2 cut(s) | 566, 877 |
| BciT130I | CCWGG | 1 cut(s) | 1606 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcoDI | GTCTC | 3 cut(s) | 175, 385, 1686 |
| BfaI | CTAG | 6 cut(s) | 503, 611, 729, 782, 966, 1394 |
| BglII | AGATCT | 1 cut(s) | 157 |
| BisI | GCNGC | 4 cut(s) | 51, 720, 971, 1002 |
| BlsI | GCNGC | 4 cut(s) | 52, 721, 972, 1003 |
| BmcAI | AGTACT | 1 cut(s) | 501 |
| Bme1390I | CCNGG | 1 cut(s) | 1606 |
| BmgBI | CACGTC | 1 cut(s) | 1646 |
| BmrFI | CCNGG | 1 cut(s) | 1606 |
| BmsI | GCATC | 3 cut(s) | 223, 716, 969 |
| BpiI | GAAGAC | 2 cut(s) | 1010, 1369 |
| BpmI | CTGGAG | 1 cut(s) | 890 |
| BpuEI | CTTGAG | 2 cut(s) | 32, 788 |
| BsaI | GGTCTC | 2 cut(s) | 385, 1686 |
| BsaJI | CCNNGG | 1 cut(s) | 1604 |
| BsaWI | WCCGGW | 1 cut(s) | 1366 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 342, 1131, 1397, 1492 |
| Bse1I | ACTGG | 2 cut(s) | 136, 1415 |
| BseBI | CCWGG | 1 cut(s) | 1606 |
| BseDI | CCNNGG | 1 cut(s) | 1604 |
| BseGI | GGATG | 1 cut(s) | 707 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 342, 1131, 1397, 1492 |
| BseMII | CTCAG | 4 cut(s) | 453, 501, 510, 1145 |
| BseNI | ACTGG | 2 cut(s) | 136, 1415 |
| BseRI | GAGGAG | 3 cut(s) | 1244, 1301, 1304 |
| BseXI | GCAGC | 4 cut(s) | 37, 706, 982, 988 |
| BsgI | GTGCAG | 2 cut(s) | 36, 182 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1355 |
| BsiSI | CCGG | 1 cut(s) | 1367 |
| BslFI | GGGAC | 1 cut(s) | 1517 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 342, 1131, 1397, 1492 |
| BsmAI | GTCTC | 3 cut(s) | 175, 385, 1686 |
| BsmFI | GGGAC | 1 cut(s) | 1517 |
| BsmI | GAATGC | 1 cut(s) | 956 |
| Bso31I | GGTCTC | 2 cut(s) | 385, 1686 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1355 |
| Bsp1407I | TGTACA | 1 cut(s) | 329 |
| Bsp143I | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| BspCNI | CTCAG | 4 cut(s) | 454, 502, 509, 1146 |
| BspPI | GGATC | 4 cut(s) | 1078, 1218, 1630, 1697 |
| BspTNI | GGTCTC | 2 cut(s) | 385, 1686 |
| BsrGI | TGTACA | 1 cut(s) | 329 |
| BsrI | ACTGG | 2 cut(s) | 136, 1415 |
| BssECI | CCNNGG | 1 cut(s) | 1604 |
| BssMI | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| Bst2UI | CCWGG | 1 cut(s) | 1606 |
| Bst4CI | ACNGT | 6 cut(s) | 186, 789, 816, 1067, 1428, 1564 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 979 |
| BstAUI | TGTACA | 1 cut(s) | 329 |
| BstC8I | GCNNGC | 2 cut(s) | 130, 596 |
| BstDEI | CTNAG | 6 cut(s) | 462, 496, 510, 1154, 1358, 1626 |
| BstEII | GGTNACC | 1 cut(s) | 1661 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1129 |
| BstF5I | GGATG | 1 cut(s) | 707 |
| BstHHI | GCGC | 1 cut(s) | 1006 |
| BstKTI | GATC | 6 cut(s) | 160, 193, 1086, 1213, 1625, 1705 |
| BstMAI | GTCTC | 3 cut(s) | 175, 385, 1686 |
| BstMBI | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 979 |
| BstNI | CCWGG | 1 cut(s) | 1606 |
| BstNSI | RCATGY | 4 cut(s) | 132, 208, 986, 1001 |
| BstPI | GGTNACC | 1 cut(s) | 1661 |
| BstSCI | CCNGG | 1 cut(s) | 1604 |
| BstV1I | GCAGC | 4 cut(s) | 37, 706, 982, 988 |
| BstV2I | GAAGAC | 2 cut(s) | 1010, 1369 |
| BstX2I | RGATCY | 4 cut(s) | 157, 1083, 1210, 1622 |
| BstYI | RGATCY | 4 cut(s) | 157, 1083, 1210, 1622 |
| BtrI | CACGTC | 1 cut(s) | 1646 |
| BtsCI | GGATG | 1 cut(s) | 707 |
| BtsI | GCAGTG | 1 cut(s) | 1265 |
| BtsIMutI | CAGTG | 6 cut(s) | 821, 1072, 1265, 1355, 1422, 1424 |
| Cac8I | GCNNGC | 2 cut(s) | 130, 596 |
| CfoI | GCGC | 1 cut(s) | 1006 |
| Csp6I | GTAC | 4 cut(s) | 330, 500, 687, 1584 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1241, 1276 |
| CviQI | GTAC | 4 cut(s) | 330, 500, 687, 1584 |
| DdeI | CTNAG | 6 cut(s) | 462, 496, 510, 1154, 1358, 1626 |
| DpnI | GATC | 6 cut(s) | 159, 192, 1085, 1212, 1624, 1704 |
| DpnII | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| DraI | TTTAAA | 2 cut(s) | 84, 1053 |
| Eco31I | GGTCTC | 2 cut(s) | 385, 1686 |
| Eco57I | CTGAAG | 6 cut(s) | 266, 390, 435, 1004, 1154, 1181 |
| Eco91I | GGTNACC | 1 cut(s) | 1661 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1129 |
| EcoO65I | GGTNACC | 1 cut(s) | 1661 |
| EcoRI | GAATTC | 1 cut(s) | 1453 |
| EcoRII | CCWGG | 1 cut(s) | 1604 |
| EcoT22I | ATGCAT | 2 cut(s) | 984, 1714 |
| FaqI | GGGAC | 1 cut(s) | 1517 |
| FauNDI | CATATG | 1 cut(s) | 1708 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 4 cut(s) | 51, 720, 971, 1002 |
| FokI | GGATG | 1 cut(s) | 694 |
| Fsp4HI | GCNGC | 4 cut(s) | 51, 720, 971, 1002 |
| FspBI | CTAG | 6 cut(s) | 503, 611, 729, 782, 966, 1394 |
| GlaI | GCGC | 1 cut(s) | 1005 |
| GluI | GCNGC | 4 cut(s) | 51, 720, 971, 1002 |
| GsuI | CTGGAG | 1 cut(s) | 890 |
| HapII | CCGG | 1 cut(s) | 1367 |
| HhaI | GCGC | 1 cut(s) | 1006 |
| Hin6I | GCGC | 1 cut(s) | 1004 |
| HinP1I | GCGC | 1 cut(s) | 1004 |
| HincII | GTYRAC | 2 cut(s) | 1422, 1640 |
| HindII | GTYRAC | 2 cut(s) | 1422, 1640 |
| HindIII | AAGCTT | 2 cut(s) | 170, 1193 |
| HinfI | GANTC | 6 cut(s) | 296, 434, 658, 962, 1385, 1687 |
| HpaII | CCGG | 1 cut(s) | 1367 |
| HphI | GGTGA | 2 cut(s) | 1380, 1673 |
| Hpy166II | GTNNAC | 5 cut(s) | 776, 1070, 1422, 1586, 1640 |
| Hpy188I | TCNGA | 8 cut(s) | 226, 285, 415, 445, 463, 1444, 1675, 1686 |
| Hpy8I | GTNNAC | 5 cut(s) | 776, 1070, 1422, 1586, 1640 |
| HpyAV | CCTTC | 7 cut(s) | 23, 313, 577, 1332, 1375, 1659, 1670 |
| HpyCH4III | ACNGT | 6 cut(s) | 186, 789, 816, 1067, 1428, 1564 |
| HpyCH4IV | ACGT | 1 cut(s) | 1645 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 979 |
| HpyF3I | CTNAG | 6 cut(s) | 462, 496, 510, 1154, 1358, 1626 |
| HpySE526I | ACGT | 1 cut(s) | 1645 |
| HspAI | GCGC | 1 cut(s) | 1004 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| LmnI | GCTCC | 3 cut(s) | 1291, 1369, 1400 |
| Lsp1109I | GCAGC | 4 cut(s) | 37, 706, 982, 988 |
| LweI | GCATC | 3 cut(s) | 223, 716, 969 |
| MaeI | CTAG | 6 cut(s) | 503, 611, 729, 782, 966, 1394 |
| MaeII | ACGT | 1 cut(s) | 1645 |
| MaeIII | GTNAC | 1 cut(s) | 1661 |
| MalI | GATC | 6 cut(s) | 159, 192, 1085, 1212, 1624, 1704 |
| MboI | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| MfeI | CAATTG | 2 cut(s) | 242, 1253 |
| MflI | RGATCY | 4 cut(s) | 157, 1083, 1210, 1622 |
| MhlI | GDGCHC | 1 cut(s) | 1355 |
| MlyI | GAGTC | 1 cut(s) | 305 |
| MmeI | TCCRAC | 2 cut(s) | 336, 1111 |
| Mph1103I | ATGCAT | 2 cut(s) | 984, 1714 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1179, 1565 |
| MspI | CCGG | 1 cut(s) | 1367 |
| MspR9I | CCNGG | 1 cut(s) | 1606 |
| MssI | GTTTAAAC | 1 cut(s) | 84 |
| MunI | CAATTG | 2 cut(s) | 242, 1253 |
| Mva1269I | GAATGC | 1 cut(s) | 956 |
| MvaI | CCWGG | 1 cut(s) | 1606 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 979 |
| NdeI | CATATG | 1 cut(s) | 1708 |
| NdeII | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| NmuCI | GTSAC | 1 cut(s) | 1661 |
| NsiI | ATGCAT | 2 cut(s) | 984, 1714 |
| NspI | RCATGY | 4 cut(s) | 132, 208, 986, 1001 |
| PaeI | GCATGC | 1 cut(s) | 132 |
| PciI | ACATGT | 1 cut(s) | 204 |
| PctI | GAATGC | 1 cut(s) | 956 |
| PfeI | GAWTC | 5 cut(s) | 434, 658, 962, 1385, 1687 |
| PkrI | GCNGC | 4 cut(s) | 52, 721, 972, 1003 |
| PleI | GAGTC | 1 cut(s) | 304 |
| PmeI | GTTTAAAC | 1 cut(s) | 84 |
| PpsI | GAGTC | 1 cut(s) | 304 |
| PscI | ACATGT | 1 cut(s) | 204 |
| PshBI | ATTAAT | 1 cut(s) | 834 |
| Psp6I | CCWGG | 1 cut(s) | 1604 |
| PspEI | GGTNACC | 1 cut(s) | 1661 |
| PspGI | CCWGG | 1 cut(s) | 1604 |
| PsuI | RGATCY | 4 cut(s) | 157, 1083, 1210, 1622 |
| RsaI | GTAC | 4 cut(s) | 331, 501, 688, 1585 |
| RsaNI | GTAC | 4 cut(s) | 330, 500, 687, 1584 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1179, 1565 |
| SatI | GCNGC | 4 cut(s) | 51, 720, 971, 1002 |
| Sau3AI | GATC | 6 cut(s) | 157, 190, 1083, 1210, 1622, 1702 |
| ScaI | AGTACT | 1 cut(s) | 501 |
| SchI | GAGTC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 1 cut(s) | 1606 |
| SduI | GDGCHC | 1 cut(s) | 1355 |
| SfaNI | GCATC | 3 cut(s) | 223, 716, 969 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1179, 1565 |
| SmlI | CTYRAG | 2 cut(s) | 11, 767 |
| SmoI | CTYRAG | 2 cut(s) | 11, 767 |
| SphI | GCATGC | 1 cut(s) | 132 |
| SspI | AATATT | 1 cut(s) | 1474 |
| SspMI | CTAG | 6 cut(s) | 503, 611, 729, 782, 966, 1394 |
| StyD4I | CCNGG | 1 cut(s) | 1604 |
| TaaI | ACNGT | 6 cut(s) | 186, 789, 816, 1067, 1428, 1564 |
| TaiI | ACGT | 1 cut(s) | 1648 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TatI | WGTACW | 4 cut(s) | 329, 499, 686, 1583 |
| TfiI | GAWTC | 5 cut(s) | 434, 658, 962, 1385, 1687 |
| TscAI | CASTG | 6 cut(s) | 821, 1072, 1265, 1355, 1422, 1431 |
| TseFI | GTSAC | 1 cut(s) | 1661 |
| TseI | GCWGC | 4 cut(s) | 50, 719, 970, 1001 |
| Tsp45I | GTSAC | 1 cut(s) | 1661 |
| TspDTI | ATGAA | 8 cut(s) | 29, 590, 671, 1152, 1158, 1466, 1484, 1527 |
| TspRI | CASTG | 6 cut(s) | 821, 1072, 1265, 1355, 1422, 1431 |
| VspI | ATTAAT | 1 cut(s) | 834 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1129 |
| XapI | RAATTY | 4 cut(s) | 288, 904, 1048, 1453 |
| XceI | RCATGY | 4 cut(s) | 132, 208, 986, 1001 |
| XspI | CTAG | 6 cut(s) | 503, 611, 729, 782, 966, 1394 |
| ZrmI | AGTACT | 1 cut(s) | 501 |
| Zsp2I | ATGCAT | 2 cut(s) | 984, 1714 |